Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226854
Identifier: 21226854
GI number: 21226854
Start: 902478
End: 902993
Strand: Reverse
Name: 21226854
Synonym: MM_0752
Alternate gene names: NA
Gene position: 902993-902478 (Counterclockwise)
Preceding gene: 21226862
Following gene: 21226851
Centisome position: 22.04
GC content: 45.74
Gene sequence:
>516_bases GTGAGGTGGGATTACTTGATAGGAATTATTTCGGATTCGCATGATAACCTGGCAGCTATCCGGAAAGCTGTGGAATTCTT CAACAAAAAACAGGTAAAAGCAGTGCTGCATGCAGGGGATATCATTTCCCCTTTCACGGTAAGGGAATTTAAAGAACTAA ATCCAAAACTCTATTTCGTCTTTGGGAATAACGATGGGGATAGAGTAACCCTGACAAAGAAGTTTGAAGAAATAGGTGCC GTTTCCTGTGGGGATTTCGGGGATCTTACTATTGACGGGCTGCATATCGCCCTTTTACATGGGACAGACGAAACTCTTGT CAGAGCTCTTGCAAAGTCAGGAGATTTTGACGTTGTGGTCCGGGGGCATACTCACAACGCAGGGGTCAAAATGATTGACG GGACACCTGTACTAAATCCAGGCGAGTGTTCCGGGGTTCTGTCAGGAAAAGTTACGGTTGCAACCCTTGAGATCGCAAAC CTTAACGTTGAGATTACGGAACTTGAGCTGGACTGA
Upstream 100 bases:
>100_bases CCTCAGAGATTATTGGAGTAATATCTATATCTCCTATTTAAAAATAGCTCTTTCCTGAGCCTCAAAGTATGTATTAAATA TTCAGGGCGTCTAGTATTAA
Downstream 100 bases:
>100_bases CCTTTATCTTCACTTTTTTCTTTTTTAAGCTTGACTTATCGTTCTCTTTTTCTTATTATCTTCTTTCTGCGGTTTTTTCC TTTAACGTACCTTTTCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRWDYLIGIISDSHDNLAAIRKAVEFFNKKQVKAVLHAGDIISPFTVREFKELNPKLYFVFGNNDGDRVTLTKKFEEIGA VSCGDFGDLTIDGLHIALLHGTDETLVRALAKSGDFDVVVRGHTHNAGVKMIDGTPVLNPGECSGVLSGKVTVATLEIAN LNVEITELELD
Sequences:
>Translated_171_residues MRWDYLIGIISDSHDNLAAIRKAVEFFNKKQVKAVLHAGDIISPFTVREFKELNPKLYFVFGNNDGDRVTLTKKFEEIGA VSCGDFGDLTIDGLHIALLHGTDETLVRALAKSGDFDVVVRGHTHNAGVKMIDGTPVLNPGECSGVLSGKVTVATLEIAN LNVEITELELD >Mature_171_residues MRWDYLIGIISDSHDNLAAIRKAVEFFNKKQVKAVLHAGDIISPFTVREFKELNPKLYFVFGNNDGDRVTLTKKFEEIGA VSCGDFGDLTIDGLHIALLHGTDETLVRALAKSGDFDVVVRGHTHNAGVKMIDGTPVLNPGECSGVLSGKVTVATLEIAN LNVEITELELD
Specific function: Shows phosphodiesterase activity, hydrolyzing phosphodiesters bonds in the artificial chromogenic substrates bis-p-nitrophenyl phosphate (bis-pNPP), and less efficiently thymidine 5'-monophosphate p-nitrophenyl ester (pNP-TMP) and p- nitrophenylphosphoryl
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 18636; Mature: 18636
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS01269 UPF0025
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWDYLIGIISDSHDNLAAIRKAVEFFNKKQVKAVLHAGDIISPFTVREFKELNPKLYFV CCCEEEEEEEECCCCCHHHHHHHHHHHCHHHHHHEECCCCCCCCCHHHHHHHCCCEEEEE FGNNDGDRVTLTKKFEEIGAVSCGDFGDLTIDGLHIALLHGTDETLVRALAKSGDFDVVV EECCCCCEEEEEEEHHHHCCCCCCCCCCEEECCEEEEEEECCHHHHHHHHHCCCCEEEEE RGHTHNAGVKMIDGTPVLNPGECSGVLSGKVTVATLEIANLNVEITELELD ECCCCCCCEEEECCCCCCCCCCCCEEECCCEEEEEEEEEECEEEEEEEEEC >Mature Secondary Structure MRWDYLIGIISDSHDNLAAIRKAVEFFNKKQVKAVLHAGDIISPFTVREFKELNPKLYFV CCCEEEEEEEECCCCCHHHHHHHHHHHCHHHHHHEECCCCCCCCCHHHHHHHCCCEEEEE FGNNDGDRVTLTKKFEEIGAVSCGDFGDLTIDGLHIALLHGTDETLVRALAKSGDFDVVV EECCCCCEEEEEEEHHHHCCCCCCCCCCEEECCEEEEEEECCHHHHHHHHHCCCCEEEEE RGHTHNAGVKMIDGTPVLNPGECSGVLSGKVTVATLEIANLNVEITELELD ECCCCCCCEEEECCCCCCCCCCCCEEECCCEEEEEEEEEECEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]