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The map label for this gene is rbn [C]

Identifier: 57238083

GI number: 57238083

Start: 1261602

End: 1262408

Strand: Reverse

Name: rbn [C]

Synonym: CJE1346

Alternate gene names: 57238083

Gene position: 1262408-1261602 (Counterclockwise)

Preceding gene: 57238084

Following gene: 57238079

Centisome position: 71.01

GC content: 26.77

Gene sequence:

>807_bases
GTGAAAAATTTTTTTACTATTTTACTAAATTTGCGTGATAAGGAAATTTTAAATTATGCAGCAGCGCTTAGTTTTTATAC
TGTATTATCTTTAATACCTATTTTATTTGTATGTTTTTCTGTTTTTACGCAAATTTCCAGTTTTAAAGCTTATTATGAAA
AAGCAAAGCAAGTAATTTTTGCTTTTTTAATACCAACGCAACAAGATGTTGTTGCTACCTACATCGATACTTTTTTAAAA
AATAGTGTAAATTTGGGTATTGTAGGTCTTATTGCTATGGCATTTACTTCTTTAGCTTTTTTTTCAGGCTATGATTTTGT
AATCAATCGCATTACTAAAAATGAACCTAAAGGACTTTGGCAAAGTATTAGTTCTTATTGGACTCTTTTAACTCTTGTTC
CTTTGGGGCTTGGGCTTAGTTTTTATATTTCAGGTTTTATCCAACAAACTTTAGATGATTATAAAATAGGGTTTAATTTT
TTTGAAATTTTACCCTTTGTAATTATTTGGGGTTTATTTTTTATATCTTATTCAAGTTCTGTTCATAAGGGAACTCTTAA
AAGTTTAGCTTTAGTATCTTTTGGAGCGGGTACTATTTGGTATATAGGAAAAAATTTATTTGTATATTACGTGGTATATA
ATAAAACATACGCTAGCGTTTATGGATCTTTTTCTACTATTTTATTCTTTTTTATTTGGATTTATATTTCTTGGATTATT
TATCTTTTTGGGCTTAAACTCTATTATTTTCTAAATCACAATCATAATGAAGGGAATAAAATTCGCAAAAATACAAAGAA
AAGCTAG

Upstream 100 bases:

>100_bases
TTTAGCTTTTTCTGAAGCCGAAATGAATTTAATGAGAAATATTAAAAAAGCTTTTGATCCAAATAATATACTAAATCCTT
TTAAAATGGGACTTTAGAAG

Downstream 100 bases:

>100_bases
ATATTTAAATCGCACAGAGATTAAAGAAGCAATAAGATAACTTATAAAAATCCAAAATGGGATATGGATATTAGTTCCAT
AAATTTTAAATTTAAAAAAT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLK
NSVNLGIVGLIAMAFTSLAFFSGYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYASVYGSFSTILFFFIWIYISWII
YLFGLKLYYFLNHNHNEGNKIRKNTKKS

Sequences:

>Translated_268_residues
MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLK
NSVNLGIVGLIAMAFTSLAFFSGYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYASVYGSFSTILFFFIWIYISWII
YLFGLKLYYFLNHNHNEGNKIRKNTKKS
>Mature_268_residues
MKNFFTILLNLRDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYYEKAKQVIFAFLIPTQQDVVATYIDTFLK
NSVNLGIVGLIAMAFTSLAFFSGYDFVINRITKNEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNF
FEILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYASVYGSFSTILFFFIWIYISWII
YLFGLKLYYFLNHNHNEGNKIRKNTKKS

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=266, Percent_Identity=27.0676691729323, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 30930; Mature: 30930

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCCHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA