| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238319
Identifier: 57238319
GI number: 57238319
Start: 1356885
End: 1357754
Strand: Reverse
Name: 57238319
Synonym: CJE1460
Alternate gene names: NA
Gene position: 1357754-1356885 (Counterclockwise)
Preceding gene: 57238320
Following gene: 57238318
Centisome position: 76.37
GC content: 26.9
Gene sequence:
>870_bases ATGACTATAATTAAACCTTTAGAATTTGAAGTTTTACAAAATTTAGCTAAAAAAGATGAAACGCCTTTATGGGATAAGGA AGTAAGTTATAAAAATAATGAAAAAGTGCAATTTAAAGGTTTTGTTTGGGTAAGTGCAAGTGATGAAGATACGCATGAAG AACCTGATGTGTATTTTGATAAATGGGTTAAATTTGCACCCATCAATGAAAATGCTTTTTTTGATGATGAATTAAATACT CAAACAAAATGCGATAAAGCTTGGAGTGTAAAATTGAAAGTAGATGGGGTATTTGATACTTTAGCATTTTTAAATTTAGA TGTTTCAAAAATAAAGATAGAAACATTAGATGGCAAAATCATTTATGAAAAATCAATGTATTATAAAAAATCTCGCACTT GGTGGGAATATTTTTTTAGCAAATTTAAAGTCAATAAAGAAGATTTTGTGTTTTTACCTTATCCTATTAACTCAGAAATT TTAATAAGTTTTGAGCCTGCTAAAATAGGGTGTAATGTAGGACATATTTTAATAGGAAAAAAAGAATTTGCAGGTGTTAC AATCTATCCTGCAAATAGCACTTATATAAATTACTCAAAAACTTCAACAAATGAATGGGGAGTAACAAATGTAGTAACTG GTAAGAAAGCAAAATACTTAGAATTTATAGTTGCTGTAGAAAAAAAAGACTTTGATTATTATGATGATTTAATAGCAGGA CTTTATAATACTAAAGCCTTATTTATAGGAGATGAAAGCGAATTGGGCTTTAAAAAATTAACTACTTTTGGAATTTTAAA AGATTATTCTGCACCTTTAGAGGATCAAGATTATATGCAATATAAACTAAATATTCAAGGTTTGATTTAA
Upstream 100 bases:
>100_bases TGACAATGTAGATAAAAGTGTAAAAAGAGCAAATATGGATTTAAGTATTTTAACTAAACAAACTAGAGAAATTGCAGAAA ATATTTAATAAGGAAAGAAG
Downstream 100 bases:
>100_bases AAAATAAAAAATATCTTCTAACACGCACTTTAACGCCTTAAAAATTTTCTAAAATCCTTATAAAACTTCAAAAAAGGATT TTAAAATGAGTTTTAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTIIKPLEFEVLQNLAKKDETPLWDKEVSYKNNEKVQFKGFVWVSASDEDTHEEPDVYFDKWVKFAPINENAFFDDELNT QTKCDKAWSVKLKVDGVFDTLAFLNLDVSKIKIETLDGKIIYEKSMYYKKSRTWWEYFFSKFKVNKEDFVFLPYPINSEI LISFEPAKIGCNVGHILIGKKEFAGVTIYPANSTYINYSKTSTNEWGVTNVVTGKKAKYLEFIVAVEKKDFDYYDDLIAG LYNTKALFIGDESELGFKKLTTFGILKDYSAPLEDQDYMQYKLNIQGLI
Sequences:
>Translated_289_residues MTIIKPLEFEVLQNLAKKDETPLWDKEVSYKNNEKVQFKGFVWVSASDEDTHEEPDVYFDKWVKFAPINENAFFDDELNT QTKCDKAWSVKLKVDGVFDTLAFLNLDVSKIKIETLDGKIIYEKSMYYKKSRTWWEYFFSKFKVNKEDFVFLPYPINSEI LISFEPAKIGCNVGHILIGKKEFAGVTIYPANSTYINYSKTSTNEWGVTNVVTGKKAKYLEFIVAVEKKDFDYYDDLIAG LYNTKALFIGDESELGFKKLTTFGILKDYSAPLEDQDYMQYKLNIQGLI >Mature_288_residues TIIKPLEFEVLQNLAKKDETPLWDKEVSYKNNEKVQFKGFVWVSASDEDTHEEPDVYFDKWVKFAPINENAFFDDELNTQ TKCDKAWSVKLKVDGVFDTLAFLNLDVSKIKIETLDGKIIYEKSMYYKKSRTWWEYFFSKFKVNKEDFVFLPYPINSEIL ISFEPAKIGCNVGHILIGKKEFAGVTIYPANSTYINYSKTSTNEWGVTNVVTGKKAKYLEFIVAVEKKDFDYYDDLIAGL YNTKALFIGDESELGFKKLTTFGILKDYSAPLEDQDYMQYKLNIQGLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33582; Mature: 33450
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIKPLEFEVLQNLAKKDETPLWDKEVSYKNNEKVQFKGFVWVSASDEDTHEEPDVYFD CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCE KWVKFAPINENAFFDDELNTQTKCDKAWSVKLKVDGVFDTLAFLNLDVSKIKIETLDGKI EEEEEEECCCCCEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEEECCEE IYEKSMYYKKSRTWWEYFFSKFKVNKEDFVFLPYPINSEILISFEPAKIGCNVGHILIGK EEECCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEECCCCCEEEEEC KEFAGVTIYPANSTYINYSKTSTNEWGVTNVVTGKKAKYLEFIVAVEKKDFDYYDDLIAG HHHCCEEEEECCCCEEEEECCCCCCCCCEEEECCCCHHEEEEEEEEECCCCCHHHHHHHH LYNTKALFIGDESELGFKKLTTFGILKDYSAPLEDQDYMQYKLNIQGLI HHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure TIIKPLEFEVLQNLAKKDETPLWDKEVSYKNNEKVQFKGFVWVSASDEDTHEEPDVYFD CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCE KWVKFAPINENAFFDDELNTQTKCDKAWSVKLKVDGVFDTLAFLNLDVSKIKIETLDGKI EEEEEEECCCCCEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEEECCEE IYEKSMYYKKSRTWWEYFFSKFKVNKEDFVFLPYPINSEILISFEPAKIGCNVGHILIGK EEECCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCEECCCCCEEEEEC KEFAGVTIYPANSTYINYSKTSTNEWGVTNVVTGKKAKYLEFIVAVEKKDFDYYDDLIAG HHHCCEEEEECCCCEEEEECCCCCCCCCEEEECCCCHHEEEEEEEEECCCCCHHHHHHHH LYNTKALFIGDESELGFKKLTTFGILKDYSAPLEDQDYMQYKLNIQGLI HHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA