Click here to switch to the map view.

The map label for this gene is cdhC1 [H]

Identifier: 21226788

GI number: 21226788

Start: 822897

End: 824306

Strand: Direct

Name: cdhC1 [H]

Synonym: MM_0686

Alternate gene names: 21226788

Gene position: 822897-824306 (Clockwise)

Preceding gene: 21226787

Following gene: 21226789

Centisome position: 20.09

GC content: 48.3

Gene sequence:

>1410_bases
ATGGCAGAATTCCCATTTGAGATTTCCCCAATGTTTGAAGGAGAAAGAGTAAGGAAAGAAGGAATGTTCGTTGAACTCGG
TGGTCCAAAATCACTTGGTCTCGAACTTGTCAGGGCTGCAGACATGGATGCGATTGAAGACGACAAAGTCACAATCATCG
GTCCTGACCTCAAGGACATGGAAGAGGGAAAGACCTACCCCTGGGCAATGATCTTCAACATAGGCGGAGAACTTGTCGAG
CCTGACCTTGAGTCTGTCGTAGAAAGGCGTGTCCACGACTTCATCAACTACTGCCAGGGCATTATGCACCTGAACCAGAG
GTATGATGTCTGGATGAGAGTTTCCAAGGACACAGCTGCAAAGATGGACTCATTTGAGCCATTCGGAAAGGCAGTTATGA
TGCTCTTCAAGACAGAACTTCCATTTATCGAGAAGATGCAGGTAACTTTCTACACAGACAAGGATGAAGTCGAAAAGCAG
ATGGAAACAGCAAAGGAGATCTTCAAGGCAAGAGATGCAAGGACAAAGGACCTCCACGATGAAGATGTTGAAGTCTTCTA
TGGATGTACACTCTGCCAGTCCTTTGCTCCGACCAATGTCTGCGTTGTGTCTCCGGACAGGATCTCTCTCTGCGGTGCTA
TCAACTGGTTCGACGGCCGTGCAGCAGCAAAAGTAGACCCTGAAGGACCACAGTTTGAAATTGCAAAGGGTGACCTGCTC
GATGCAGTAACAGGGGAATACACAGGAGTCAACGAAATCGCAAAGAAGCTGTCAAGCGGCGAATTTGACAAGATAAAACT
CCACTCCTTCTTTGACTCACCACACACATCATGCGGCTGCTTTGAAGTTGTAGGGTTCTACATCCCTGAAGTCGATGGTA
TAGGATGGGTAGACAGAGAATACCAGGGAATGGCTCCGAACGGTATCGGATTCTCAACCATGGCAGGCCAGACCGGTGGT
GGAAAGCAGATCGTAGGGTTCCTCGGTATTGGTGTAAACTACTTCTACTCACCAAAGTTCATCCAGGCTGATGGCGGATG
GAACAGAGTTGTATGGCTGCCTTCCAAACTCAAAGAGAAGATCGACGAAGCAATACCCGCTGACCTCAAAGACAAGATCG
CAACAGAAAACGATGCAAGCGACATCGAGTCCCTGAAAGCCTTCCTCCAGGAGAAGAACCACCCTGTAGTTGCTACCTGG
GCAGCAGCTGAAGAAGAGGAAGAAGAAGAGGAAGAAGAAGAGGAAGTAGCTGTTGCAGCAGCTCCGATGATGATGCCAGC
AGCAGGATTCCAGATGCCGGCAATGCCAATGATGTCAGGCGGTTCAAGCGGTGGAATAAAGCTGACCTTCAAAAACGCAA
AGATCACCATTGACAGGATGATCATCAGCGAAAAGAAGGAAAAGAAATAA

Upstream 100 bases:

>100_bases
ACGCAACAATGTCTTTCGGAAACCTTAGCAAGGCAGAACACTACGCTGCCCTGGATGAGCTAGTTGATTTTTTATAATTT
GATTTAGGAGGCGAAATATA

Downstream 100 bases:

>100_bases
CTGAACAACAACGGGCAATTGCCTAAAACCGAAAAACAATCAAAAGGGGTATTCTGTGACCAAAGTAATTGCAATAACGG
GAAAAGGCGGAACTGGAAAA

Product: acetyl-CoA decarbonylase/synthase complex subunit beta

Products: CO2; AH2

Alternate protein names: ACDS complex subunit beta 1; ACDS complex acyltransferase 1 [H]

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MAEFPFEISPMFEGERVRKEGMFVELGGPKSLGLELVRAADMDAIEDDKVTIIGPDLKDMEEGKTYPWAMIFNIGGELVE
PDLESVVERRVHDFINYCQGIMHLNQRYDVWMRVSKDTAAKMDSFEPFGKAVMMLFKTELPFIEKMQVTFYTDKDEVEKQ
METAKEIFKARDARTKDLHDEDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAINWFDGRAAAKVDPEGPQFEIAKGDLL
DAVTGEYTGVNEIAKKLSSGEFDKIKLHSFFDSPHTSCGCFEVVGFYIPEVDGIGWVDREYQGMAPNGIGFSTMAGQTGG
GKQIVGFLGIGVNYFYSPKFIQADGGWNRVVWLPSKLKEKIDEAIPADLKDKIATENDASDIESLKAFLQEKNHPVVATW
AAAEEEEEEEEEEEEVAVAAAPMMMPAAGFQMPAMPMMSGGSSGGIKLTFKNAKITIDRMIISEKKEKK

Sequences:

>Translated_469_residues
MAEFPFEISPMFEGERVRKEGMFVELGGPKSLGLELVRAADMDAIEDDKVTIIGPDLKDMEEGKTYPWAMIFNIGGELVE
PDLESVVERRVHDFINYCQGIMHLNQRYDVWMRVSKDTAAKMDSFEPFGKAVMMLFKTELPFIEKMQVTFYTDKDEVEKQ
METAKEIFKARDARTKDLHDEDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAINWFDGRAAAKVDPEGPQFEIAKGDLL
DAVTGEYTGVNEIAKKLSSGEFDKIKLHSFFDSPHTSCGCFEVVGFYIPEVDGIGWVDREYQGMAPNGIGFSTMAGQTGG
GKQIVGFLGIGVNYFYSPKFIQADGGWNRVVWLPSKLKEKIDEAIPADLKDKIATENDASDIESLKAFLQEKNHPVVATW
AAAEEEEEEEEEEEEVAVAAAPMMMPAAGFQMPAMPMMSGGSSGGIKLTFKNAKITIDRMIISEKKEKK
>Mature_468_residues
AEFPFEISPMFEGERVRKEGMFVELGGPKSLGLELVRAADMDAIEDDKVTIIGPDLKDMEEGKTYPWAMIFNIGGELVEP
DLESVVERRVHDFINYCQGIMHLNQRYDVWMRVSKDTAAKMDSFEPFGKAVMMLFKTELPFIEKMQVTFYTDKDEVEKQM
ETAKEIFKARDARTKDLHDEDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAINWFDGRAAAKVDPEGPQFEIAKGDLLD
AVTGEYTGVNEIAKKLSSGEFDKIKLHSFFDSPHTSCGCFEVVGFYIPEVDGIGWVDREYQGMAPNGIGFSTMAGQTGGG
KQIVGFLGIGVNYFYSPKFIQADGGWNRVVWLPSKLKEKIDEAIPADLKDKIATENDASDIESLKAFLQEKNHPVVATWA
AAEEEEEEEEEEEEVAVAAAPMMMPAAGFQMPAMPMMSGGSSGGIKLTFKNAKITIDRMIISEKKEKK

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy [H]

COG id: COG1614

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdhC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004461
- InterPro:   IPR011254 [H]

Pfam domain/function: PF03598 CdhC [H]

EC number: 1.2.99.2

Molecular weight: Translated: 52233; Mature: 52102

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFPFEISPMFEGERVRKEGMFVELGGPKSLGLELVRAADMDAIEDDKVTIIGPDLKDM
CCCCCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHH
EEGKTYPWAMIFNIGGELVEPDLESVVERRVHDFINYCQGIMHLNQRYDVWMRVSKDTAA
HCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
KMDSFEPFGKAVMMLFKTELPFIEKMQVTFYTDKDEVEKQMETAKEIFKARDARTKDLHD
HHCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC
EDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAINWFDGRAAAKVDPEGPQFEIAKGDLL
CCCCEEEHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCEEEEECCCCCCEEEECCCHH
DAVTGEYTGVNEIAKKLSSGEFDKIKLHSFFDSPHTSCGCFEVVGFYIPEVDGIGWVDRE
HHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
YQGMAPNGIGFSTMAGQTGGGKQIVGFLGIGVNYFYSPKFIQADGGWNRVVWLPSKLKEK
CCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCEEEECCEEEECCCCCCEEEECHHHHHHH
IDEAIPADLKDKIATENDASDIESLKAFLQEKNHPVVATWAAAEEEEEEEEEEEEVAVAA
HHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
APMMMPAAGFQMPAMPMMSGGSSGGIKLTFKNAKITIDRMIISEKKEKK
CCHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEHHHHHHHHCCC
>Mature Secondary Structure 
AEFPFEISPMFEGERVRKEGMFVELGGPKSLGLELVRAADMDAIEDDKVTIIGPDLKDM
CCCCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHH
EEGKTYPWAMIFNIGGELVEPDLESVVERRVHDFINYCQGIMHLNQRYDVWMRVSKDTAA
HCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
KMDSFEPFGKAVMMLFKTELPFIEKMQVTFYTDKDEVEKQMETAKEIFKARDARTKDLHD
HHCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCC
EDVEVFYGCTLCQSFAPTNVCVVSPDRISLCGAINWFDGRAAAKVDPEGPQFEIAKGDLL
CCCCEEEHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCEEEEECCCCCCEEEECCCHH
DAVTGEYTGVNEIAKKLSSGEFDKIKLHSFFDSPHTSCGCFEVVGFYIPEVDGIGWVDRE
HHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
YQGMAPNGIGFSTMAGQTGGGKQIVGFLGIGVNYFYSPKFIQADGGWNRVVWLPSKLKEK
CCCCCCCCCCCHHCCCCCCCCCEEEEEEECCCEEEECCEEEECCCCCCEEEECHHHHHHH
IDEAIPADLKDKIATENDASDIESLKAFLQEKNHPVVATWAAAEEEEEEEEEEEEVAVAA
HHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
APMMMPAAGFQMPAMPMMSGGSSGGIKLTFKNAKITIDRMIISEKKEKK
CCHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CO; H2O; A

Specific reaction: CO + H2O + A = CO2 + AH2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8955306 [H]