Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226643
Identifier: 21226643
GI number: 21226643
Start: 670076
End: 670417
Strand: Reverse
Name: 21226643
Synonym: MM_0541
Alternate gene names: NA
Gene position: 670417-670076 (Counterclockwise)
Preceding gene: 21226645
Following gene: 21226642
Centisome position: 16.37
GC content: 46.49
Gene sequence:
>342_bases ATGGACATAGTCCCGGCTTCCATAACGCTTAACAGATATGAGAAAAAGGTCTGGGTTCCCCTATCCACCGAACTGACAGG AGAGAGCGATGAATATCTCTACTTCACTTCAGAAGTTCCAGGGTATGCTTCGTTTGTGATAACGGGCAATACCACCCAGG AGGTACTGGAAGAAGAGAGCGATCAGGTCCCCTCTGAAAGCAGGTCCACTGACGGATTTCAACTGGGGGATTTCGCAAAA AAAGCCGGGTCTGATAAGAACAGAAATACCATACTGAGCATCGTGATAGTGGTTGTAGCCCTATCGGTAGTGGTTGTTCT GTTAAAAGGCATGAAAGAATAA
Upstream 100 bases:
>100_bases ATCCTTTAATGTCTGGGTAGGAAACGCAGGATATTCGACCTCAAACAAAATAGATAACCGTGCCCTGGGCTTCAGGGTAA ATAAAGAATGGGTCCGGGAA
Downstream 100 bases:
>100_bases AACATTAAATGATAAAGAATGCGTGAATAAAGCATTGGAGCTGGCATAATCAACGTCTGGCATAATCAACGTCTGGCATA ATCAATGGTTTTGCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDIVPASITLNRYEKKVWVPLSTELTGESDEYLYFTSEVPGYASFVITGNTTQEVLEEESDQVPSESRSTDGFQLGDFAK KAGSDKNRNTILSIVIVVVALSVVVVLLKGMKE
Sequences:
>Translated_113_residues MDIVPASITLNRYEKKVWVPLSTELTGESDEYLYFTSEVPGYASFVITGNTTQEVLEEESDQVPSESRSTDGFQLGDFAK KAGSDKNRNTILSIVIVVVALSVVVVLLKGMKE >Mature_113_residues MDIVPASITLNRYEKKVWVPLSTELTGESDEYLYFTSEVPGYASFVITGNTTQEVLEEESDQVPSESRSTDGFQLGDFAK KAGSDKNRNTILSIVIVVVALSVVVVLLKGMKE
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12421; Mature: 12421
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVPASITLNRYEKKVWVPLSTELTGESDEYLYFTSEVPGYASFVITGNTTQEVLEEES CCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHH DQVPSESRSTDGFQLGDFAKKAGSDKNRNTILSIVIVVVALSVVVVLLKGMKE HCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIVPASITLNRYEKKVWVPLSTELTGESDEYLYFTSEVPGYASFVITGNTTQEVLEEES CCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHH DQVPSESRSTDGFQLGDFAKKAGSDKNRNTILSIVIVVVALSVVVVLLKGMKE HCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA