Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226610
Identifier: 21226610
GI number: 21226610
Start: 631617
End: 632309
Strand: Reverse
Name: 21226610
Synonym: MM_0508
Alternate gene names: NA
Gene position: 632309-631617 (Counterclockwise)
Preceding gene: 21226611
Following gene: 21226609
Centisome position: 15.44
GC content: 48.05
Gene sequence:
>693_bases TTGCAATTTTATATTATCATGAAATTCGATCTTCACGTACATTCCGAGCATTCAAAGGATAGCAATTCAAGCCACAGGGA CATTATTGAGGTTGCCCGCAGACGGGGGCTCGACGGGTTTGCTATCTGTGACCACGACACTGTGGAAGGCGGCCTCGCCT GCGCGGAAAAAGCCCTTGAACTCGGCCTTGAAATTACAGTACTCCCTGGGGTGGAAGTGAGTTCTTCAAAAGGGCATATT CTGGTTCTGGGAGTAAAGGAAAATATCGAGCCCCTGCTTAGCCCGGAAGAAACAATCCTGAAGGCAAGGAAACTTGGCGG CACAGTTATTATCCCCCACCCATTCAAACGCAGTTCCCACGGGATAGGAAGTTTCGAAGGGCTTGATATTGATGCGGTTG AGGTCTTCAATTCTCGCTGTCTTTTTAACTCGGCCAACAGGAAAGCCCTGGAAGAAGCAAAAAGGCTCGGAATACCCGGA GTGGCCGGGAGTGATTCCCATATTCCCGAGATGGTGGGGCAGGCATATACTGAAATCGACGCTGAAGAGAATACGGTTGA AGCAGTACTGAAGGCTATCAGGGAAGGGAAAGTCGCCCCTGCAGGGAAAAACACTCCAACTTCAATTATCCTTGAACAGA TGTCAGGAAGCGCAAAAAGGAAAATAAAGAGAAAGTTATTCGGAAAATCTTAA
Upstream 100 bases:
>100_bases ATTATTTTACCACTTTTTTCCTGTTCTATTATAAGCAGGAGATTTTACATACGTCTGGTTTCTTTTTTCTTTTCCCCTTC AAAATTTATATAAATTCTAC
Downstream 100 bases:
>100_bases AAAACGACTGGAACTATTAATTTTTTAGATAGTATTAACTGTTCTAATATTGCTTGATTTTCCTTTATTTTTACCCTTAT CTGTTTTTTCTAGATTTTTC
Product: isoleucyl-tRNA synthetase
Products: AMP; diphosphate; L-isoleucyl-tRNA(Ile)
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MQFYIIMKFDLHVHSEHSKDSNSSHRDIIEVARRRGLDGFAICDHDTVEGGLACAEKALELGLEITVLPGVEVSSSKGHI LVLGVKENIEPLLSPEETILKARKLGGTVIIPHPFKRSSHGIGSFEGLDIDAVEVFNSRCLFNSANRKALEEAKRLGIPG VAGSDSHIPEMVGQAYTEIDAEENTVEAVLKAIREGKVAPAGKNTPTSIILEQMSGSAKRKIKRKLFGKS
Sequences:
>Translated_230_residues MQFYIIMKFDLHVHSEHSKDSNSSHRDIIEVARRRGLDGFAICDHDTVEGGLACAEKALELGLEITVLPGVEVSSSKGHI LVLGVKENIEPLLSPEETILKARKLGGTVIIPHPFKRSSHGIGSFEGLDIDAVEVFNSRCLFNSANRKALEEAKRLGIPG VAGSDSHIPEMVGQAYTEIDAEENTVEAVLKAIREGKVAPAGKNTPTSIILEQMSGSAKRKIKRKLFGKS >Mature_230_residues MQFYIIMKFDLHVHSEHSKDSNSSHRDIIEVARRRGLDGFAICDHDTVEGGLACAEKALELGLEITVLPGVEVSSSKGHI LVLGVKENIEPLLSPEETILKARKLGGTVIIPHPFKRSSHGIGSFEGLDIDAVEVFNSRCLFNSANRKALEEAKRLGIPG VAGSDSHIPEMVGQAYTEIDAEENTVEAVLKAIREGKVAPAGKNTPTSIILEQMSGSAKRKIKRKLFGKS
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0417 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004013 - InterPro: IPR003141 - InterPro: IPR016195 [H]
Pfam domain/function: PF02811 PHP [H]
EC number: 6.1.1.5
Molecular weight: Translated: 24961; Mature: 24961
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFYIIMKFDLHVHSEHSKDSNSSHRDIIEVARRRGLDGFAICDHDTVEGGLACAEKALE CEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH LGLEITVLPGVEVSSSKGHILVLGVKENIEPLLSPEETILKARKLGGTVIIPHPFKRSSH CCCEEEEECCCEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCC GIGSFEGLDIDAVEVFNSRCLFNSANRKALEEAKRLGIPGVAGSDSHIPEMVGQAYTEID CCCCCCCCCCHHHHHHCCHHEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC AEENTVEAVLKAIREGKVAPAGKNTPTSIILEQMSGSAKRKIKRKLFGKS CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MQFYIIMKFDLHVHSEHSKDSNSSHRDIIEVARRRGLDGFAICDHDTVEGGLACAEKALE CEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH LGLEITVLPGVEVSSSKGHILVLGVKENIEPLLSPEETILKARKLGGTVIIPHPFKRSSH CCCEEEEECCCEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCC GIGSFEGLDIDAVEVFNSRCLFNSANRKALEEAKRLGIPGVAGSDSHIPEMVGQAYTEID CCCCCCCCCCHHHHHHCCHHEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC AEENTVEAVLKAIREGKVAPAGKNTPTSIILEQMSGSAKRKIKRKLFGKS CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-isoleucine; tRNA(Ile)
Specific reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]