Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is arsR [C]
Identifier: 21226764
GI number: 21226764
Start: 792967
End: 793386
Strand: Reverse
Name: arsR [C]
Synonym: MM_0662
Alternate gene names: 21226764
Gene position: 793386-792967 (Counterclockwise)
Preceding gene: 21226767
Following gene: 21226763
Centisome position: 19.37
GC content: 40.24
Gene sequence:
>420_bases ATGCTTTATAATAAAGTAAAATTCTTTAAAGCCCTCGGGGATGAGACCCGGCTTACTATTCTCTCTTATCTGCTCGAGCA TAGCTACTGTGCCTGTGATTTTTCATCCCTTACAAAAAAAGACCAGACAACCGTTTCAAAACATTTGAAGGTTCTTGTTG AAGCTGATATTTTAAAGTACGAAAAAAAGGGACGAAACATAATTTACAGCATTAAAAACAGGGAGATAGAATGCCTGTTA AGATCTCTTGGAATCAGGGATGTAAAACCCTGTTGCGACAGGCAACAGGCATCCTGGCTCTGTTTTTCGGTCGTGGCTGA AAACAGAGCTGGAAATCTTATCGATGAGGAGATTGAAGACCGGGCTGAAAGCGAAGCTAAGGATAAGTCGAAAGTAAACC TTCAGGCAAAAAAGAAATGA
Upstream 100 bases:
>100_bases TCTAGCCTCTTTTCAGTCTTTATTTTATTCTGCTTTTCCCTTTTTAATAGCAAGTTTTCTCAAATAATATATTGATATAT GCTCATATATCCATATAACA
Downstream 100 bases:
>100_bases AGTTAAACAAAAATGAGGTAAAATAATGGACGCAAAATAATGGACGCGAACGAGAAAAAAGAAGTCATCAAGAAGAGATT TCAGGAAATTGCAATGTCAG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MLYNKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEADILKYEKKGRNIIYSIKNREIECLL RSLGIRDVKPCCDRQQASWLCFSVVAENRAGNLIDEEIEDRAESEAKDKSKVNLQAKKK
Sequences:
>Translated_139_residues MLYNKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEADILKYEKKGRNIIYSIKNREIECLL RSLGIRDVKPCCDRQQASWLCFSVVAENRAGNLIDEEIEDRAESEAKDKSKVNLQAKKK >Mature_139_residues MLYNKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEADILKYEKKGRNIIYSIKNREIECLL RSLGIRDVKPCCDRQQASWLCFSVVAENRAGNLIDEEIEDRAESEAKDKSKVNLQAKKK
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16023; Mature: 16023
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYNKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEADILKY CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHH EKKGRNIIYSIKNREIECLLRSLGIRDVKPCCDRQQASWLCFSVVAENRAGNLIDEEIED HHCCCEEEEEECCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH RAESEAKDKSKVNLQAKKK HHHHHHCCHHHCCEEECCC >Mature Secondary Structure MLYNKVKFFKALGDETRLTILSYLLEHSYCACDFSSLTKKDQTTVSKHLKVLVEADILKY CCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHH EKKGRNIIYSIKNREIECLLRSLGIRDVKPCCDRQQASWLCFSVVAENRAGNLIDEEIED HHCCCEEEEEECCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH RAESEAKDKSKVNLQAKKK HHHHHHCCHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA