Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226894
Identifier: 21226894
GI number: 21226894
Start: 945748
End: 947277
Strand: Reverse
Name: 21226894
Synonym: MM_0792
Alternate gene names: NA
Gene position: 947277-945748 (Counterclockwise)
Preceding gene: 21226895
Following gene: 21226892
Centisome position: 23.12
GC content: 44.31
Gene sequence:
>1530_bases ATGGAACAGTTCTCTTTTATTGCCTCAATGCCTGATGAGCCAGGAGCACTTCACAGGGCAGCCGAAATTATCACACGGTA TAAAGGAAACATCAACCGGATCCAGTATGACCGGAGAATTGACAGGAACATTGTCTTCTTTGAGGTAGCTGCTGCTTCAG AGGTTTATGAAAAAATTCGTGAGGAGCTGGAAAGAATAGGTTACCTCCAGACCTCTCTGCATCCCGTAGCTTTCCTTAAA TTCAATGTTTATCTCCCTAACTGCCCCGGAGCTTTATTTGATTTCCTGAACCATACCACTTCTTCAGGGGCAAATATTAC TTTCCTTGATTTCGATGATAGGGGACATCATCCCGAAAGGCTTGTCGTGAGCCTGAATATTGAAAATACTGACCTTATAG ATTCTCTCCTTAACAGGCTCAAGTCAAAGTACAGGCTTGAGATTGTAGAGTATGATACAACAGGCGAAAAGCTCGATGAT ACGGTTTTTTACCTCAGGCTTGCCCAGAAATTGAGGTACTATCTTGGAAATGCTGAAGACGATTTTTTAATGAAATTTCT CCATGATATCAACCACATCGCTCAGGAGCTCTCAAACCTGAAAAAAGATCCTGTAGAGGTCTTTGAGAATATCCTTAAAG TCGGGGAAACCCTCCGCAGGACCTCAGGTGAAGGGTTTTATGCCGATGTGCAGAGGGTCAGGATAAATAAAGAGATTGAA CTTTTCTGCTTTCAGCTTCCCTGTGGGGGAAATATCTATCTTTTCGATACCCCTGGAGAAAAGGTCATGATTGATGCCGG TTATGGAATATACCAGCCTGATGTCGTGAACATGCTCCAGCACTATGGGCTTGGGGACCTGAGCCTGCTTAAAAGGATCT ATATTACTCATGCAGATGCTGACCACTGCGGAGCTGCCGGCTTTTTCTCTGCCCCTTCCTATCTGAACCGGGAAACCCTG AAAATTACACAGGAAACCAGCAGGGCTTATGGGTCCAGCAACCAGGGATGTATCCTGGAAGAAGTTTATACGAAAATGAT TAACCTCTTCTCAAGGTTCACCCCTCCTTCAAATGTAATCCTTTTTCCGGAAATTTCATACCAGGATAAGGAAATAGAGA AAAGGGGAGCTTTTCCGGTTGTTTCCCGTTTCACGATAGGAGATCTTGAGTTTGAAGCTCTTCAGGGCCTTGGAGGACAT ATGTATGGGGAAATATTCTATCTCTGCCCTGAAGAAGGCCTGCTTTTCCCTCAGGACGCGGTGATTAATTTCAGGAGTTT GAGCCCGGAGAGGACGGAATATAATGTTCTGGCTGACTATCTTATGACTTCGGTAAATGTGGACAGCAGCCTTGCAAAAG AGGAAAGGAATGCTCTACTTTCTCTTATACAGGAACTGGATTCCGAACTTGTTAAAAAAGGCAGGAAGTGTCTTGTTTGC TGCGGTCACGGTTCCATATCCGTGCTTGAAAACGGGAAACTTGTTGAACATTCTAGCTCAGAGAGGTACTTTGCAAGAAA AGCTCTGTAA
Upstream 100 bases:
>100_bases TTCCTTTTTTCTTTCTCACAGGTACAGGAAAGTTTAAAGTAAGGCAGGATTTTATTTTAATTATCAGAAAAAACGTTCCA ATCTGATCAGGGGATGTTTC
Downstream 100 bases:
>100_bases ATTTTAATGGATATTAATAAATAATAATGGATAATAATGAACAATTATTCTTCTGATATCCCTAAAACCTACTATCAGTT TTACTGACAAATGACTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Vesicle-Fusing ATPase; Beta-Lactamase-Like; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MEQFSFIASMPDEPGALHRAAEIITRYKGNINRIQYDRRIDRNIVFFEVAAASEVYEKIREELERIGYLQTSLHPVAFLK FNVYLPNCPGALFDFLNHTTSSGANITFLDFDDRGHHPERLVVSLNIENTDLIDSLLNRLKSKYRLEIVEYDTTGEKLDD TVFYLRLAQKLRYYLGNAEDDFLMKFLHDINHIAQELSNLKKDPVEVFENILKVGETLRRTSGEGFYADVQRVRINKEIE LFCFQLPCGGNIYLFDTPGEKVMIDAGYGIYQPDVVNMLQHYGLGDLSLLKRIYITHADADHCGAAGFFSAPSYLNRETL KITQETSRAYGSSNQGCILEEVYTKMINLFSRFTPPSNVILFPEISYQDKEIEKRGAFPVVSRFTIGDLEFEALQGLGGH MYGEIFYLCPEEGLLFPQDAVINFRSLSPERTEYNVLADYLMTSVNVDSSLAKEERNALLSLIQELDSELVKKGRKCLVC CGHGSISVLENGKLVEHSSSERYFARKAL
Sequences:
>Translated_509_residues MEQFSFIASMPDEPGALHRAAEIITRYKGNINRIQYDRRIDRNIVFFEVAAASEVYEKIREELERIGYLQTSLHPVAFLK FNVYLPNCPGALFDFLNHTTSSGANITFLDFDDRGHHPERLVVSLNIENTDLIDSLLNRLKSKYRLEIVEYDTTGEKLDD TVFYLRLAQKLRYYLGNAEDDFLMKFLHDINHIAQELSNLKKDPVEVFENILKVGETLRRTSGEGFYADVQRVRINKEIE LFCFQLPCGGNIYLFDTPGEKVMIDAGYGIYQPDVVNMLQHYGLGDLSLLKRIYITHADADHCGAAGFFSAPSYLNRETL KITQETSRAYGSSNQGCILEEVYTKMINLFSRFTPPSNVILFPEISYQDKEIEKRGAFPVVSRFTIGDLEFEALQGLGGH MYGEIFYLCPEEGLLFPQDAVINFRSLSPERTEYNVLADYLMTSVNVDSSLAKEERNALLSLIQELDSELVKKGRKCLVC CGHGSISVLENGKLVEHSSSERYFARKAL >Mature_509_residues MEQFSFIASMPDEPGALHRAAEIITRYKGNINRIQYDRRIDRNIVFFEVAAASEVYEKIREELERIGYLQTSLHPVAFLK FNVYLPNCPGALFDFLNHTTSSGANITFLDFDDRGHHPERLVVSLNIENTDLIDSLLNRLKSKYRLEIVEYDTTGEKLDD TVFYLRLAQKLRYYLGNAEDDFLMKFLHDINHIAQELSNLKKDPVEVFENILKVGETLRRTSGEGFYADVQRVRINKEIE LFCFQLPCGGNIYLFDTPGEKVMIDAGYGIYQPDVVNMLQHYGLGDLSLLKRIYITHADADHCGAAGFFSAPSYLNRETL KITQETSRAYGSSNQGCILEEVYTKMINLFSRFTPPSNVILFPEISYQDKEIEKRGAFPVVSRFTIGDLEFEALQGLGGH MYGEIFYLCPEEGLLFPQDAVINFRSLSPERTEYNVLADYLMTSVNVDSSLAKEERNALLSLIQELDSELVKKGRKCLVC CGHGSISVLENGKLVEHSSSERYFARKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58031; Mature: 58031
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQFSFIASMPDEPGALHRAAEIITRYKGNINRIQYDRRIDRNIVFFEVAAASEVYEKIR CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHCCCEEEEEEEHHHHHHHHHHH EELERIGYLQTSLHPVAFLKFNVYLPNCPGALFDFLNHTTSSGANITFLDFDDRGHHPER HHHHHCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE LVVSLNIENTDLIDSLLNRLKSKYRLEIVEYDTTGEKLDDTVFYLRLAQKLRYYLGNAED EEEEEECCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCH DFLMKFLHDINHIAQELSNLKKDPVEVFENILKVGETLRRTSGEGFYADVQRVRINKEIE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCEEE LFCFQLPCGGNIYLFDTPGEKVMIDAGYGIYQPDVVNMLQHYGLGDLSLLKRIYITHADA EEEEECCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEECCC DHCGAAGFFSAPSYLNRETLKITQETSRAYGSSNQGCILEEVYTKMINLFSRFTPPSNVI CCCCCCCCCCCCCCCCCHHEEEEHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEE LFPEISYQDKEIEKRGAFPVVSRFTIGDLEFEALQGLGGHMYGEIFYLCPEEGLLFPQDA EECCCCCCCHHHHHCCCCCCHHEEEECCCHHHHHHCCCCCEEEEEEEEECCCCCCCCHHH VINFRSLSPERTEYNVLADYLMTSVNVDSSLAKEERNALLSLIQELDSELVKKGRKCLVC HEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE CGHGSISVLENGKLVEHSSSERYFARKAL ECCCCEEEEECCEEEECCCCCHHHHHHCC >Mature Secondary Structure MEQFSFIASMPDEPGALHRAAEIITRYKGNINRIQYDRRIDRNIVFFEVAAASEVYEKIR CCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHCCCEEEEEEEHHHHHHHHHHH EELERIGYLQTSLHPVAFLKFNVYLPNCPGALFDFLNHTTSSGANITFLDFDDRGHHPER HHHHHCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE LVVSLNIENTDLIDSLLNRLKSKYRLEIVEYDTTGEKLDDTVFYLRLAQKLRYYLGNAED EEEEEECCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCH DFLMKFLHDINHIAQELSNLKKDPVEVFENILKVGETLRRTSGEGFYADVQRVRINKEIE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCEEE LFCFQLPCGGNIYLFDTPGEKVMIDAGYGIYQPDVVNMLQHYGLGDLSLLKRIYITHADA EEEEECCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEECCC DHCGAAGFFSAPSYLNRETLKITQETSRAYGSSNQGCILEEVYTKMINLFSRFTPPSNVI CCCCCCCCCCCCCCCCCHHEEEEHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCCEE LFPEISYQDKEIEKRGAFPVVSRFTIGDLEFEALQGLGGHMYGEIFYLCPEEGLLFPQDA EECCCCCCCHHHHHCCCCCCHHEEEECCCHHHHHHCCCCCEEEEEEEEECCCCCCCCHHH VINFRSLSPERTEYNVLADYLMTSVNVDSSLAKEERNALLSLIQELDSELVKKGRKCLVC HEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE CGHGSISVLENGKLVEHSSSERYFARKAL ECCCCEEEEECCEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA