Click here to switch to the map view.

The map label for this gene is ykgJ [H]

Identifier: 21241010

GI number: 21241010

Start: 284314

End: 284697

Strand: Reverse

Name: ykgJ [H]

Synonym: XAC0236

Alternate gene names: 21241010

Gene position: 284697-284314 (Counterclockwise)

Preceding gene: 21241014

Following gene: 21241005

Centisome position: 5.5

GC content: 67.97

Gene sequence:

>384_bases
ATGGCACACCCCTGCCTTACCTGCGGCGCCTGCTGCGCCTATTTCCGCGTCAGTTTCCATTGGAGCGAAGCCGATCCCGC
ATTGGGCGGCAGGGTGCCGATCGAGCTGACCGAGGCGCTACGCACGCATGAGCGGGCGATGCGCGGCACCTCGCAATCGC
AGCCGCGTTGTATCGCGCTGGACGCAGACATCGGTCGCTACAGCCGCTGCAGCATCCACGACCGCCGCCCGTCGTCCTGC
GCGGCCGTGCCGGCCTCGCTGGAATTCGGGCAGCGCAGTGCGCAATGCGATAAATCGCGCTTGGCGCATGGCCTGCACGC
GCTGACCGACGCCGATTGGGTGGGCGTGGACGATGCGCAACGCAATCCGCTGCCGGCGGTGTGA

Upstream 100 bases:

>100_bases
TCGCTAACCGGTCACCGCAGCACGCTACTTGTATCGCGGCGCGGTTCGGTCAAAATGCCGCGCTTCCCACGCGATTTCGC
CGCGCCAGGCCCGGCATTCC

Downstream 100 bases:

>100_bases
ACCGTAGCGCAGCACGCGTGTCGTGCTGGCAACAAGCTCAGCCGGCACATTGCCGGCATGACCGGTGCGCTGCATCGGGA
TCCACTTCAGGAATTTCAGC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTEALRTHERAMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSC
AAVPASLEFGQRSAQCDKSRLAHGLHALTDADWVGVDDAQRNPLPAV

Sequences:

>Translated_127_residues
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTEALRTHERAMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSC
AAVPASLEFGQRSAQCDKSRLAHGLHALTDADWVGVDDAQRNPLPAV
>Mature_126_residues
AHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTEALRTHERAMRGTSQSQPRCIALDADIGRYSRCSIHDRRPSSCA
AVPASLEFGQRSAQCDKSRLAHGLHALTDADWVGVDDAQRNPLPAV

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To A.calcoaceticus putative ferredoxin [H]

Homologues:

Organism=Escherichia coli, GI2367105, Length=106, Percent_Identity=47.1698113207547, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 13819; Mature: 13687

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTEALRTHERAMRGTSQSQPRCIAL
CCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
DADIGRYSRCSIHDRRPSSCAAVPASLEFGQRSAQCDKSRLAHGLHALTDADWVGVDDAQ
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
RNPLPAV
CCCCCCC
>Mature Secondary Structure 
AHPCLTCGACCAYFRVSFHWSEADPALGGRVPIELTEALRTHERAMRGTSQSQPRCIAL
CCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
DADIGRYSRCSIHDRRPSSCAAVPASLEFGQRSAQCDKSRLAHGLHALTDADWVGVDDAQ
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
RNPLPAV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]