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The map label for this gene is 21226665

Identifier: 21226665

GI number: 21226665

Start: 688397

End: 689272

Strand: Reverse

Name: 21226665

Synonym: MM_0563

Alternate gene names: NA

Gene position: 689272-688397 (Counterclockwise)

Preceding gene: 21226666

Following gene: 21226664

Centisome position: 16.83

GC content: 37.79

Gene sequence:

>876_bases
ATGGCTAATACTCGAGAATACTTACTTGTTTGGGACAGTACAATGGCAAACCCAAACGGAGACATGCTAAACGATAACAA
GCCCAGGCATGATGAAATTACAGGCCAGCTTGAGGTTTCTGATGTTAGAATAAAGCGTTTTGTCAGAGATGAATGGCAAT
CGAGGGGTCATAATGTGCTTGTCAGGACGAAAAAAGGTGATGATGGAAAAGTAATGTCCTGTACTGCTTTGATTAAAGAG
GTTATGGAAAAAGCTAAAGTAAAAGAGGCTGAACTTCCAAGTCACCTATTAAACGAATATATTGATGTCAGGCTATTTGG
TGCAGTAATTACCAAGCCTAAGTACGATATTACAGGCCCCTTACAGGTAATGTGGAGCAAATCTGTCAATCCTGCAGAAA
TAAAATTCATGCAAGGCAATTCTGCTTATGCAGGTGGGGAAGGAAAAAGTCAGTCTACAATCTGGTCCAAGTACATATCC
CCTTATGCAATTTTCAAAACTTATGCTGTTTATAATGATAACGCAGCAAAAAGGCAGGGTATTGAAACTAGTGAAAAGGA
TTTGAATGAGTTCACCGCAGCACTAATTAATGGGCTAATTAATTATAGAAGTACTTCCAAAAACCAGATGCCAAGACTAC
TAGTTGAAGTGATCTACAAGGAACACAGGATTGATGGAGAGCTCAATTATGTAGATGTTAATTTTGACACTGAAGCGGAG
GAAGTAAGAGATATATCTCAGGTTACTCTTGACCTTGAAAAACTTTGCAAATATTATGATTGCAAAAAAGAATCAATAGA
TACTGTACGCATATACAAACACGGCAGTGTAAAAGTGAATAACCTCCCGGATGATTTTAAGGTAATTGACTTTTAA

Upstream 100 bases:

>100_bases
GTCAAGTGATGAAGCCAAATATATTTTCTTTTGGGGAATGCAGCAGTGGATTGGAAAATCAAAGGACAGTAATAACAATA
ATGATGGAGCGGATCAATAA

Downstream 100 bases:

>100_bases
TTGAGAGGCGTTCTTTAATGGACTGCTTGGTTTTTAGGGCAAAAAGTGGATATGCTAAGTTCCGAAAACCGTATACCACT
ACATCAGCTCTCACCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Protein; Crispr-Associated Protein Csh2 Family; CRISPR-Associated Csd2 Family Protein; Csh2 Family CRISPR-Associated Protein; Csd2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MANTREYLLVWDSTMANPNGDMLNDNKPRHDEITGQLEVSDVRIKRFVRDEWQSRGHNVLVRTKKGDDGKVMSCTALIKE
VMEKAKVKEAELPSHLLNEYIDVRLFGAVITKPKYDITGPLQVMWSKSVNPAEIKFMQGNSAYAGGEGKSQSTIWSKYIS
PYAIFKTYAVYNDNAAKRQGIETSEKDLNEFTAALINGLINYRSTSKNQMPRLLVEVIYKEHRIDGELNYVDVNFDTEAE
EVRDISQVTLDLEKLCKYYDCKKESIDTVRIYKHGSVKVNNLPDDFKVIDF

Sequences:

>Translated_291_residues
MANTREYLLVWDSTMANPNGDMLNDNKPRHDEITGQLEVSDVRIKRFVRDEWQSRGHNVLVRTKKGDDGKVMSCTALIKE
VMEKAKVKEAELPSHLLNEYIDVRLFGAVITKPKYDITGPLQVMWSKSVNPAEIKFMQGNSAYAGGEGKSQSTIWSKYIS
PYAIFKTYAVYNDNAAKRQGIETSEKDLNEFTAALINGLINYRSTSKNQMPRLLVEVIYKEHRIDGELNYVDVNFDTEAE
EVRDISQVTLDLEKLCKYYDCKKESIDTVRIYKHGSVKVNNLPDDFKVIDF
>Mature_290_residues
ANTREYLLVWDSTMANPNGDMLNDNKPRHDEITGQLEVSDVRIKRFVRDEWQSRGHNVLVRTKKGDDGKVMSCTALIKEV
MEKAKVKEAELPSHLLNEYIDVRLFGAVITKPKYDITGPLQVMWSKSVNPAEIKFMQGNSAYAGGEGKSQSTIWSKYISP
YAIFKTYAVYNDNAAKRQGIETSEKDLNEFTAALINGLINYRSTSKNQMPRLLVEVIYKEHRIDGELNYVDVNFDTEAEE
VRDISQVTLDLEKLCKYYDCKKESIDTVRIYKHGSVKVNNLPDDFKVIDF

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33339; Mature: 33208

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTREYLLVWDSTMANPNGDMLNDNKPRHDEITGQLEVSDVRIKRFVRDEWQSRGHNVL
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEE
VRTKKGDDGKVMSCTALIKEVMEKAKVKEAELPSHLLNEYIDVRLFGAVITKPKYDITGP
EEECCCCCCCEEHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHEEHHHCCCCCCCCCC
LQVMWSKSVNPAEIKFMQGNSAYAGGEGKSQSTIWSKYISPYAIFKTYAVYNDNAAKRQG
HHEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHEEEEECCCHHHHCC
IETSEKDLNEFTAALINGLINYRSTSKNQMPRLLVEVIYKEHRIDGELNYVDVNFDTEAE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
EVRDISQVTLDLEKLCKYYDCKKESIDTVRIYKHGSVKVNNLPDDFKVIDF
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCCEEECC
>Mature Secondary Structure 
ANTREYLLVWDSTMANPNGDMLNDNKPRHDEITGQLEVSDVRIKRFVRDEWQSRGHNVL
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEE
VRTKKGDDGKVMSCTALIKEVMEKAKVKEAELPSHLLNEYIDVRLFGAVITKPKYDITGP
EEECCCCCCCEEHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHEEHHHCCCCCCCCCC
LQVMWSKSVNPAEIKFMQGNSAYAGGEGKSQSTIWSKYISPYAIFKTYAVYNDNAAKRQG
HHEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHEEEEECCCHHHHCC
IETSEKDLNEFTAALINGLINYRSTSKNQMPRLLVEVIYKEHRIDGELNYVDVNFDTEAE
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHH
EVRDISQVTLDLEKLCKYYDCKKESIDTVRIYKHGSVKVNNLPDDFKVIDF
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA