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The map label for this gene is hemY

Identifier: 21240988

GI number: 21240988

Start: 262228

End: 263493

Strand: Reverse

Name: hemY

Synonym: XAC0214

Alternate gene names: NA

Gene position: 263493-262228 (Counterclockwise)

Preceding gene: 21240989

Following gene: 21240986

Centisome position: 5.09

GC content: 66.75

Gene sequence:

>1266_bases
ATGAAAGTGTTGCGTACCGTCTTGATTCTGCTGGTTGCCGTGGCGCTGGGCGTGCTCGGCGCACAGTGGCTATCGCACCA
GAACAGTTACGACCTTGGCAACGTCGTTGTCAGTGTGGGAGGTAACGACTATCACGCCGCCATGCCGCAGGCGCTGCTGA
TCCTGCTGATCGCCTTGCTGGTGCTGTGGTTGCTATGGACGTTGATCAGCCTGCCGTTCCGCGTGTGGGGCAAGTACCGC
CGCAACAAGGGCCGTGCGCGTTTGATCGAAGGTCTGCGCGCTGCCGATCATGGCCAATGGCAACGCGCCGAGCGGCTGCT
GGTCAGTGCCAGCGAAGACGACGAGGTGAGCGGCATTGCCCTGGCCAGCGCAGTGCGCGTGGCCGATGCGCGCGGCGACG
ATGCGGCGGCCACGGCACTTGCAAAGCAACTGGCCGAGCGCGACCCGACGGGATATGCGCTGTTGCAGGGCGAGCGGCAC
CTGGCGCGCCAGCGCCCGGTCGACGCAATCAATGCAGTGGATAGCGCCAACGCGCAGCCGTTGCCGGCACGCGGCCTGCT
GTTGCGCACCCACGCCCTGGCGCAGATCGGTCGCGCCGACGAAGCCTATGGCCAGCTCGGTGCGCTGCGTCAGCAGGCGG
TCTTGGCGCCCGATGCCTACAGCACGCTGGAAGCGACGCTGGCCGAGCAGACCCTGTTGCAGGCCAGCGACGCCAATGCA
CTGGCCGAGCGCTGGGAAGCATTGCCCAAAGCATTACGCACCACGCCGGCAGTGGTGGGCGCCTACGCGCAACGTGCGGC
CGTGCTGCATTGGGACGATGCCGCCGTGCACAGCCTGGAGCATGCGCTGGACGCGCAATGGGACGAATCGCTGGTGCGCC
TGTACGGCGTGCTGCCGCTGGAAAAATACGATTCGCGCCGCGCCAGCGCGCAGCGCTGGCTGACCCAATATCCCGACAGC
CCAGGGCTGTTGCTGACACTGGCGCGGCTCGCGCGTCAACAGCAGCAGTGGTCGCAGGCCGAGGAATTCCTGCATCGCGC
CATCGCAGGCGGCGCCGGCAGCGAGGCCTGGGAAGAACTGGGACACGGTTTTGGCGCCTCCGGCGACCTGCTGTCGGCAC
AGCATTGCTATGCCAATGCCTTGCGCGCCGCACGTGGCGAACCGGTGCAGGACCTCATGCCACGGCAGTCGTTGCGCGAG
CCGGTCATCACCACGTACGACCCCGCGCCAATCGATCCGCACGCAGCGGACGATCGCATCCTGTAG

Upstream 100 bases:

>100_bases
GCTTGCGCAGCCTGCAACAAGCGCCACTGCGTCCGCGCCTGCCGGAACTGGGCACCACCCTGCTGCAACTGCAGGCCATG
CGTGAAGGGAGATCCACCCA

Downstream 100 bases:

>100_bases
TGGAGACAGCGGCGGTATGCGATGTGCGTACCGCCGCATTGCACCCCCAAGAACAAGGCGAATGCTCGCCAAGTGGGCAT
CTACTCCTTCGAAGAAGTTG

Product: porphyrin biosynthesis protein

Products: NA

Alternate protein names: Transmembrane HemY Porphyrin Biosynthesis Protein; HemY Domain-Containing Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLWTLISLPFRVWGKYR
RNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIALASAVRVADARGDDAAATALAKQLAERDPTGYALLQGERH
LARQRPVDAINAVDSANAQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASDANA
LAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQWDESLVRLYGVLPLEKYDSRRASAQRWLTQYPDS
PGLLLTLARLARQQQQWSQAEEFLHRAIAGGAGSEAWEELGHGFGASGDLLSAQHCYANALRAARGEPVQDLMPRQSLRE
PVITTYDPAPIDPHAADDRIL

Sequences:

>Translated_421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLWTLISLPFRVWGKYR
RNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIALASAVRVADARGDDAAATALAKQLAERDPTGYALLQGERH
LARQRPVDAINAVDSANAQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASDANA
LAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQWDESLVRLYGVLPLEKYDSRRASAQRWLTQYPDS
PGLLLTLARLARQQQQWSQAEEFLHRAIAGGAGSEAWEELGHGFGASGDLLSAQHCYANALRAARGEPVQDLMPRQSLRE
PVITTYDPAPIDPHAADDRIL
>Mature_421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALLVLWLLWTLISLPFRVWGKYR
RNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIALASAVRVADARGDDAAATALAKQLAERDPTGYALLQGERH
LARQRPVDAINAVDSANAQPLPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASDANA
LAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQWDESLVRLYGVLPLEKYDSRRASAQRWLTQYPDS
PGLLLTLARLARQQQQWSQAEEFLHRAIAGGAGSEAWEELGHGFGASGDLLSAQHCYANALRAARGEPVQDLMPRQSLRE
PVITTYDPAPIDPHAADDRIL

Specific function: Unknown

COG id: COG3071

COG function: function code H; Uncharacterized enzyme of heme biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45834; Mature: 45834

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLWLLWTLISLPFRVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
LASAVRVADARGDDAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINAVDSANAQP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCC
LPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASDANA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
LAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQWDESLVRLYGVLPL
HHHHHHHHHHHHHHCHHHHHHHHHHHEEEECCHHHHHHHHHHHHCHHHHHHHHHHHCCCH
EKYDSRRASAQRWLTQYPDSPGLLLTLARLARQQQQWSQAEEFLHRAIAGGAGSEAWEEL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GHGFGASGDLLSAQHCYANALRAARGEPVQDLMPRQSLREPVITTYDPAPIDPHAADDRI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCEECCCCCCCCCCCCCCCC
L
C
>Mature Secondary Structure
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYHAAMPQALLILLIALL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLWLLWTLISLPFRVWGKYRRNKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
LASAVRVADARGDDAAATALAKQLAERDPTGYALLQGERHLARQRPVDAINAVDSANAQP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCC
LPARGLLLRTHALAQIGRADEAYGQLGALRQQAVLAPDAYSTLEATLAEQTLLQASDANA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
LAERWEALPKALRTTPAVVGAYAQRAAVLHWDDAAVHSLEHALDAQWDESLVRLYGVLPL
HHHHHHHHHHHHHHCHHHHHHHHHHHEEEECCHHHHHHHHHHHHCHHHHHHHHHHHCCCH
EKYDSRRASAQRWLTQYPDSPGLLLTLARLARQQQQWSQAEEFLHRAIAGGAGSEAWEEL
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GHGFGASGDLLSAQHCYANALRAARGEPVQDLMPRQSLREPVITTYDPAPIDPHAADDRI
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCEECCCCCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA