Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is ilvC [H]
Identifier: 21226770
GI number: 21226770
Start: 801128
End: 802135
Strand: Reverse
Name: ilvC [H]
Synonym: MM_0668
Alternate gene names: 21226770
Gene position: 802135-801128 (Counterclockwise)
Preceding gene: 21226771
Following gene: 21226769
Centisome position: 19.58
GC content: 51.49
Gene sequence:
>1008_bases ATGGCAACGATAATTTATGACGACGAAACCACTTTTGATGCACTTAAGGACAGGACCATCGCAGTAATGGGTTACGGAAG CCAGGGGCACGCCCATGCCAGGAACCTCCACGAATCCGGGCTTAATGTTATTGTCGGGCTCAGGCAGGGAAGTTCAAGCT GGGCAAAAGCCGAGTCTGACGGTCTTAAAGTCATGACTGTTGACGACGCCTCCAGAGCTGCGGATGTTATCATGATCCTC CTCCCTGACGAAAAGCAGGCAGCAGTTTACTATTCTCAGATTGAGCCCAACCTGAAAGCCGGAGACGCCCTTGTTTTTGC TCACGGCTTCAACATCCACTATAACCAGATAGTGCCTCCAAAAGATGTCGACGTCTTCATGGTTGCCCCCAAAGGTCCCG GGCACATTGTCAGGAGGACCTACACTGAAGGCATCGGGGTTCCGGGCCTGATCGCAGTCTACCAGGACGCGACCGGAAAA GCCAGAGACCTTGCTCTTTCTTATGCAAAGGGAATAGGCGCCACAAGGGCGGGAGTCTATGAGACCACTTTCCGTGAAGA AACCGAAACCGATCTCTTCGGAGAACAGGTTGACCTCTGCGGAGGGCTTTCTGCACTTATCAAGACCGCTTTTGAAGTGC TTGTAGAAGCAGGGTACCAGCCGGAAATGGCTTACTTTGAGACCTGCCACGAAGTTAAACTCATTGTTGACCTTATCTAC GAAGGCGGGCTTGAGAGAATGTGGCACTCAGTTTCCAATACTGCCGAATATGGTGGCATGACAGTTGGTCCCAGGGTCAT CAACGAGTATTCCCGTGAAGCCATGTACGAGGCACTTGAGAGGATCCAGAACGGAGAGTTCGCAAAAGAGTTCGTACTCG AAGGCATGGTCAACCACCCTGTTCTTAAAGCCATGGAACGCCAGGAAAAGGAACACCAGCTTGAGGTTGTCGGAAAACAG ATCCGTGCAAACATCCCCTGGCTCAACAAGAAGATTGATGACGACTGA
Upstream 100 bases:
>100_bases TAATTCTAAAATTAAATTCTATAATTCAATTTTAAAATTAAGGAATTAAAGGAAAGGAATTAAAGAATAATCAGTTAAAA ATCAATCAGGAGAATCGAGA
Downstream 100 bases:
>100_bases ACGTGAAATTGCTCTTTCTCATTTCTAGCCAGGTCAGTTATATGGCCTGGCAGGCTCATTTTTTATGAAACATTTCCTTG ATGGTTCATTTTTCTCGTTG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MATIIYDDETTFDALKDRTIAVMGYGSQGHAHARNLHESGLNVIVGLRQGSSSWAKAESDGLKVMTVDDASRAADVIMIL LPDEKQAAVYYSQIEPNLKAGDALVFAHGFNIHYNQIVPPKDVDVFMVAPKGPGHIVRRTYTEGIGVPGLIAVYQDATGK ARDLALSYAKGIGATRAGVYETTFREETETDLFGEQVDLCGGLSALIKTAFEVLVEAGYQPEMAYFETCHEVKLIVDLIY EGGLERMWHSVSNTAEYGGMTVGPRVINEYSREAMYEALERIQNGEFAKEFVLEGMVNHPVLKAMERQEKEHQLEVVGKQ IRANIPWLNKKIDDD
Sequences:
>Translated_335_residues MATIIYDDETTFDALKDRTIAVMGYGSQGHAHARNLHESGLNVIVGLRQGSSSWAKAESDGLKVMTVDDASRAADVIMIL LPDEKQAAVYYSQIEPNLKAGDALVFAHGFNIHYNQIVPPKDVDVFMVAPKGPGHIVRRTYTEGIGVPGLIAVYQDATGK ARDLALSYAKGIGATRAGVYETTFREETETDLFGEQVDLCGGLSALIKTAFEVLVEAGYQPEMAYFETCHEVKLIVDLIY EGGLERMWHSVSNTAEYGGMTVGPRVINEYSREAMYEALERIQNGEFAKEFVLEGMVNHPVLKAMERQEKEHQLEVVGKQ IRANIPWLNKKIDDD >Mature_334_residues ATIIYDDETTFDALKDRTIAVMGYGSQGHAHARNLHESGLNVIVGLRQGSSSWAKAESDGLKVMTVDDASRAADVIMILL PDEKQAAVYYSQIEPNLKAGDALVFAHGFNIHYNQIVPPKDVDVFMVAPKGPGHIVRRTYTEGIGVPGLIAVYQDATGKA RDLALSYAKGIGATRAGVYETTFREETETDLFGEQVDLCGGLSALIKTAFEVLVEAGYQPEMAYFETCHEVKLIVDLIYE GGLERMWHSVSNTAEYGGMTVGPRVINEYSREAMYEALERIQNGEFAKEFVLEGMVNHPVLKAMERQEKEHQLEVVGKQI RANIPWLNKKIDDD
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=283, Percent_Identity=34.982332155477, Blast_Score=143, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6323387, Length=335, Percent_Identity=35.5223880597015, Blast_Score=162, Evalue=8e-41,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 37063; Mature: 36932
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIIYDDETTFDALKDRTIAVMGYGSQGHAHARNLHESGLNVIVGLRQGSSSWAKAESD CEEEEECCCCHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCC GLKVMTVDDASRAADVIMILLPDEKQAAVYYSQIEPNLKAGDALVFAHGFNIHYNQIVPP CEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCEEECCCCCC KDVDVFMVAPKGPGHIVRRTYTEGIGVPGLIAVYQDATGKARDLALSYAKGIGATRAGVY CCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC ETTFREETETDLFGEQVDLCGGLSALIKTAFEVLVEAGYQPEMAYFETCHEVKLIVDLIY HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLERMWHSVSNTAEYGGMTVGPRVINEYSREAMYEALERIQNGEFAKEFVLEGMVNHP HCCHHHHHHHHHCHHHHCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH VLKAMERQEKEHQLEVVGKQIRANIPWLNKKIDDD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ATIIYDDETTFDALKDRTIAVMGYGSQGHAHARNLHESGLNVIVGLRQGSSSWAKAESD EEEEECCCCHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCC GLKVMTVDDASRAADVIMILLPDEKQAAVYYSQIEPNLKAGDALVFAHGFNIHYNQIVPP CEEEEEECCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEECCCEEECCCCCC KDVDVFMVAPKGPGHIVRRTYTEGIGVPGLIAVYQDATGKARDLALSYAKGIGATRAGVY CCCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC ETTFREETETDLFGEQVDLCGGLSALIKTAFEVLVEAGYQPEMAYFETCHEVKLIVDLIY HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLERMWHSVSNTAEYGGMTVGPRVINEYSREAMYEALERIQNGEFAKEFVLEGMVNHP HCCHHHHHHHHHCHHHHCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH VLKAMERQEKEHQLEVVGKQIRANIPWLNKKIDDD HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]