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The map label for this gene is ydgM [C]

Identifier: 21226862

GI number: 21226862

Start: 908748

End: 908924

Strand: Reverse

Name: ydgM [C]

Synonym: MM_0760

Alternate gene names: 21226862

Gene position: 908924-908748 (Counterclockwise)

Preceding gene: 21226864

Following gene: 21226854

Centisome position: 22.19

GC content: 50.85

Gene sequence:

>177_bases
ATGGTAGCAAAAATCGATGCCGATGCCTGTACAGGCTGTGGAACCTGTGTAGATGAATGCCCAGCAGCTGCAATCTCCCT
CAATGACGATGACATTGCAGTTGTAGACGAAGATGAATGCCTTGACTGCGGTGCATGTGTAGATGCCTGCCCGAACGGGG
CAATCACTCTCGAGTAA

Upstream 100 bases:

>100_bases
GAAGCGACAGCTTTTTATAAATTATTATCTCCTTGTATGTCAACCTTCTATATTTTCGACTCTATAAAAATCCCCCTTGT
TTAAATAAGGAGTGAAAAAC

Downstream 100 bases:

>100_bases
CGTTTTTAAAAATAAGTTCTGAAAAGCGGGGTTTCCAAACTCCGCCATTCAGGCCAGGGTTTTTGAGCTTTTCTTATTTC
AGGTCTTTTCCTGAACCCGG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MVAKIDADACTGCGTCVDECPAAAISLNDDDIAVVDEDECLDCGACVDACPNGAITLE

Sequences:

>Translated_58_residues
MVAKIDADACTGCGTCVDECPAAAISLNDDDIAVVDEDECLDCGACVDACPNGAITLE
>Mature_58_residues
MVAKIDADACTGCGTCVDECPAAAISLNDDDIAVVDEDECLDCGACVDACPNGAITLE

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 5809; Mature: 5809

Theoretical pI: Translated: 3.11; Mature: 3.11

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

13.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
15.5 %Cys+Met (Translated Protein)
13.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
15.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAKIDADACTGCGTCVDECPAAAISLNDDDIAVVDEDECLDCGACVDACPNGAITLE
CCEECCCCCCCCCCCCCHHCCCEEEEECCCCEEEECCCCCCCCCCHHHCCCCCEEEEC
>Mature Secondary Structure
MVAKIDADACTGCGTCVDECPAAAISLNDDDIAVVDEDECLDCGACVDACPNGAITLE
CCEECCCCCCCCCCCCCHHCCCEEEEECCCCEEEECCCCCCCCCCHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1379583 [H]