| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is yaaA [C]
Identifier: 57237811
GI number: 57237811
Start: 995932
End: 996672
Strand: Direct
Name: yaaA [C]
Synonym: CJE1066
Alternate gene names: 57237811
Gene position: 995932-996672 (Clockwise)
Preceding gene: 57237810
Following gene: 57237814
Centisome position: 56.02
GC content: 27.26
Gene sequence:
>741_bases ATGAAAATTTTATTCTCCCCTAGTGAAAGCAAAAATGAAAATTGTACAAAAAATCCCATCGATGAAAACTCATTTATATT TAAAGAATTATTTCCTTATAGAATGGAAGCTTTAAAGCATTATGGAGAATTTATCAAAAATGCAAGTTTAAAAAATTTAC AAGAACTTTTTGGCATTAAAAACGAAAATGAAATTGATAAATTTAAACACGACTTAAAACAAGCTCCCACTCAAGAAGCT ATAATGCTTTACACTGGGGTAAGTTATGAATATCTTAATTTTAAAGCTTTAGATAAAAAAAGTCAAGCTTATATTTTAGA AAATACTCTTATATTTTCTAATCTTTTTGGCGTTGTAAGAGCTAATGATACCCTACCCTTTTATAAATTCAAGCAAGGGG CTAAAATAGGAAATTTTACCATAGAGAAATTTTATAAAGAACATTTTAGTAAAGCCTTAGATGAATACTTGGAAAATGAA GAAATACTTGATCTTAGAGCAGGATTTTATGATAAATTCTATACCCCAAAAAAGAAATTTTATACCTATAAATTTGTAAA AAATGGTAAAGTCATCAGTCATTTTGCTAAAGCTTACAGGGGAATTTTACTCTCCATAAGTGCAAAAAACCAAGTAAAAA ACAATAAAGAGCTTTTAGCAAACCTTCCTTCAAATCTAAAACTCAAAGAAATTCAAATCAAAGGTTTAAAGGAAGAAATT GCGCTTGAAATTCTAGATTAG
Upstream 100 bases:
>100_bases TCATTTTAAATTTTAAAATGATAAAAACTTCAAAAACATTAAAAGCAAGATTAAATTCTTTGCTCTTAATGTTTTCATAA CATTAACAAAAAAGGCTAAA
Downstream 100 bases:
>100_bases TTTTTATTTTAAGTATTTTAAAGCTAGCTTCGCATAATAACTTGCAGCCCTAGCTAAAAGTTTATCATTAAAAACATAAC TAGAATTATGTAAATAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEA IMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENE EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI ALEILD
Sequences:
>Translated_246_residues MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEA IMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENE EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI ALEILD >Mature_246_residues MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIKNENEIDKFKHDLKQAPTQEA IMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVRANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENE EILDLRAGFYDKFYTPKKKFYTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI ALEILD
Specific function: Unknown
COG id: COG3022
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005583 [H]
Pfam domain/function: PF03883 DUF328 [H]
EC number: NA
Molecular weight: Translated: 28758; Mature: 28758
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIK CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC NENEIDKFKHDLKQAPTQEAIMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVR CCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECEEEECCCCCEEEHHHHHHHHHHHHHEE ANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENEEILDLRAGFYDKFYTPKKKF CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHE YTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI EEEEEEECCHHHHHHHHHHHCEEEEEECHHHHCCCHHHHHCCCCCCEEEEHHHCCCHHHH ALEILD HHEECC >Mature Secondary Structure MKILFSPSESKNENCTKNPIDENSFIFKELFPYRMEALKHYGEFIKNASLKNLQELFGIK CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC NENEIDKFKHDLKQAPTQEAIMLYTGVSYEYLNFKALDKKSQAYILENTLIFSNLFGVVR CCCHHHHHHHHHHHCCCCCEEEEEECCCEEEECEEEECCCCCEEEHHHHHHHHHHHHHEE ANDTLPFYKFKQGAKIGNFTIEKFYKEHFSKALDEYLENEEILDLRAGFYDKFYTPKKKF CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCHHE YTYKFVKNGKVISHFAKAYRGILLSISAKNQVKNNKELLANLPSNLKLKEIQIKGLKEEI EEEEEEECCHHHHHHHHHHHCEEEEEECHHHHCCCHHHHHCCCCCCEEEEHHHCCCHHHH ALEILD HHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]