Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is ubiE [C]
Identifier: 21226832
GI number: 21226832
Start: 880280
End: 881011
Strand: Reverse
Name: ubiE [C]
Synonym: MM_0730
Alternate gene names: 21226832
Gene position: 881011-880280 (Counterclockwise)
Preceding gene: 21226837
Following gene: 21226831
Centisome position: 21.51
GC content: 46.45
Gene sequence:
>732_bases GTGGTGCATACTCCTCTGAATTTCAAATTCTCTGAAAAAAGAGAAGAATGGAACCTGCGGTTTTGCAGGAATGTCGGAGT CTCCATTGTGGAACTGGTTACAGCCGATGCCAGCAGTGCTTACGTGAGGGGTTTGATGGCTGTTAACGGGTCAAAAGTCT ATTCTATCCTTCCTTTCATCTCAATAGATGCAGAAAAAGCAAAAAAAGCTAAATTCCCTGAAGACCGCATGTCCGGTGTA AGGGGCAAGGTGATCCCATCCGTGCTTCCGGAAATAAAAGGGGAAACTATCCTTGATATTGGCTGCGGTTTCGGGACACT CACAATGGAGCTTGCAAAAAATAACCCTGAATCGCAGGTTTACGGCATTGACCTTCATGATTCCCTCACAGGCCAGGCAG AAATGAATGCTGAAGTCCTCGGATTGCCAAATGTTGAGTTCAGGACAGGAAGCGCCTATGCCCTGCCTTTTGAAAAGGAC TCGATAGACGCTGTAACCTGCTTTTTAATGCTCCATCACCTGGAGGATATTAAGTTCGCACTTTTTGAGATCAAAAGAGT GTTGAAAAAAGGCGGGTCATTAACTGCAGTTGAGCCGCTGGCACACCAGCACCATCACGGGCCCCAGCTTTCGGAAGCCG AATGGAAAGAGCTTTTTGAGGAAGCAGGTTTTGGTACGGAAACCGAAAATATGGAAGGAGCAGTTGTTTTGAGAGCCGTG AAAAGAGAATAA
Upstream 100 bases:
>100_bases GCAAATCCTCTCCCTTTTCAGGGAAAGCATAAGCGAAATTCGCCTGAATGAACCTGAATCAGTATCAGCATACTTCAGCC CCAGCTATTCGTATTATATC
Downstream 100 bases:
>100_bases TATTAATATTGAGATGAGTGATTTTAAAAATGGATTGAAAGATTTTCAGAACATGATTATGAATTTTATTTTCTTTCAAT CCATCTTATCAGCTGTTCAT
Product: SAM-dependent methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MVHTPLNFKFSEKREEWNLRFCRNVGVSIVELVTADASSAYVRGLMAVNGSKVYSILPFISIDAEKAKKAKFPEDRMSGV RGKVIPSVLPEIKGETILDIGCGFGTLTMELAKNNPESQVYGIDLHDSLTGQAEMNAEVLGLPNVEFRTGSAYALPFEKD SIDAVTCFLMLHHLEDIKFALFEIKRVLKKGGSLTAVEPLAHQHHHGPQLSEAEWKELFEEAGFGTETENMEGAVVLRAV KRE
Sequences:
>Translated_243_residues MVHTPLNFKFSEKREEWNLRFCRNVGVSIVELVTADASSAYVRGLMAVNGSKVYSILPFISIDAEKAKKAKFPEDRMSGV RGKVIPSVLPEIKGETILDIGCGFGTLTMELAKNNPESQVYGIDLHDSLTGQAEMNAEVLGLPNVEFRTGSAYALPFEKD SIDAVTCFLMLHHLEDIKFALFEIKRVLKKGGSLTAVEPLAHQHHHGPQLSEAEWKELFEEAGFGTETENMEGAVVLRAV KRE >Mature_243_residues MVHTPLNFKFSEKREEWNLRFCRNVGVSIVELVTADASSAYVRGLMAVNGSKVYSILPFISIDAEKAKKAKFPEDRMSGV RGKVIPSVLPEIKGETILDIGCGFGTLTMELAKNNPESQVYGIDLHDSLTGQAEMNAEVLGLPNVEFRTGSAYALPFEKD SIDAVTCFLMLHHLEDIKFALFEIKRVLKKGGSLTAVEPLAHQHHHGPQLSEAEWKELFEEAGFGTETENMEGAVVLRAV KRE
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 26906; Mature: 26906
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHTPLNFKFSEKREEWNLRFCRNVGVSIVELVTADASSAYVRGLMAVNGSKVYSILPFI CCCCCCCCCCCCCHHHHCHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCCCEEEEECEE SIDAEKAKKAKFPEDRMSGVRGKVIPSVLPEIKGETILDIGCGFGTLTMELAKNNPESQV ECCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEE YGIDLHDSLTGQAEMNAEVLGLPNVEFRTGSAYALPFEKDSIDAVTCFLMLHHLEDIKFA EEEECCCCCCCCCCCCEEEEECCCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH LFEIKRVLKKGGSLTAVEPLAHQHHHGPQLSEAEWKELFEEAGFGTETENMEGAVVLRAV HHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEE KRE CCC >Mature Secondary Structure MVHTPLNFKFSEKREEWNLRFCRNVGVSIVELVTADASSAYVRGLMAVNGSKVYSILPFI CCCCCCCCCCCCCHHHHCHHHHHHCCCCEEHHHHCCCHHHHHHHHHHCCCCCEEEEECEE SIDAEKAKKAKFPEDRMSGVRGKVIPSVLPEIKGETILDIGCGFGTLTMELAKNNPESQV ECCHHHHHHCCCCHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEE YGIDLHDSLTGQAEMNAEVLGLPNVEFRTGSAYALPFEKDSIDAVTCFLMLHHLEDIKFA EEEECCCCCCCCCCCCEEEEECCCCEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH LFEIKRVLKKGGSLTAVEPLAHQHHHGPQLSEAEWKELFEEAGFGTETENMEGAVVLRAV HHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEE KRE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155856 [H]