Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226783
Identifier: 21226783
GI number: 21226783
Start: 817429
End: 817860
Strand: Reverse
Name: 21226783
Synonym: MM_0681
Alternate gene names: NA
Gene position: 817860-817429 (Counterclockwise)
Preceding gene: 21226784
Following gene: 21226782
Centisome position: 19.97
GC content: 43.06
Gene sequence:
>432_bases GTGGTGAGGCTGGATGAAGAGGCTTTTTCTCAGGACAGGTACTATCATCCCAGACCTGGTCCAGGGGAAAAAGTTCCTGT TCAGATCTTAAATTTCACCCGTGTCTTTGCAGCCTGGTCTCCAGAGCTGAAAGCCACTCTTTTTTTTGAAAAAGCTCCTG ATGAATCCGAAGCAGACGGGCTTAAAAGGGTGCGAGAAGTTGTCATTCTTTATGTCTATGACTGGCTTGCGGGAAGGGAA GGGATAATAGAACTTACAAATGCGGAGTTTGCACAGTTTATGGAGGTCTATGAAGCTTTTCTTCGGAAATTAGGGGAAAT CCAGTACAGCAGGGAGAAAAAAGGACGAAAAACTGAGAATGTCTTTGAACTTAAGGAATCTCCTTTCATTATCAGGGAAG TTAAAAAAGGTCCCTTCTCCGATAAATTATAA
Upstream 100 bases:
>100_bases CCCACACTGCCCACTTAAGCGGGCTCTTTGTCGGGCTTTACATGGGTTACCGTATAAAGAGAATGCATGATAAATACATT AGAACGAGGTTTGCCGGCAG
Downstream 100 bases:
>100_bases TTCTAGAAAATATATCCTGTGTTCTATAGCCAGAAATGTTTAATCTGAAGGGGTTTACTCATCTCGCAGGACTTATCTTT TCCGGGATTGGATAGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MVRLDEEAFSQDRYYHPRPGPGEKVPVQILNFTRVFAAWSPELKATLFFEKAPDESEADGLKRVREVVILYVYDWLAGRE GIIELTNAEFAQFMEVYEAFLRKLGEIQYSREKKGRKTENVFELKESPFIIREVKKGPFSDKL
Sequences:
>Translated_143_residues MVRLDEEAFSQDRYYHPRPGPGEKVPVQILNFTRVFAAWSPELKATLFFEKAPDESEADGLKRVREVVILYVYDWLAGRE GIIELTNAEFAQFMEVYEAFLRKLGEIQYSREKKGRKTENVFELKESPFIIREVKKGPFSDKL >Mature_143_residues MVRLDEEAFSQDRYYHPRPGPGEKVPVQILNFTRVFAAWSPELKATLFFEKAPDESEADGLKRVREVVILYVYDWLAGRE GIIELTNAEFAQFMEVYEAFLRKLGEIQYSREKKGRKTENVFELKESPFIIREVKKGPFSDKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16754; Mature: 16754
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRLDEEAFSQDRYYHPRPGPGEKVPVQILNFTRVFAAWSPELKATLFFEKAPDESEADG CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH LKRVREVVILYVYDWLAGREGIIELTNAEFAQFMEVYEAFLRKLGEIQYSREKKGRKTEN HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VFELKESPFIIREVKKGPFSDKL HHHHCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MVRLDEEAFSQDRYYHPRPGPGEKVPVQILNFTRVFAAWSPELKATLFFEKAPDESEADG CCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH LKRVREVVILYVYDWLAGREGIIELTNAEFAQFMEVYEAFLRKLGEIQYSREKKGRKTEN HHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VFELKESPFIIREVKKGPFSDKL HHHHCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA