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The map label for this gene is ybgC [C]

Identifier: 57237793

GI number: 57237793

Start: 982090

End: 982464

Strand: Reverse

Name: ybgC [C]

Synonym: CJE1045

Alternate gene names: 57237793

Gene position: 982464-982090 (Counterclockwise)

Preceding gene: 57237794

Following gene: 57237789

Centisome position: 55.26

GC content: 26.4

Gene sequence:

>375_bases
ATGAAAATGCGTGTGTATTATGAAGATACTGATGCGGGTGGAGTGGTGTATCATAGTAATTATTTAAAATTTTGCGAGAG
AGTAAGAAGTGAAATTTTTTTCAATAAAAAAGTAGATATTTTTGATGCGTCTAAGGGACATTTTTTACTTACAAAAGCAA
ATTGCAATTTCTTAAAACCTGCAAAACTTGGAGATATGATAGAGATTAAAACAAAAATTTTAGAAGTCAAAAATGCTTCT
GTGGAAATTTTACAAGAAATTTATAAAGATGAAATTTTGTTTTTTAAAATGGAATTAACTTTAGCTTTTATTAAAAACGA
AAAACCAGCTAGAATGGATATGCAGTTAAAAAAGCTCTTTGAAGAATTATTTTAA

Upstream 100 bases:

>100_bases
TTGGACGGAATTTTTAATATAAACTAAAAAGCGATATCAAAGAATTTCCGTTGTATAATCTAATGTTTTTTAAATGTGAA
ATATTTTTTAAGGTAAAGCG

Downstream 100 bases:

>100_bases
TTCTTCAAAGCTTGCTTGCTTACCTTGCATAAGACGCACTTTGTAATCAACTTGAGAATTTTTGATTTTCTCATCAAATA
AACTTTCGCTTTTTTTATTT

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKMRVYYEDTDAGGVVYHSNYLKFCERVRSEIFFNKKVDIFDASKGHFLLTKANCNFLKPAKLGDMIEIKTKILEVKNAS
VEILQEIYKDEILFFKMELTLAFIKNEKPARMDMQLKKLFEELF

Sequences:

>Translated_124_residues
MKMRVYYEDTDAGGVVYHSNYLKFCERVRSEIFFNKKVDIFDASKGHFLLTKANCNFLKPAKLGDMIEIKTKILEVKNAS
VEILQEIYKDEILFFKMELTLAFIKNEKPARMDMQLKKLFEELF
>Mature_124_residues
MKMRVYYEDTDAGGVVYHSNYLKFCERVRSEIFFNKKVDIFDASKGHFLLTKANCNFLKPAKLGDMIEIKTKILEVKNAS
VEILQEIYKDEILFFKMELTLAFIKNEKPARMDMQLKKLFEELF

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=93, Percent_Identity=40.8602150537634, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14677; Mature: 14677

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRVYYEDTDAGGVVYHSNYLKFCERVRSEIFFNKKVDIFDASKGHFLLTKANCNFLKP
CCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEECC
AKLGDMIEIKTKILEVKNASVEILQEIYKDEILFFKMELTLAFIKNEKPARMDMQLKKLF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEHEEEEEEECCCCCCCCCHHHHHHH
EELF
HHHC
>Mature Secondary Structure
MKMRVYYEDTDAGGVVYHSNYLKFCERVRSEIFFNKKVDIFDASKGHFLLTKANCNFLKP
CCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEECC
AKLGDMIEIKTKILEVKNASVEILQEIYKDEILFFKMELTLAFIKNEKPARMDMQLKKLF
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEHEEEEEEECCCCCCCCCHHHHHHH
EELF
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]