The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226605

Identifier: 21226605

GI number: 21226605

Start: 624322

End: 625134

Strand: Direct

Name: 21226605

Synonym: MM_0503

Alternate gene names: NA

Gene position: 624322-625134 (Clockwise)

Preceding gene: 21226604

Following gene: 21226606

Centisome position: 15.24

GC content: 43.17

Gene sequence:

>813_bases
ATGAGCAGCGATGTATCATCGGAGAAGTCTCCTTTAACCTTCTTTGTATTAATTTTCGCTCTTTCAATTCCGTTTCTGTT
GTTTGGCGGAAGGCCACTGCCTCTCCCGATAAATCTTCCTGTGAGTTCTTTTATGTTAGTTTGCCCGCTCATAGCAGCTT
CGATACTTGTTTATAAAGAAAGCAAATTTGAAGGAATAAAGGAGCTATTGAAAAAGACTCTCAATTATAGAAAAATAAAT
CCAAAGATCTGGTACCTGCCTATCTTTTTGTTGATGCCAGCCATTATGCTGCTATCTTATCTGGTAATGCGTTTTATGGG
AAAGCCGCTTCCCGAGCCTCACATTCCTGTTCTGGCGATTCCTCTGTTTTTTGTCATGTTCTTTATTGCTGCTGTATTTG
AAGAAGCAGGCTGGATGGGATATGCAGCTGACCCCATGCAGCATCGCTGGGGTGCATCAGGAGCTGGAATTCTCATGGGG
TCGATATGGGGGATGTGGCATCTTGCGGGATGGCATTTTCAAACTCACCATACTGCGACATGGACTGCAGGACAATTTAT
CTCTACAGTAGCACTTCGAATCATTATTTTCTGGCTCTATAACAATACTGGAAAAAGTGTATTTGCAGCAGTTCTCTTTC
ACGACATGATGAATGTCAGCGAGTTTCTGTTTCCAAATTATGGTTCACATTATGACCCGGTTATTACCGGAGTGATCACT
GCAATTTTAGCTGCGGTAGTGACGTTCCTGTGGGGTCCCAGGACATTAGCCAGGTTCAGATATTCCGGGCAAAACATAAG
GCTGCCATACTAA

Upstream 100 bases:

>100_bases
ACTCTCCTCAAAGATGTTTAGACATATCTGAAGAGCAGAAAAAAAGAGCAGAAAAAACCATTTTCGACATGGGAGAAATA
AACATCAGGGGTCACAGGAC

Downstream 100 bases:

>100_bases
CATTAGCAGGGAAAATAAATAGCTATTTTATAACATAATGTTTATAAAAACATAGAGTAAAAACCAAGCCTGGAAAAATT
CTGCAGAATCTTAACAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease; CAAX Amino Terminal Protease Family Protein

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSSDVSSEKSPLTFFVLIFALSIPFLLFGGRPLPLPINLPVSSFMLVCPLIAASILVYKESKFEGIKELLKKTLNYRKIN
PKIWYLPIFLLMPAIMLLSYLVMRFMGKPLPEPHIPVLAIPLFFVMFFIAAVFEEAGWMGYAADPMQHRWGASGAGILMG
SIWGMWHLAGWHFQTHHTATWTAGQFISTVALRIIIFWLYNNTGKSVFAAVLFHDMMNVSEFLFPNYGSHYDPVITGVIT
AILAAVVTFLWGPRTLARFRYSGQNIRLPY

Sequences:

>Translated_270_residues
MSSDVSSEKSPLTFFVLIFALSIPFLLFGGRPLPLPINLPVSSFMLVCPLIAASILVYKESKFEGIKELLKKTLNYRKIN
PKIWYLPIFLLMPAIMLLSYLVMRFMGKPLPEPHIPVLAIPLFFVMFFIAAVFEEAGWMGYAADPMQHRWGASGAGILMG
SIWGMWHLAGWHFQTHHTATWTAGQFISTVALRIIIFWLYNNTGKSVFAAVLFHDMMNVSEFLFPNYGSHYDPVITGVIT
AILAAVVTFLWGPRTLARFRYSGQNIRLPY
>Mature_269_residues
SSDVSSEKSPLTFFVLIFALSIPFLLFGGRPLPLPINLPVSSFMLVCPLIAASILVYKESKFEGIKELLKKTLNYRKINP
KIWYLPIFLLMPAIMLLSYLVMRFMGKPLPEPHIPVLAIPLFFVMFFIAAVFEEAGWMGYAADPMQHRWGASGAGILMGS
IWGMWHLAGWHFQTHHTATWTAGQFISTVALRIIIFWLYNNTGKSVFAAVLFHDMMNVSEFLFPNYGSHYDPVITGVITA
ILAAVVTFLWGPRTLARFRYSGQNIRLPY

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30559; Mature: 30428

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDVSSEKSPLTFFVLIFALSIPFLLFGGRPLPLPINLPVSSFMLVCPLIAASILVYKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHH
SKFEGIKELLKKTLNYRKINPKIWYLPIFLLMPAIMLLSYLVMRFMGKPLPEPHIPVLAI
HHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
PLFFVMFFIAAVFEEAGWMGYAADPMQHRWGASGAGILMGSIWGMWHLAGWHFQTHHTAT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCC
WTAGQFISTVALRIIIFWLYNNTGKSVFAAVLFHDMMNVSEFLFPNYGSHYDPVITGVIT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AILAAVVTFLWGPRTLARFRYSGQNIRLPY
HHHHHHHHHHCCHHHHHHHHCCCCEEECCC
>Mature Secondary Structure 
SSDVSSEKSPLTFFVLIFALSIPFLLFGGRPLPLPINLPVSSFMLVCPLIAASILVYKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHH
SKFEGIKELLKKTLNYRKINPKIWYLPIFLLMPAIMLLSYLVMRFMGKPLPEPHIPVLAI
HHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
PLFFVMFFIAAVFEEAGWMGYAADPMQHRWGASGAGILMGSIWGMWHLAGWHFQTHHTAT
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCC
WTAGQFISTVALRIIIFWLYNNTGKSVFAAVLFHDMMNVSEFLFPNYGSHYDPVITGVIT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
AILAAVVTFLWGPRTLARFRYSGQNIRLPY
HHHHHHHHHHCCHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA