Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226660
Identifier: 21226660
GI number: 21226660
Start: 683334
End: 683624
Strand: Reverse
Name: 21226660
Synonym: MM_0558
Alternate gene names: NA
Gene position: 683624-683334 (Counterclockwise)
Preceding gene: 21226661
Following gene: 21226659
Centisome position: 16.69
GC content: 38.14
Gene sequence:
>291_bases TTGCTTGTCTGGGTAATATATGATATTACGGAAAACAGGATTCGTCAGAAAGTTAGCGACTGCTGTAAGAGCTACGGGCT TTACAGGGTTCAGAAAAGTGTTTTTCTTGGAGACCTTAATTCAAACGATAGAGACTCTCTTGCTCTTGAATGTGAAGAGT GGATTGATACAGAGAAAGATTCTGTGTATGTTTTTCCAATGGATGAACAGTCTTTTAAACAGGTTAAGCTGATAGGCCAG GCTTTTGATAAGGAACTTGTCAGCGACGAGATAATTACAAAATTCTTTTGA
Upstream 100 bases:
>100_bases GCTACAGGGGCAGGAACATAAAAATTGGAAATACAATCCAGTTCGACTGCCACAGGATTGCAAACAGTCTTATCGGGAAA TAAATGCAGGGGGATTGAAT
Downstream 100 bases:
>100_bases ATTCTTTGGAGAAAAGTATGGCAGATTCTGAATTTGTTCCAGGCGAAGAAGCTGAAACTGATGCTGAAATTATCAATGGA GTACCCGGTGATTTGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLVWVIYDITENRIRQKVSDCCKSYGLYRVQKSVFLGDLNSNDRDSLALECEEWIDTEKDSVYVFPMDEQSFKQVKLIGQ AFDKELVSDEIITKFF
Sequences:
>Translated_96_residues MLVWVIYDITENRIRQKVSDCCKSYGLYRVQKSVFLGDLNSNDRDSLALECEEWIDTEKDSVYVFPMDEQSFKQVKLIGQ AFDKELVSDEIITKFF >Mature_96_residues MLVWVIYDITENRIRQKVSDCCKSYGLYRVQKSVFLGDLNSNDRDSLALECEEWIDTEKDSVYVFPMDEQSFKQVKLIGQ AFDKELVSDEIITKFF
Specific function: Unknown
COG id: COG1343
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11315; Mature: 11315
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVWVIYDITENRIRQKVSDCCKSYGLYRVQKSVFLGDLNSNDRDSLALECEEWIDTEKD CEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCEEEEHHHHCCCCCC SVYVFPMDEQSFKQVKLIGQAFDKELVSDEIITKFF CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLVWVIYDITENRIRQKVSDCCKSYGLYRVQKSVFLGDLNSNDRDSLALECEEWIDTEKD CEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCCEEEEHHHHCCCCCC SVYVFPMDEQSFKQVKLIGQAFDKELVSDEIITKFF CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA