| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is pglI [C]
Identifier: 57238009
GI number: 57238009
Start: 1186952
End: 1187881
Strand: Reverse
Name: pglI [C]
Synonym: CJE1270
Alternate gene names: 57238009
Gene position: 1187881-1186952 (Counterclockwise)
Preceding gene: 57238010
Following gene: 57238008
Centisome position: 66.82
GC content: 29.25
Gene sequence:
>930_bases ATGCCTAAACTTTCTGTTATAGTACCAACTTTTAATCGTCAAGTTTTACTAGAAAAGGCTATTAAAAGCATACAAAATCA AGATTTTAAAGATTTAGAAATTATTGTAAGCGATGATAATTCTAGCGATGATACTAAAAGTGTGGTGCAAAATTTACAAA AAGATGATGATCGCATTAAGTATTTTTTAAATCAAAATTACAAACAAGGCCCAAATGGCAATAAAAATAATGGCTTAGAT CAAGCAAGTGGCGAGTTTGTAACTTTTTTAGATGATGATGATGAGCTTTTATCTGGGGCTTTAAGTACCTTGATGCAAAA AGCAAATGAGGGTTATGCTCATGTTTTTGGAAATTGTTTGATAGAAAAAGAAGGAAATTTAAGCAAGGAATTTAGCGGTA AGGGCTTGGAAAAAGATAGTGAAATTTCTAAAAAAGATTTTTTAATGGTTAAATTTAGCGGAGAGTTTTTTTCTGTTTTT AAAAAATCTCTACTTGAAAACCAGCGTTTTAATGAAGAATTTTATGGCAATGAAGCCACGCTTTGGGTAAATTTATACAA GGAAAAAAGTTTTTATATCCATAAGGCTTTTAGGATTTATAGGATTTTTAGGCAAGATAGCGTGACTTTAGGGGCGAGTA AAAATGCTCATAGGGTATATTTGGGATATTTAGAGCTTGCTAAAATTTTAGAAAATGAACTTAGAATGAGTAAGGATAAA GATTATAAAAAAACTTGTGCGAGTTATTATAAAATGGCAGCTTATTATGCAAAACTTGCAAAAAATTATAAAGCTCTTTA TAAGTGTTTGTTTAAAAGCTTGAGTATAAAAATCAACGCTCCTGCTTTGATATTACTCATTTTAAGTATAATTCCAAATA ATATGATTGAAAAATTATCAAAAATTCGGGTGGCTTTATGCAAAAATTAG
Upstream 100 bases:
>100_bases TTTAGAAAAGAACTTGTAAATAATGCCAAACAAAGGTGTAAAGACTTTGAAATTTCTCATATCAAAGAAGAATGGCTTAA GCTTATAGCTGAGGTTAAAA
Downstream 100 bases:
>100_bases GCATTTTTATTTATTCTTTAGGAAGTGGTGGTGCTGAAAGAGTTGTGGCGACTTTATTGCCTATTTTAAGTTTGAAATTT GAAGTGCATTTGATCTTGAT
Product: general glycosylation pathway protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLD QASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMVKFSGEFFSVF KKSLLENQRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHRVYLGYLELAKILENELRMSKDK DYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSIKINAPALILLILSIIPNNMIEKLSKIRVALCKN
Sequences:
>Translated_309_residues MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLD QASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMVKFSGEFFSVF KKSLLENQRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHRVYLGYLELAKILENELRMSKDK DYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSIKINAPALILLILSIIPNNMIEKLSKIRVALCKN >Mature_308_residues PKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRIKYFLNQNYKQGPNGNKNNGLDQ ASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGNCLIEKEGNLSKEFSGKGLEKDSEISKKDFLMVKFSGEFFSVFK KSLLENQRFNEEFYGNEATLWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHRVYLGYLELAKILENELRMSKDKD YKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSIKINAPALILLILSIIPNNMIEKLSKIRVALCKN
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788372, Length=117, Percent_Identity=35.042735042735, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 35513; Mature: 35382
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRIK CCCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHH YFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGNCL HHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCEE IEKEGNLSKEFSGKGLEKDSEISKKDFLMVKFSGEFFSVFKKSLLENQRFNEEFYGNEAT EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHCCCCEE LWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHRVYLGYLELAKILENELRMSKDK EEEEEEECCHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCC DYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSIKINAPALILLILSIIPNNMIEKLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHCCHHHHHHHH KIRVALCKN HHHHHHCCC >Mature Secondary Structure PKLSVIVPTFNRQVLLEKAIKSIQNQDFKDLEIIVSDDNSSDDTKSVVQNLQKDDDRIK CCCEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHH YFLNQNYKQGPNGNKNNGLDQASGEFVTFLDDDDELLSGALSTLMQKANEGYAHVFGNCL HHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCEE IEKEGNLSKEFSGKGLEKDSEISKKDFLMVKFSGEFFSVFKKSLLENQRFNEEFYGNEAT EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHCCCCEE LWVNLYKEKSFYIHKAFRIYRIFRQDSVTLGASKNAHRVYLGYLELAKILENELRMSKDK EEEEEEECCHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCC DYKKTCASYYKMAAYYAKLAKNYKALYKCLFKSLSIKINAPALILLILSIIPNNMIEKLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHCCHHHHHHHH KIRVALCKN HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]