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The map label for this gene is yrkC [H]

Identifier: 21226639

GI number: 21226639

Start: 667417

End: 667824

Strand: Direct

Name: yrkC [H]

Synonym: MM_0537

Alternate gene names: 21226639

Gene position: 667417-667824 (Clockwise)

Preceding gene: 21226624

Following gene: 21226640

Centisome position: 16.29

GC content: 46.32

Gene sequence:

>408_bases
TTGAAAAACATGAAAGGATTTTCTATCAATATCGAAGATGCTACTCTGGAAAATGAAAATTTCCGCAAGGTTCTCTACAC
CTCAAAGCACAGCCAGCTGGTATTAATGACCCTTAAGCCAGGGGAAGACATTGGAATGGAAGTCCACGAAGAAAACGACC
AGTTCTTCCGTTTTGAGGCAGGACAGGGCAAGTGCATAATTGACGGCAACGAATACGAACTCAGTGACGGAGTCGCAGTC
GTCGTACCCGCAGGTGCTGAGCACAATATCATCAATACCTCAAACACTGAAGAACTGAAGCTCTACACAATCTATTCCCC
GGCACACCACAAAGACGGGATCGTGCGCGCCACAAAAGAAGAAGCAGAAGCAAATGAAGCAGACTTCGACGGCGTGACTA
CAGAATAA

Upstream 100 bases:

>100_bases
TCAATAAATAATCAGCCTTCCCATAATAAGGAAATGTTGTGTTTCAATTTATATAATAACTGCTGTAGCACACAAAAGTT
CTATATACAATTACCGTTAA

Downstream 100 bases:

>100_bases
GGCTTAAATTAGAATTTTTTAAGCATTAAATACACAGAATAAAACGCTTTCTTAAAATAAAGCGTTTTTACCTTTTTTAT
TTAGATTTTTTATTTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKNMKGFSINIEDATLENENFRKVLYTSKHSQLVLMTLKPGEDIGMEVHEENDQFFRFEAGQGKCIIDGNEYELSDGVAV
VVPAGAEHNIINTSNTEELKLYTIYSPAHHKDGIVRATKEEAEANEADFDGVTTE

Sequences:

>Translated_135_residues
MKNMKGFSINIEDATLENENFRKVLYTSKHSQLVLMTLKPGEDIGMEVHEENDQFFRFEAGQGKCIIDGNEYELSDGVAV
VVPAGAEHNIINTSNTEELKLYTIYSPAHHKDGIVRATKEEAEANEADFDGVTTE
>Mature_135_residues
MKNMKGFSINIEDATLENENFRKVLYTSKHSQLVLMTLKPGEDIGMEVHEENDQFFRFEAGQGKCIIDGNEYELSDGVAV
VVPAGAEHNIINTSNTEELKLYTIYSPAHHKDGIVRATKEEAEANEADFDGVTTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 15081; Mature: 15081

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMKGFSINIEDATLENENFRKVLYTSKHSQLVLMTLKPGEDIGMEVHEENDQFFRFEA
CCCCCCCEEEECCCEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCEEEEEEC
GQGKCIIDGNEYELSDGVAVVVPAGAEHNIINTSNTEELKLYTIYSPAHHKDGIVRATKE
CCCEEEECCCEEEECCCEEEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCEEEECCC
EAEANEADFDGVTTE
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNMKGFSINIEDATLENENFRKVLYTSKHSQLVLMTLKPGEDIGMEVHEENDQFFRFEA
CCCCCCCEEEECCCEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCEEEEEEC
GQGKCIIDGNEYELSDGVAVVVPAGAEHNIINTSNTEELKLYTIYSPAHHKDGIVRATKE
CCCEEEECCCEEEECCCEEEEEECCCCCCEEECCCCCEEEEEEEECCCCCCCCEEEECCC
EAEANEADFDGVTTE
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]