| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237968
Identifier: 57237968
GI number: 57237968
Start: 1144914
End: 1145309
Strand: Reverse
Name: 57237968
Synonym: CJE1229
Alternate gene names: NA
Gene position: 1145309-1144914 (Counterclockwise)
Preceding gene: 57237969
Following gene: 57237967
Centisome position: 64.42
GC content: 33.84
Gene sequence:
>396_bases ATGGCAATCTTTAATAAAGGCGGTATCAGCCCAACATCCAGCTCTAGCTCAGAAACAACAGTAATTTCTTCAGGTGCGAG AATTGAGGGTAAATTTTATTTTGCTTCTATGCTCCATGTTGATGGAGAGTTAAGTGGCATTATTCATTCTGAAAGTATTG TGGTTATCGGAAAAAATGGAAATTTAAAAGGTGAATTACAAGCAGATAAAATTGTAGTAAATGGGTGTTTTGAAGGGCAA CTTGAGGCTAATAGTTTAGAAATTTTAGCGGGCGGAGTTGTTAATGGTGATATTTCAACGCAAAAAATTTCTATAGAAAA TGGCGGTCGCTTTAATGGAACTAGTAAAATTAAAGAAGATACTATCAAACTTATTGAAAATAACAACGAAGAATAA
Upstream 100 bases:
>100_bases ATGAGGTAAGGTTTATTAATAAAACTTTAGAACCTTTGTATTTTTTAAATTTGCAAAGAAAAAATATGAATGATTTTTTT AATCAAGAAAGGAGAGTTCC
Downstream 100 bases:
>100_bases TGCAAGCTTCATTTTATGAATACTTACAAAATCCAAAAATTTGTGAACTTTTTCTTTGTAAAGATGAAAAACAAGCAGAT TTACTCGCTCAAGTTTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGELSGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQ LEANSLEILAGGVVNGDISTQKISIENGGRFNGTSKIKEDTIKLIENNNEE
Sequences:
>Translated_131_residues MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGELSGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQ LEANSLEILAGGVVNGDISTQKISIENGGRFNGTSKIKEDTIKLIENNNEE >Mature_130_residues AIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGELSGIIHSESIVVIGKNGNLKGELQADKIVVNGCFEGQL EANSLEILAGGVVNGDISTQKISIENGGRFNGTSKIKEDTIKLIENNNEE
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13804; Mature: 13672
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGELSGIIHSESIVVIGKNG CEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECCCEEEEEECCEEEEEECCC NLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQKISIENGGRFNGTSKIKED CEEEEEEEEEEEEEECCCCEECCCCEEEEECCEEECCCCEEEEEECCCCEECCCCCCCHH TIKLIENNNEE HEEEECCCCCC >Mature Secondary Structure AIFNKGGISPTSSSSSETTVISSGARIEGKFYFASMLHVDGELSGIIHSESIVVIGKNG EEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEECCCEEEEEECCEEEEEECCC NLKGELQADKIVVNGCFEGQLEANSLEILAGGVVNGDISTQKISIENGGRFNGTSKIKED CEEEEEEEEEEEEEECCCCEECCCCEEEEECCEEECCCCEEEEEECCCCEECCCCCCCHH TIKLIENNNEE HEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA