Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226767
Identifier: 21226767
GI number: 21226767
Start: 796888
End: 797757
Strand: Reverse
Name: 21226767
Synonym: MM_0665
Alternate gene names: NA
Gene position: 797757-796888 (Counterclockwise)
Preceding gene: 21226769
Following gene: 21226764
Centisome position: 19.47
GC content: 38.62
Gene sequence:
>870_bases GTGGAAAAAAATATTTTTGCTGCAAATTTAGGGAGTAAAGTTTCTGCTGCAGACGAAATCAACACTTCTGCTTCACTTAT CAACAGTGCTGAGACTCGAATTATGTCTGTAAGGCAGGACGTAGAGTCTAGCACCTATTCTAATGCAAAAATTAATCTGA ATGCCTCAGAGACTGATTTTGAGGAAGCTTTAAAGATTCTCAATAATGCCTCTTCGGATTATGAGGAGGAAATTCAGGAC ATTGAGACATATAAAACTCTAGCTGAAGGCGGCCTGGATAGGGTTCATTCTCTGGAGAGTCTGATTACAGCTATGGAACA TTCAGATAAATCCATGGCATATGCATATTCAAAAGAATTCAACCTGAGCAGAAAAGAACTTAATATAGCGAATGAAGCTT TAAATGAGTCTGCTGCTTCATCAATCTCGGCAAAAGAAAAAGTCTTTACGATCGATCCTAAGTCAGTACCGATAGAGCAA AAGAGTTCTATTATTCTGTTAAGAAACGATCTGGAAGCCAGCGAAACTATGCACAGCGAATTAAGACAGATGATGAGCGG AATGTATCCATACATGGACGGGTATGTGTGTCTTTCAAATGGAATAGAATATGGTGACGCTGAGGAATGGGGTAAAGCTG CCGATGAATTTGGAAAAGCTTCTGATAAGTTTTCTGAATCTCAAAAGATTCTGGAGACACTGAAAGATTCAGAGTATTCA GAGGTTTCTGTGACAGCCATCGAAATTTGCGGAATTCTGACTCAAGCGCAAAAAGATTTGCCACATATCGAAGCTGGCTG CAGATATATGGAAAAAGGCCGTTATTATCAGGCAAATGCAGAATTCAATAATGTTTCTTATTATTATTAA
Upstream 100 bases:
>100_bases TTGGGGGTTGAGAAATATGGGGATAAAAAAGAACATAATTATTGGCAGAACCGTTCTGGTTCTTCTGGGACTTGCATTGA TTACTTTTTGCTCCGGGTGT
Downstream 100 bases:
>100_bases TCCTGCTAAAAACACAATACAAAGAAACTGAGATAAAAGAATAATAAATGAAGAAGTTTCATCTTTCTTTTATCTCACTG CTATTTCATTACTACTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MEKNIFAANLGSKVSAADEINTSASLINSAETRIMSVRQDVESSTYSNAKINLNASETDFEEALKILNNASSDYEEEIQD IETYKTLAEGGLDRVHSLESLITAMEHSDKSMAYAYSKEFNLSRKELNIANEALNESAASSISAKEKVFTIDPKSVPIEQ KSSIILLRNDLEASETMHSELRQMMSGMYPYMDGYVCLSNGIEYGDAEEWGKAADEFGKASDKFSESQKILETLKDSEYS EVSVTAIEICGILTQAQKDLPHIEAGCRYMEKGRYYQANAEFNNVSYYY
Sequences:
>Translated_289_residues MEKNIFAANLGSKVSAADEINTSASLINSAETRIMSVRQDVESSTYSNAKINLNASETDFEEALKILNNASSDYEEEIQD IETYKTLAEGGLDRVHSLESLITAMEHSDKSMAYAYSKEFNLSRKELNIANEALNESAASSISAKEKVFTIDPKSVPIEQ KSSIILLRNDLEASETMHSELRQMMSGMYPYMDGYVCLSNGIEYGDAEEWGKAADEFGKASDKFSESQKILETLKDSEYS EVSVTAIEICGILTQAQKDLPHIEAGCRYMEKGRYYQANAEFNNVSYYY >Mature_289_residues MEKNIFAANLGSKVSAADEINTSASLINSAETRIMSVRQDVESSTYSNAKINLNASETDFEEALKILNNASSDYEEEIQD IETYKTLAEGGLDRVHSLESLITAMEHSDKSMAYAYSKEFNLSRKELNIANEALNESAASSISAKEKVFTIDPKSVPIEQ KSSIILLRNDLEASETMHSELRQMMSGMYPYMDGYVCLSNGIEYGDAEEWGKAADEFGKASDKFSESQKILETLKDSEYS EVSVTAIEICGILTQAQKDLPHIEAGCRYMEKGRYYQANAEFNNVSYYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32251; Mature: 32251
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNIFAANLGSKVSAADEINTSASLINSAETRIMSVRQDVESSTYSNAKINLNASETDF CCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH EEALKILNNASSDYEEEIQDIETYKTLAEGGLDRVHSLESLITAMEHSDKSMAYAYSKEF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCC NLSRKELNIANEALNESAASSISAKEKVFTIDPKSVPIEQKSSIILLRNDLEASETMHSE CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHH LRQMMSGMYPYMDGYVCLSNGIEYGDAEEWGKAADEFGKASDKFSESQKILETLKDSEYS HHHHHHCCCCHHCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC EVSVTAIEICGILTQAQKDLPHIEAGCRYMEKGRYYQANAEFNNVSYYY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCCC >Mature Secondary Structure MEKNIFAANLGSKVSAADEINTSASLINSAETRIMSVRQDVESSTYSNAKINLNASETDF CCCCEEEECCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCH EEALKILNNASSDYEEEIQDIETYKTLAEGGLDRVHSLESLITAMEHSDKSMAYAYSKEF HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCC NLSRKELNIANEALNESAASSISAKEKVFTIDPKSVPIEQKSSIILLRNDLEASETMHSE CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHH LRQMMSGMYPYMDGYVCLSNGIEYGDAEEWGKAADEFGKASDKFSESQKILETLKDSEYS HHHHHHCCCCHHCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC EVSVTAIEICGILTQAQKDLPHIEAGCRYMEKGRYYQANAEFNNVSYYY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA