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The map label for this gene is yidD [C]

Identifier: 57237787

GI number: 57237787

Start: 978901

End: 979242

Strand: Reverse

Name: yidD [C]

Synonym: CJE1039

Alternate gene names: 57237787

Gene position: 979242-978901 (Counterclockwise)

Preceding gene: 57237788

Following gene: 57237786

Centisome position: 55.08

GC content: 26.02

Gene sequence:

>342_bases
ATGATATGCCTAAAAATACTCCGTTTTTATCAGAAATTCTTAAGTCCTTTAAAACCCGCTGCTTGTAGGTATTATCCTAG
TTGTTCTGAGTATGCGCTTTGGCAGTTTCAAAAAAAGAATTTTTTTCTAGCTTTTTTTTCTACTTTTTTTAGAGTTTTAA
GATGCAACCCTTTTTTTAAAGGGGGGTTTGATTATCCTAGAGTTTCTAAAAATTTTTATCCTATAAATTTATGTTTTAAG
CCTATATTTTTAGCAAAAAAACAACTTTGTTTTTTATATATACCTTATAAAAATAAAAGTTTTTATCTTATAAAAATCAT
CTTTAAAAGGACAAATCAGTGA

Upstream 100 bases:

>100_bases
GCAAATATATTTTTGTAGCTAAAAATGAAATCACTGAACTTTCTTTTTCTAGGTTAGAAAAAAATCTAAAATGGGGATTG
AAAAAACTAGAATGTTTCAA

Downstream 100 bases:

>100_bases
ATAATTCAAATAATATTTTTCAGCAAAAGCGTATACTTTTAGCTGTTGTGATTTCTTTTTTATTTTTTGTTGTTTACGAT
TATTTTTTCATTCCAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFFSTFFRVLRCNPFFKGGFDYPRVSKNFYPINLCFK
PIFLAKKQLCFLYIPYKNKSFYLIKIIFKRTNQ

Sequences:

>Translated_113_residues
MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFFSTFFRVLRCNPFFKGGFDYPRVSKNFYPINLCFK
PIFLAKKQLCFLYIPYKNKSFYLIKIIFKRTNQ
>Mature_113_residues
MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFFSTFFRVLRCNPFFKGGFDYPRVSKNFYPINLCFK
PIFLAKKQLCFLYIPYKNKSFYLIKIIFKRTNQ

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1039_CAMJR (Q5HUK0)

Other databases:

- EMBL:   CP000025
- RefSeq:   YP_179035.1
- STRING:   Q5HUK0
- GeneID:   3231549
- GenomeReviews:   CP000025_GR
- KEGG:   cjr:CJE1039
- NMPDR:   fig|195099.3.peg.1092
- TIGR:   CJE1039
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   VPISIKN
- ProtClustDB:   CLSK2516852
- BioCyc:   CJEJ195099:CJE_1039-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 13806; Mature: 13806

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFFSTFFRVLRCNPFFK
CHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCC
GGFDYPRVSKNFYPINLCFKPIFLAKKQLCFLYIPYKNKSFYLIKIIFKRTNQ
CCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEECCCC
>Mature Secondary Structure
MICLKILRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFFSTFFRVLRCNPFFK
CHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHCCCCCC
GGFDYPRVSKNFYPINLCFKPIFLAKKQLCFLYIPYKNKSFYLIKIIFKRTNQ
CCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA