| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is trmB [H]
Identifier: 57238150
GI number: 57238150
Start: 1331083
End: 1332261
Strand: Reverse
Name: trmB [H]
Synonym: CJE1414
Alternate gene names: 57238150
Gene position: 1332261-1331083 (Counterclockwise)
Preceding gene: 57238151
Following gene: 57238149
Centisome position: 74.94
GC content: 27.82
Gene sequence:
>1179_bases GTGCCAAATTTTAAAAGTAAAAAGATCAAAGAAATAAATCTGCCTTATAGTAAGGATGATGTTGAATTTCTTTGGCTTGC TAAGAATGATAATGTTAGTCTTATTTATACAAAGGTTCAAGAAGAGAGTTTTTTTCTGCAGATTAAAAAAGCACAAAATG GTTTTGTGATTAAAGGCGATAAACATACAAAACCTTCTAAAATAGGTTATTTGCAAAAGGCTTTAAAAATCTTTAAAGAA GGTTTTTGTGAGGATATTATCAATGAAGCTTTTGGACTTAAAAACAATGCTTTAATTGAAAAAACACCATTTATCGTTGA CAATTTTGATGAGCTTTTGTCTAGGCTTCAAGGTAAAATTTATATAGAAATAGGCTTTGGATCAGGAAGACATTTGCTTT ATCAAGCAAAAGAAAATCCAAATGTTTTAATTTTAGGGGTGGAAATTTACAACCCAGCTTTAACTCAAGTGGCTAAACTT GCTAAAGCACAAAATGTAAATAATATTTTGCTAATCCAAAGTGATGCGAGATTGTTATTGAGTGTATTAAAATCAAAATC AGTTGAAAAGATTTTTCTACATTTTCCTGTTCCTTGGGACAAAAAGCCTCATAGGCGAGTTATTGGGAAAGATTTTTGCA AAGAATGTGCTAGGGTTTTAACCCAAAATGGTCGTTTTGAACTTAGAACAGATAGTTTTGAGTATTTTAATTTTACTCTA GAACAATTTTTGACTTTTCCTGTTCCAAAATTTAGTCTTAGAAAAAATGAAAATTTAGAAATTTCAAGCAAATATGAAGA TAGATGGAAAAAGCAAGAAAAAAATATATATGATCTTTGGGTGTGGAATTTTAACCAAGAGTGTAAAAACTATGAGTTAA ATGAATTTAATCTCTCATCGGTTGAATTTTCTAAAGAGGATTTGAAAAAAATAGAGCAGAACTTTAAAAATATTACTATA AAAAAAGATGATTTTTTCTTGCATTTTGAAAGCATCTATAAACAAGATGAGAATTTGCTTTTAAAGGTTGCTTTTGGAGC TTTTAATAAGCCTGAACATTGTTATTTGCATCTTGATAAAACGATTGATTTTGCTTTTAAAGAGCCATTTAAAATTCAAG AAAATATTAAAGCGATAAATGAATTAAAAGAAATTTTAAAAGTTCAGTTTAAAATATAA
Upstream 100 bases:
>100_bases TAAAAGCTTTACCAGGGGTGGAATATAGTTATGAAGTTATTGCTATTGATTCAGCTGGACTTCGTTCAGAACCTTCAAGC AAAGTTAAGGCGGCTCAGTA
Downstream 100 bases:
>100_bases TTTTTCTTGAAAATTAAGCAAAAATAAAGCATAATTTAAAAATTTAAAAAGGGAAATTAAGGAAAAAGGATGCCTAATTT AATCCAAGCAAATAAACTTA
Product: tRNA (guanine-N(7)-)-methyltransferase
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESFFLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKE GFCEDIINEAFGLKNNALIEKTPFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL AKAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLTQNGRFELRTDSFEYFNFTL EQFLTFPVPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITI KKDDFFLHFESIYKQDENLLLKVAFGAFNKPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKVQFKI
Sequences:
>Translated_392_residues MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESFFLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKE GFCEDIINEAFGLKNNALIEKTPFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKL AKAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLTQNGRFELRTDSFEYFNFTL EQFLTFPVPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITI KKDDFFLHFESIYKQDENLLLKVAFGAFNKPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKVQFKI >Mature_391_residues PNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESFFLQIKKAQNGFVIKGDKHTKPSKIGYLQKALKIFKEG FCEDIINEAFGLKNNALIEKTPFIVDNFDELLSRLQGKIYIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKLA KAQNVNNILLIQSDARLLLSVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLTQNGRFELRTDSFEYFNFTLE QFLTFPVPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWVWNFNQECKNYELNEFNLSSVEFSKEDLKKIEQNFKNITIK KDDFFLHFESIYKQDENLLLKVAFGAFNKPEHCYLHLDKTIDFAFKEPFKIQENIKAINELKEILKVQFKI
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Escherichia coli, GI1789330, Length=186, Percent_Identity=26.3440860215054, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4 [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 46215; Mature: 46084
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESFFLQIKKAQNGFVIKGD CCCCCCCCEEEECCCCCCCCEEEEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEECC KHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKTPFIVDNFDELLSRLQGKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCHHHHHHHCCCEE YIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKLAKAQNVNNILLIQSDARLLL EEEEECCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHH SVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLTQNGRFELRTDSFEYFNFTL HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH EQFLTFPVPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWVWNFNQECKNYELNEFNLSS HHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCC VEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYKQDENLLLKVAFGAFNKPEHCYLHLDK CCCCHHHHHHHHHHHHEEEEECCCEEEEEHHHHCCCCCEEEEEEECCCCCCCEEEEEEEC TIDFAFKEPFKIQENIKAINELKEILKVQFKI EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PNFKSKKIKEINLPYSKDDVEFLWLAKNDNVSLIYTKVQEESFFLQIKKAQNGFVIKGD CCCCCCCEEEECCCCCCCCEEEEEEEECCCEEEEEEEECCCEEEEEEEECCCCEEEECC KHTKPSKIGYLQKALKIFKEGFCEDIINEAFGLKNNALIEKTPFIVDNFDELLSRLQGKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEECCHHHHHHHCCCEE YIEIGFGSGRHLLYQAKENPNVLILGVEIYNPALTQVAKLAKAQNVNNILLIQSDARLLL EEEEECCCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCHHHHH SVLKSKSVEKIFLHFPVPWDKKPHRRVIGKDFCKECARVLTQNGRFELRTDSFEYFNFTL HHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH EQFLTFPVPKFSLRKNENLEISSKYEDRWKKQEKNIYDLWVWNFNQECKNYELNEFNLSS HHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCC VEFSKEDLKKIEQNFKNITIKKDDFFLHFESIYKQDENLLLKVAFGAFNKPEHCYLHLDK CCCCHHHHHHHHHHHHEEEEECCCEEEEEHHHHCCCCCEEEEEEECCCCCCCEEEEEEEC TIDFAFKEPFKIQENIKAINELKEILKVQFKI EEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA