| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is pyk [H]
Identifier: 21226817
GI number: 21226817
Start: 861276
End: 862709
Strand: Direct
Name: pyk [H]
Synonym: MM_0715
Alternate gene names: 21226817
Gene position: 861276-862709 (Clockwise)
Preceding gene: 21226816
Following gene: 21226818
Centisome position: 21.03
GC content: 47.77
Gene sequence:
>1434_bases ATGGAAATCCCGGATCATAAAACAAAGATCGTCTGTACAATAGGACCTGCCTCTTCTTCTGAAGAGATGATAAGGAAGCT TATGCTTGCGGGCATGAACGTGGCAAGGATAAATTTTTCTCACGGAGACTTTGAGAGCCACTCAAGGGTTGTCCGAATTA TCCGTAAGGTTGCAGATGAACTTGGCAGGACAATTGCAATCCTTGCAGACCTGCCTGGCCCGAAAATACGCATAGGCAAA CTCGAAAAAGAGCCTGTTATGCTCCATAAAGGGAACCCGATAACCCTTACAATTGACGACACTCCGGGAAACGAAGAGAG AATCCCTGTCAGTTACAAACAGCTTCCGGAAAGCGTAACCCCTGGGAGCCTTATCTACCTCAGTGACGGGTTCATACAGC TCCTCTGCAAGGAGGTTACAGGAAAAGACGTTCTCTGTGAAGTCCTTATCGGAGGAGAGCTTTATTCGCACAAAGGGCTG AACCTTCCAGGGGCAAAGATCTTTCTTGACGCTGTGACTGAAAAAGATTTCAGGATCCTGGAATTTGCCCTTGAAGAGGA CATTGACACTTTCAGCATCTCTTTTGTAGAAAATGCAGAAGATATCCGAAAAGTAAGAAATTTTGCCGCTTCCAGAGGAA AGCAGGTAAATATAGTATCAAAAATAGAACGCAGGCAGGCTGTAGAAAATATAGGAGAAATCCTTGACGAGACCGATGCC CTTATGGTTGCAAGGGGAGACCTGGGAGTTGAAATTCCTATCCAGGAAGTCCCTTCGGTCCAGAAAGAACTTATCCAGAG GGCAAAGCTCCTTGGGGTTCCTGTGATTACTGCAACCCATATGCTGGCTTCCATGACAGATAATATAAGACCCACGCGTG CCGAAGCCACGGATGTTGCAAACGCTATCCTTGACGGCACGGATGCTGTTATGCTCTCGGAAGAAACAGCAGTCGGAAAC TACCCCGTGGAAGCTGTCGAGATGATGGCAAAGATTGCAAAGACCACTGAAAACTGGCGCTCCCGGACTAAATGGGGGCT TGACACAATGATCAAATCCATAACTGCCAGGGAGATGTCAGTGGATGAGGTAATCACCTTACAGGTTTATGAAGCCCTGC AGAAACTGCCTGTTGCAGCCGTACTTACCCCGACAAGGAGCGGAGCGACTCCCCGCAGGATTTCGCGCTTTAATCCTGAC CCCTGGATTCTGGCTTTCAGCCGCGTTCCTAAGACCTGCAGGTTCCTTTCCCTGTCTTACGGGGTTTATCCTGTTGCCGT AAACGAATCTATTGAAAGCTGGGAAAAAGAGACAACGGAAAGAACAAAAGAATTGGGATTTGCGAAAAGTAAAGATCTCG TGATTTTTACCCAGGGCCCTGCTTCCGGAAAACCCGGAGGTACGAATATGCTCAAGATCCTGACCCTTGACTGA
Upstream 100 bases:
>100_bases TACCAGAAGGGCCTGGGCAGGATTTTTCTGAAAGCGCATGAAATAAATTCCAAATTTTTCAAAAAGGGATAAATCCAGAA AAATTTGAGGCTGTATAACC
Downstream 100 bases:
>100_bases AAAGGGCAGAACATTCCAGAATTGAGATAAGGAGATAAAACCTCAATTATCTCAGAAAGACTTTTTTATCCCGAATTCTT TTTTTCAAAAGTTAGGGTAA
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MEIPDHKTKIVCTIGPASSSEEMIRKLMLAGMNVARINFSHGDFESHSRVVRIIRKVADELGRTIAILADLPGPKIRIGK LEKEPVMLHKGNPITLTIDDTPGNEERIPVSYKQLPESVTPGSLIYLSDGFIQLLCKEVTGKDVLCEVLIGGELYSHKGL NLPGAKIFLDAVTEKDFRILEFALEEDIDTFSISFVENAEDIRKVRNFAASRGKQVNIVSKIERRQAVENIGEILDETDA LMVARGDLGVEIPIQEVPSVQKELIQRAKLLGVPVITATHMLASMTDNIRPTRAEATDVANAILDGTDAVMLSEETAVGN YPVEAVEMMAKIAKTTENWRSRTKWGLDTMIKSITAREMSVDEVITLQVYEALQKLPVAAVLTPTRSGATPRRISRFNPD PWILAFSRVPKTCRFLSLSYGVYPVAVNESIESWEKETTERTKELGFAKSKDLVIFTQGPASGKPGGTNMLKILTLD
Sequences:
>Translated_477_residues MEIPDHKTKIVCTIGPASSSEEMIRKLMLAGMNVARINFSHGDFESHSRVVRIIRKVADELGRTIAILADLPGPKIRIGK LEKEPVMLHKGNPITLTIDDTPGNEERIPVSYKQLPESVTPGSLIYLSDGFIQLLCKEVTGKDVLCEVLIGGELYSHKGL NLPGAKIFLDAVTEKDFRILEFALEEDIDTFSISFVENAEDIRKVRNFAASRGKQVNIVSKIERRQAVENIGEILDETDA LMVARGDLGVEIPIQEVPSVQKELIQRAKLLGVPVITATHMLASMTDNIRPTRAEATDVANAILDGTDAVMLSEETAVGN YPVEAVEMMAKIAKTTENWRSRTKWGLDTMIKSITAREMSVDEVITLQVYEALQKLPVAAVLTPTRSGATPRRISRFNPD PWILAFSRVPKTCRFLSLSYGVYPVAVNESIESWEKETTERTKELGFAKSKDLVIFTQGPASGKPGGTNMLKILTLD >Mature_477_residues MEIPDHKTKIVCTIGPASSSEEMIRKLMLAGMNVARINFSHGDFESHSRVVRIIRKVADELGRTIAILADLPGPKIRIGK LEKEPVMLHKGNPITLTIDDTPGNEERIPVSYKQLPESVTPGSLIYLSDGFIQLLCKEVTGKDVLCEVLIGGELYSHKGL NLPGAKIFLDAVTEKDFRILEFALEEDIDTFSISFVENAEDIRKVRNFAASRGKQVNIVSKIERRQAVENIGEILDETDA LMVARGDLGVEIPIQEVPSVQKELIQRAKLLGVPVITATHMLASMTDNIRPTRAEATDVANAILDGTDAVMLSEETAVGN YPVEAVEMMAKIAKTTENWRSRTKWGLDTMIKSITAREMSVDEVITLQVYEALQKLPVAAVLTPTRSGATPRRISRFNPD PWILAFSRVPKTCRFLSLSYGVYPVAVNESIESWEKETTERTKELGFAKSKDLVIFTQGPASGKPGGTNMLKILTLD
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=492, Percent_Identity=38.6178861788618, Blast_Score=322, Evalue=5e-88, Organism=Homo sapiens, GI33286420, Length=492, Percent_Identity=38.6178861788618, Blast_Score=322, Evalue=5e-88, Organism=Homo sapiens, GI33286418, Length=492, Percent_Identity=38.4146341463415, Blast_Score=316, Evalue=4e-86, Organism=Homo sapiens, GI32967597, Length=491, Percent_Identity=38.2892057026477, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI10835121, Length=491, Percent_Identity=38.2892057026477, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI310128732, Length=290, Percent_Identity=40.6896551724138, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI310128730, Length=290, Percent_Identity=40.6896551724138, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI310128736, Length=233, Percent_Identity=39.0557939914163, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI310128734, Length=233, Percent_Identity=39.0557939914163, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=37.3831775700935, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI1787965, Length=468, Percent_Identity=41.6666666666667, Blast_Score=338, Evalue=6e-94, Organism=Escherichia coli, GI1788160, Length=482, Percent_Identity=40.2489626556017, Blast_Score=313, Evalue=2e-86, Organism=Caenorhabditis elegans, GI17544584, Length=481, Percent_Identity=38.6694386694387, Blast_Score=319, Evalue=2e-87, Organism=Caenorhabditis elegans, GI71984413, Length=485, Percent_Identity=40.2061855670103, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17506829, Length=485, Percent_Identity=40.2061855670103, Blast_Score=308, Evalue=5e-84, Organism=Caenorhabditis elegans, GI71984406, Length=485, Percent_Identity=40.2061855670103, Blast_Score=307, Evalue=8e-84, Organism=Caenorhabditis elegans, GI17506831, Length=485, Percent_Identity=40.2061855670103, Blast_Score=306, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=38.5567010309278, Blast_Score=302, Evalue=8e-83, Organism=Saccharomyces cerevisiae, GI6324923, Length=484, Percent_Identity=35.3305785123967, Blast_Score=277, Evalue=3e-75, Organism=Drosophila melanogaster, GI24648964, Length=493, Percent_Identity=39.9594320486815, Blast_Score=310, Evalue=1e-84, Organism=Drosophila melanogaster, GI28571814, Length=493, Percent_Identity=39.9594320486815, Blast_Score=310, Evalue=1e-84, Organism=Drosophila melanogaster, GI24648966, Length=416, Percent_Identity=38.9423076923077, Blast_Score=286, Evalue=2e-77, Organism=Drosophila melanogaster, GI24581235, Length=427, Percent_Identity=32.3185011709602, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24646914, Length=276, Percent_Identity=34.7826086956522, Blast_Score=166, Evalue=3e-41,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 52684; Mature: 52684
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIPDHKTKIVCTIGPASSSEEMIRKLMLAGMNVARINFSHGDFESHSRVVRIIRKVADE CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH LGRTIAILADLPGPKIRIGKLEKEPVMLHKGNPITLTIDDTPGNEERIPVSYKQLPESVT HCCEEEEEECCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHCCCCCC PGSLIYLSDGFIQLLCKEVTGKDVLCEVLIGGELYSHKGLNLPGAKIFLDAVTEKDFRIL CCEEEEECCHHHHHHHHHHCCCHHEEHEEECCEEECCCCCCCCCHHEEEEHHCCCCHHHH EFALEEDIDTFSISFVENAEDIRKVRNFAASRGKQVNIVSKIERRQAVENIGEILDETDA HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCE LMVARGDLGVEIPIQEVPSVQKELIQRAKLLGVPVITATHMLASMTDNIRPTRAEATDVA EEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH NAILDGTDAVMLSEETAVGNYPVEAVEMMAKIAKTTENWRSRTKWGLDTMIKSITAREMS HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC VDEVITLQVYEALQKLPVAAVLTPTRSGATPRRISRFNPDPWILAFSRVPKTCRFLSLSY HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCEEEEECCCCCHHEEEEEEC GVYPVAVNESIESWEKETTERTKELGFAKSKDLVIFTQGPASGKPGGTNMLKILTLD CEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MEIPDHKTKIVCTIGPASSSEEMIRKLMLAGMNVARINFSHGDFESHSRVVRIIRKVADE CCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH LGRTIAILADLPGPKIRIGKLEKEPVMLHKGNPITLTIDDTPGNEERIPVSYKQLPESVT HCCEEEEEECCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHCCCCCC PGSLIYLSDGFIQLLCKEVTGKDVLCEVLIGGELYSHKGLNLPGAKIFLDAVTEKDFRIL CCEEEEECCHHHHHHHHHHCCCHHEEHEEECCEEECCCCCCCCCHHEEEEHHCCCCHHHH EFALEEDIDTFSISFVENAEDIRKVRNFAASRGKQVNIVSKIERRQAVENIGEILDETDA HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCE LMVARGDLGVEIPIQEVPSVQKELIQRAKLLGVPVITATHMLASMTDNIRPTRAEATDVA EEEEECCCCEECCHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH NAILDGTDAVMLSEETAVGNYPVEAVEMMAKIAKTTENWRSRTKWGLDTMIKSITAREMS HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC VDEVITLQVYEALQKLPVAAVLTPTRSGATPRRISRFNPDPWILAFSRVPKTCRFLSLSY HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCEEEEECCCCCHHEEEEEEC GVYPVAVNESIESWEKETTERTKELGFAKSKDLVIFTQGPASGKPGGTNMLKILTLD CEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA