| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238151
Identifier: 57238151
GI number: 57238151
Start: 1332261
End: 1333493
Strand: Reverse
Name: 57238151
Synonym: CJE1415
Alternate gene names: NA
Gene position: 1333493-1332261 (Counterclockwise)
Preceding gene: 57238152
Following gene: 57238150
Centisome position: 75.01
GC content: 33.9
Gene sequence:
>1233_bases ATGAAAAGATTTCGCTTGAGTTTTTACTTGAGTTTTTTAACTCTTTTGCTTAGTGCTTGTAGTGTTTCGCAAATGAATTC GCTAGTTTCAAGCAAAGAGCCTGCTGTAAATGAGAGCTTGCCAAAGGTTGAAAGTTTAAAAAATCTTAGTGATATGAGTA ACATTGCTTTTGAATGGGAGCCTTTATATAATGAAAATATCAAAGGATTTTATCTGTATCGTTCTAGCGATGAAAATCCT GATTTTAAACTTGTAGGTACTATTAAAGATAAGTTTCAAACTCATTATGTAGATACTAAATTAGAGCCTGGTACTAAGTA TCGTTATATGATGAAAAGCTTTAATGAACAAGGACAAATTTCAGAAGATGGCAAGGTTATAGAAGTGAGCACAGCTCCAA GACTTGAAGCTGTTCCTTTTGTTCAAGCTGTGACTAATTTGCCTAATCGTATTAAACTTATTTGGCGTCCGCATCCTGAT TTTAGGGTTGATTCTTATATTATTGAAAGAACCAAAGGTGATGATAAAGAATTTAAAAAAATTGCAGAAGTAAAAAATCG TTTAAACGCTGAATACATCGATAGTGATTTAAAACCTAATGAAAATTCAAGTTATAGAATTATTGCTGTGAGTTTTAATG GGATAAAGAGTGAGCCAAGTCAAGTTGTAAGTTCTACAAGCAAGGCTTTACCTCCTCAAGTTGAGCATTTAAGTGCTAGT ACAGATGGTTCTAATAAAATCATTTTAACTTGGGATGCTCCTACGTATGAAGATTTTTCTTATTATAAAGTTTATTCTAC GAGCTCAAGTTTCCTTCCTTTTAGTGTTTTGGCAAAGACTGATAAAAATTCTTATGAGGATATAGTAGAAGGAGCAGGTA AAAGCAAGTATTATAAAGTAACAATGGTCGATAAAGATGGTCTTGAAAGTCCTATGCCAAAAGATGGTGTAGAAGGTAAA ACTTTAGGCAACCCTTTGGCTCCTAGTATTATTTTGACCCAAAGCACAAGTGAAGGGATAAATTTAGAATGGAGTGATAA TGATACTAGAGCTGTTGAGTATGAAATAAGACGCTATGGTGGGGAGCAAAATGCAGTTTTTAAAGGGATTAAAGAAAAGC GATTAAAAGATGTAAAAGCTTTACCAGGGGTGGAATATAGTTATGAAGTTATTGCTATTGATTCAGCTGGACTTCGTTCA GAACCTTCAAGCAAAGTTAAGGCGGCTCAGTAG
Upstream 100 bases:
>100_bases TTTATCCATCCAAAAACCAAAGAGCAAATTTTTGTTAAAGCACCTTTGATGGAAGATTTTAAAAATATTATGTTTGAACA AATTAATTTAGGAGAGAATG
Downstream 100 bases:
>100_bases TGCCAAATTTTAAAAGTAAAAAGATCAAAGAAATAAATCTGCCTTATAGTAAGGATGATGTTGAATTTCTTTGGCTTGCT AAGAATGATAATGTTAGTCT
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Fibronectin Type III; Diaminopimelate Decarboxylase Dap Decarboxylase; Fibronectin Domain Containing Protein
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKRFRLSFYLSFLTLLLSACSVSQMNSLVSSKEPAVNESLPKVESLKNLSDMSNIAFEWEPLYNENIKGFYLYRSSDENP DFKLVGTIKDKFQTHYVDTKLEPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHPD FRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSEPSQVVSSTSKALPPQVEHLSAS TDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGK TLGNPLAPSIILTQSTSEGINLEWSDNDTRAVEYEIRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRS EPSSKVKAAQ
Sequences:
>Translated_410_residues MKRFRLSFYLSFLTLLLSACSVSQMNSLVSSKEPAVNESLPKVESLKNLSDMSNIAFEWEPLYNENIKGFYLYRSSDENP DFKLVGTIKDKFQTHYVDTKLEPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHPD FRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSEPSQVVSSTSKALPPQVEHLSAS TDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGK TLGNPLAPSIILTQSTSEGINLEWSDNDTRAVEYEIRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRS EPSSKVKAAQ >Mature_410_residues MKRFRLSFYLSFLTLLLSACSVSQMNSLVSSKEPAVNESLPKVESLKNLSDMSNIAFEWEPLYNENIKGFYLYRSSDENP DFKLVGTIKDKFQTHYVDTKLEPGTKYRYMMKSFNEQGQISEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHPD FRVDSYIIERTKGDDKEFKKIAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSEPSQVVSSTSKALPPQVEHLSAS TDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYEDIVEGAGKSKYYKVTMVDKDGLESPMPKDGVEGK TLGNPLAPSIILTQSTSEGINLEWSDNDTRAVEYEIRRYGGEQNAVFKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRS EPSSKVKAAQ
Specific function: Unknown
COG id: COG3401
COG function: function code R; Fibronectin type 3 domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281359867, Length=320, Percent_Identity=25.3125, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI281359863, Length=320, Percent_Identity=25.3125, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI281359861, Length=320, Percent_Identity=25.3125, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24639790, Length=320, Percent_Identity=25.3125, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI281359865, Length=320, Percent_Identity=25.3125, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24639792, Length=320, Percent_Identity=25.3125, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46202; Mature: 46202
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFRLSFYLSFLTLLLSACSVSQMNSLVSSKEPAVNESLPKVESLKNLSDMSNIAFEWE CCEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEE PLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKLEPGTKYRYMMKSFNEQGQI CCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCC SEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHPDFRVDSYIIERTKGDDKEFKK CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHH IAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSEPSQVVSSTSKALPPQVEHLSAS HHHHHHHCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCC TDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYEDIVEGAGKSKYYKV CCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE TMVDKDGLESPMPKDGVEGKTLGNPLAPSIILTQSTSEGINLEWSDNDTRAVEYEIRRYG EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEHHHHCC GEQNAVFKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRSEPSSKVKAAQ CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKRFRLSFYLSFLTLLLSACSVSQMNSLVSSKEPAVNESLPKVESLKNLSDMSNIAFEWE CCEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCEEEEE PLYNENIKGFYLYRSSDENPDFKLVGTIKDKFQTHYVDTKLEPGTKYRYMMKSFNEQGQI CCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCC SEDGKVIEVSTAPRLEAVPFVQAVTNLPNRIKLIWRPHPDFRVDSYIIERTKGDDKEFKK CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHH IAEVKNRLNAEYIDSDLKPNENSSYRIIAVSFNGIKSEPSQVVSSTSKALPPQVEHLSAS HHHHHHHCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHCCCC TDGSNKIILTWDAPTYEDFSYYKVYSTSSSFLPFSVLAKTDKNSYEDIVEGAGKSKYYKV CCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE TMVDKDGLESPMPKDGVEGKTLGNPLAPSIILTQSTSEGINLEWSDNDTRAVEYEIRRYG EEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEHHHHCC GEQNAVFKGIKEKRLKDVKALPGVEYSYEVIAIDSAGLRSEPSSKVKAAQ CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA