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The map label for this gene is 57238171

Identifier: 57238171

GI number: 57238171

Start: 1343075

End: 1343806

Strand: Reverse

Name: 57238171

Synonym: CJE1435

Alternate gene names: NA

Gene position: 1343806-1343075 (Counterclockwise)

Preceding gene: 57238172

Following gene: 57238170

Centisome position: 75.59

GC content: 30.6

Gene sequence:

>732_bases
ATGAATTTAGAACTTTTTAAAAAAGATGAAAATAAAGAAATAAGCTTAACTTCTTTGGAAATAGCAGAGCTTACAGGCAA
GGAGCATTTTCATGTTATAAGAGATATAGAAACTTACTTAGAAAAAGTGGTTGAAGGGGGTATATCCAAATTTGGAGACA
CCTACCAAAACACACAAAATAAGCAATCTTACAAGTATTATCGCTTACCAAAAAGAGAAGTATTGATTTTAGTGAGTGGG
TATAGCGTAGAACTAAGAGCAAAGATAATCGATAGATTAGAATACTTAGAAAATGAGCTTAAAAAACAAAGTTATAAACC
GCTTTCATTAAAAGAAAGTTTGCAAATGCAATTAGAGCTTTTAGAAAAAAATGAAAAACTTCAAGTAGAAAATCAAAGCC
TAAAAAACGAAGCCGAACAAAATGCACCTTTAATTCATTTTGCAAATCGCATTCAAAACACAAATGATGCTATTTTGATA
AGAGATTACGCAAAAATCTTACACGAAAAAAATAATCTTGAAATTGGCGAGAAAAGACTTTTTAAGATCTTGCGTGAAAA
AGGATTTTTAATGAGTGATAATAAACCTTATCAAAAATACATCGAACAAGGACTTTTTAAGGTAAGTGAAACGACTGTTA
GCACCATTAATGGCGATAGACTTGTAAGCACGACAAAAATAACAGGTAAAGGGCAAATAGCCATTTTAAAAGCGATTTTG
AAAGCAAGTTGA

Upstream 100 bases:

>100_bases
TTAAAGTCCTCAAATTTATTTATTTCTTCTTAAATTAAGCCATCTTTTAAGATGGCTCTTAAGTCTTCATTTAAACACTA
AAAAATTTTAAGGAGAATAA

Downstream 100 bases:

>100_bases
TATAGATTTAAGCGAATATGGAGACAATGAAACTTTTAAAGATGAAATTCAAATGCCAAGCGATAGAGTTGAAATAGAAC
TATTTACAGGATTTTACGAT

Product: DNA-binding protein Roi

Products: NA

Alternate protein names: Roi Protein; Phage Regulatory Protein Rha Family; Bacteriophage Antirepressor; Phage-Related Antirepressor; Phage Regulatory Protein Rha-Like Protein; Host Killing Protein; Phage-Related Protein; Antirepressor; Phage Antirepressor

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQNKQSYKYYRLPKREVLILVSG
YSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLELLEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILI
RDYAKILHEKNNLEIGEKRLFKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAIL
KAS

Sequences:

>Translated_243_residues
MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQNKQSYKYYRLPKREVLILVSG
YSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLELLEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILI
RDYAKILHEKNNLEIGEKRLFKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAIL
KAS
>Mature_243_residues
MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQNKQSYKYYRLPKREVLILVSG
YSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLELLEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILI
RDYAKILHEKNNLEIGEKRLFKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAIL
KAS

Specific function: Unknown

COG id: COG3645

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28198; Mature: 28198

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQN
CCCCEEECCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
KQSYKYYRLPKREVLILVSGYSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLEL
CCCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILIRDYAKILHEKNNLEIGEKRL
HHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCHHHH
FKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAIL
HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHH
KAS
HCC
>Mature Secondary Structure
MNLELFKKDENKEISLTSLEIAELTGKEHFHVIRDIETYLEKVVEGGISKFGDTYQNTQN
CCCCEEECCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
KQSYKYYRLPKREVLILVSGYSVELRAKIIDRLEYLENELKKQSYKPLSLKESLQMQLEL
CCCCCEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LEKNEKLQVENQSLKNEAEQNAPLIHFANRIQNTNDAILIRDYAKILHEKNNLEIGEKRL
HHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCHHHH
FKILREKGFLMSDNKPYQKYIEQGLFKVSETTVSTINGDRLVSTTKITGKGQIAILKAIL
HHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHH
KAS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA