Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is mhpC [H]
Identifier: 21226631
GI number: 21226631
Start: 656505
End: 657317
Strand: Reverse
Name: mhpC [H]
Synonym: MM_0529
Alternate gene names: 21226631
Gene position: 657317-656505 (Counterclockwise)
Preceding gene: 21226632
Following gene: 21226630
Centisome position: 16.05
GC content: 48.09
Gene sequence:
>813_bases ATGACCACCGGGTACGCAGACTCTGGAGACGGAAAGCTTTACTATGAAATCGAGGGAAAGGGCGAGGTTCTTGTGCTCAT CCATGCCGGGTTTGTTGACAGTGGCATGTGGGAAGAGCAGTGGGAGTCTTTTACCCGAAATTACAGGGTTCTTCGCTTTG ATATGCGCGGGTTTGGAAAATCCGATCCTGTAACAGGACCCGTTTCCCACCGACATGACCTGTACCACCTGCTTCAGGGC CTGGGAATTAAACATGCACATTTACTGGGCTGTTCCATGGGCGGAGAAACAGTTATTGATTTTACGCTCGAACACCCTGA AATGGTTCTGTCTCTAACCGTTGTAAGCGGGATTCCGGGAAGTTTTGAAATGACAGGGGAGCCCCCATCTGAGATTCTGG AGATGCTTCAAGCTCTCGAAAAGGGGGATCTGGACCTTGTGAGTGACCTGCAAATCCGCCTCTGGGTTGATGGCACTTTC CGGCAGCCTGAACAGGTCAGCCCTTCAGTTCGTAAGCATGCAGCTGAAATGAACAGGGTTGCGGTTAAAAACGGCACATG GGCAATTGCCGATGCCAGCCCTCTTAACCCGCTCAGTCCACCGGCTGCCGGGAGGCTGGATGAGATAAAAGTTCCTGTGC TTATTATTGTCGGGTCTCTTGATAATCCTGAAATCCTCAGGGCTGCTGATCTGCTTGAAAATAAAATCGAAAATGCAAAA AAAGTTATAATGCCAGATTGTGCTCATGTGCCAAATATGGAAAAACCTGAAGAATTCAACCGGAATGTACTTAATTTTCT TAGAAATTTATAA
Upstream 100 bases:
>100_bases CCGGAAAGCATATGCAAAGTTCAGGAAGGAAAAAGGCAGGGACTGAACAGGCACTAATCAGGAAGATGATCGGGCTTAAT TACACAGGAGACAACAGGAA
Downstream 100 bases:
>100_bases GGTCATAAAACACAGAGATTTATAATAGAAAGCGGTGGATTTCTCCAGATCAACATTTTTTTAATACTTTTACAATACTT CTATATTATTTTTATAATTT
Product: hydrolase
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTGYADSGDGKLYYEIEGKGEVLVLIHAGFVDSGMWEEQWESFTRNYRVLRFDMRGFGKSDPVTGPVSHRHDLYHLLQG LGIKHAHLLGCSMGGETVIDFTLEHPEMVLSLTVVSGIPGSFEMTGEPPSEILEMLQALEKGDLDLVSDLQIRLWVDGTF RQPEQVSPSVRKHAAEMNRVAVKNGTWAIADASPLNPLSPPAAGRLDEIKVPVLIIVGSLDNPEILRAADLLENKIENAK KVIMPDCAHVPNMEKPEEFNRNVLNFLRNL
Sequences:
>Translated_270_residues MTTGYADSGDGKLYYEIEGKGEVLVLIHAGFVDSGMWEEQWESFTRNYRVLRFDMRGFGKSDPVTGPVSHRHDLYHLLQG LGIKHAHLLGCSMGGETVIDFTLEHPEMVLSLTVVSGIPGSFEMTGEPPSEILEMLQALEKGDLDLVSDLQIRLWVDGTF RQPEQVSPSVRKHAAEMNRVAVKNGTWAIADASPLNPLSPPAAGRLDEIKVPVLIIVGSLDNPEILRAADLLENKIENAK KVIMPDCAHVPNMEKPEEFNRNVLNFLRNL >Mature_269_residues TTGYADSGDGKLYYEIEGKGEVLVLIHAGFVDSGMWEEQWESFTRNYRVLRFDMRGFGKSDPVTGPVSHRHDLYHLLQGL GIKHAHLLGCSMGGETVIDFTLEHPEMVLSLTVVSGIPGSFEMTGEPPSEILEMLQALEKGDLDLVSDLQIRLWVDGTFR QPEQVSPSVRKHAAEMNRVAVKNGTWAIADASPLNPLSPPAAGRLDEIKVPVLIIVGSLDNPEILRAADLLENKIENAKK VIMPDCAHVPNMEKPEEFNRNVLNFLRNL
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mhpC alpha/beta hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=275, Percent_Identity=30.5454545454545, Blast_Score=85, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 29952; Mature: 29820
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGYADSGDGKLYYEIEGKGEVLVLIHAGFVDSGMWEEQWESFTRNYRVLRFDMRGFGK CCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC SDPVTGPVSHRHDLYHLLQGLGIKHAHLLGCSMGGETVIDFTLEHPEMVLSLTVVSGIPG CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCC SFEMTGEPPSEILEMLQALEKGDLDLVSDLQIRLWVDGTFRQPEQVSPSVRKHAAEMNRV CEEECCCCHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCCHHCCHHHHHHHHHHHHE AVKNGTWAIADASPLNPLSPPAAGRLDEIKVPVLIIVGSLDNPEILRAADLLENKIENAK EEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH KVIMPDCAHVPNMEKPEEFNRNVLNFLRNL EEECCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TTGYADSGDGKLYYEIEGKGEVLVLIHAGFVDSGMWEEQWESFTRNYRVLRFDMRGFGK CCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCCC SDPVTGPVSHRHDLYHLLQGLGIKHAHLLGCSMGGETVIDFTLEHPEMVLSLTVVSGIPG CCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCC SFEMTGEPPSEILEMLQALEKGDLDLVSDLQIRLWVDGTFRQPEQVSPSVRKHAAEMNRV CEEECCCCHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCCCHHCCHHHHHHHHHHHHE AVKNGTWAIADASPLNPLSPPAAGRLDEIKVPVLIIVGSLDNPEILRAADLLENKIENAK EEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH KVIMPDCAHVPNMEKPEEFNRNVLNFLRNL EEECCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA