The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226633

Identifier: 21226633

GI number: 21226633

Start: 660579

End: 660938

Strand: Reverse

Name: 21226633

Synonym: MM_0531

Alternate gene names: NA

Gene position: 660938-660579 (Counterclockwise)

Preceding gene: 21226634

Following gene: 21226632

Centisome position: 16.13

GC content: 33.61

Gene sequence:

>360_bases
TTGAAACAGAAGCGAATTAAAAAGACAGTTAGAAAGTTCAGTGATTTAATTGAAAGAAATAAGGATAGACGAGCTTATTC
TGATTATAAAGAAGGGATAAATGAAGGCCTGGAAATAGCTAAAGACACTTTTGAAGACAACGTAGAAAAGTTTCTTTCTA
CGTCTACAGATGAAGATCCTCAAACAAAGATACGCAGCCTTCAGGATAGATTTAACCTGATTATAGATACGATCGTTGTT
AAAGAAAAACCAAATTATTCTCAGGACCATCTGGACGGAATATACGAAGGGTTCGAAAAATCCAAAAAGATATTTGAAAA
TTGTATACAGGAATACTATCATTCTGATTCGGAATCCTGA

Upstream 100 bases:

>100_bases
TAAATAATGGAAAATAAATGCTCTAACCAGATTCCACCAGTACAGGATTTGATTTTTTCTTTTGTTGCTCAGTTTATGTT
TTTGTCAGGGAGGGAGGAGT

Downstream 100 bases:

>100_bases
TCTCACTTCTGCCAGCGTTCATTTCGACAAAGAAAGTTTGCCTCAATTATTTTAATCGATAGTTCTGCTTGATCCTGATG
CTGAGGAACTATCAGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKQKRIKKTVRKFSDLIERNKDRRAYSDYKEGINEGLEIAKDTFEDNVEKFLSTSTDEDPQTKIRSLQDRFNLIIDTIVV
KEKPNYSQDHLDGIYEGFEKSKKIFENCIQEYYHSDSES

Sequences:

>Translated_119_residues
MKQKRIKKTVRKFSDLIERNKDRRAYSDYKEGINEGLEIAKDTFEDNVEKFLSTSTDEDPQTKIRSLQDRFNLIIDTIVV
KEKPNYSQDHLDGIYEGFEKSKKIFENCIQEYYHSDSES
>Mature_119_residues
MKQKRIKKTVRKFSDLIERNKDRRAYSDYKEGINEGLEIAKDTFEDNVEKFLSTSTDEDPQTKIRSLQDRFNLIIDTIVV
KEKPNYSQDHLDGIYEGFEKSKKIFENCIQEYYHSDSES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14152; Mature: 14152

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKRIKKTVRKFSDLIERNKDRRAYSDYKEGINEGLEIAKDTFEDNVEKFLSTSTDEDP
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QTKIRSLQDRFNLIIDTIVVKEKPNYSQDHLDGIYEGFEKSKKIFENCIQEYYHSDSES
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQKRIKKTVRKFSDLIERNKDRRAYSDYKEGINEGLEIAKDTFEDNVEKFLSTSTDEDP
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
QTKIRSLQDRFNLIIDTIVVKEKPNYSQDHLDGIYEGFEKSKKIFENCIQEYYHSDSES
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA