| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226584
Identifier: 21226584
GI number: 21226584
Start: 604961
End: 606067
Strand: Direct
Name: 21226584
Synonym: MM_0482
Alternate gene names: NA
Gene position: 604961-606067 (Clockwise)
Preceding gene: 21226583
Following gene: 21226585
Centisome position: 14.77
GC content: 40.38
Gene sequence:
>1107_bases ATGAAAAAGGAAAAAGCAGGGAGTGAAGGAGGGGAAGTTATGAATCATAAAACTGAGGATAAATCCGTTGGAGAGGAGGA AGGCTCGCTTTTCCTTTACCTTGCACCCGATACACCGGAAGCAAAGAAAATAAAAAGCTTGCAGGGAAAGGAATACGAGT ATGCCGGGTATATCGGAATGGTTGAGTATTCGATTGCCCGTTACTATTATGAAGTTGACAGAAAAATAACGGATAAAGAC GCAGTAGCAGCACTGAAGAATCTCAGGAAAAACTGCAGCAGACCCATTTCTTTTTTTAACCGTGGCCTTGAAAAAGAGAT TATTAAAAGCCTTATAGAAGTCCTTGAAGAAAAGCCGATAATAGTCCACGAATTAAACCTGGTAATAGATTACGTTCTGG AAGTTATCAGTAACAGGTCCTGGATGGGAGACAAACAGGCATACATAAAATGGGTAGCCTATATAATGGACCTTTTCACA GAGGGAGAAAAGGAAGAATATGAAAAAGAAATAAAGAAGCTTGCCGCCGAAATTGGCCTCTCGGATAAGCACGCAGACCT TATGCTCATGAAAGGGGAAGAGGAAGATTATTTTGAATTTATAGAAGAATATGGGGAAGAATATAGGGAAGAATACGAGG ATATAGAAGGGCTCCGGGGAGAAGATGCAGGAGAAAGGCAAAAAAGGGAAGTAAAAAGAGAAAAACAGGCTGGAGAAAGG TTAAAAGAAAAGGAATTAAGCGATGAAGAGCTGGTGGCGGAAATGGAGGACAAATTCCGCCTGATGGAAGATGAAGAGAA GTTCGATTTCCTGCTGGAAAACGGCCCGGAATTTTATGAATTTGCAGGAATTTACATATCAGAGCTGGCAGAAAAAAGGA AATATGACAGGATACAGGAGCTTTACAGCAAACTCACAGAGAAATATGATAACTTCCTCTACCTGTATGTGATTATGGGA GCAACCTACCTTGAAATAGACCCTGACCTTGCAAAGTTCTATTTTGAACAGGCACTGAAAACCCTTGATAAGCTGGATGA ATTTTCGGACGCGACAAAAGAAAAATTAAGAGCCAGCTTCGTTTCTTTTATAGAGAAAATAAGTTGA
Upstream 100 bases:
>100_bases AAAAGGAAAAGAAGAGGAAAAAGAAAAGGGGAGAGTTAAAAAGGGGAGATGAAAAAGGAAAAGAAGAGGAAAAAGAAAAG GGGAGAGTTAAAAAGGGGAG
Downstream 100 bases:
>100_bases GTCCACGCCTGAAAAATTCCTGGATTTTTTATGTAAACTCAGCTTGCCTGGTGAAAGTTTAGTTTTCGTTTATTCACTCT TTTTCATTTTCATTCTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKKEKAGSEGGEVMNHKTEDKSVGEEEGSLFLYLAPDTPEAKKIKSLQGKEYEYAGYIGMVEYSIARYYYEVDRKITDKD AVAALKNLRKNCSRPISFFNRGLEKEIIKSLIEVLEEKPIIVHELNLVIDYVLEVISNRSWMGDKQAYIKWVAYIMDLFT EGEKEEYEKEIKKLAAEIGLSDKHADLMLMKGEEEDYFEFIEEYGEEYREEYEDIEGLRGEDAGERQKREVKREKQAGER LKEKELSDEELVAEMEDKFRLMEDEEKFDFLLENGPEFYEFAGIYISELAEKRKYDRIQELYSKLTEKYDNFLYLYVIMG ATYLEIDPDLAKFYFEQALKTLDKLDEFSDATKEKLRASFVSFIEKIS
Sequences:
>Translated_368_residues MKKEKAGSEGGEVMNHKTEDKSVGEEEGSLFLYLAPDTPEAKKIKSLQGKEYEYAGYIGMVEYSIARYYYEVDRKITDKD AVAALKNLRKNCSRPISFFNRGLEKEIIKSLIEVLEEKPIIVHELNLVIDYVLEVISNRSWMGDKQAYIKWVAYIMDLFT EGEKEEYEKEIKKLAAEIGLSDKHADLMLMKGEEEDYFEFIEEYGEEYREEYEDIEGLRGEDAGERQKREVKREKQAGER LKEKELSDEELVAEMEDKFRLMEDEEKFDFLLENGPEFYEFAGIYISELAEKRKYDRIQELYSKLTEKYDNFLYLYVIMG ATYLEIDPDLAKFYFEQALKTLDKLDEFSDATKEKLRASFVSFIEKIS >Mature_368_residues MKKEKAGSEGGEVMNHKTEDKSVGEEEGSLFLYLAPDTPEAKKIKSLQGKEYEYAGYIGMVEYSIARYYYEVDRKITDKD AVAALKNLRKNCSRPISFFNRGLEKEIIKSLIEVLEEKPIIVHELNLVIDYVLEVISNRSWMGDKQAYIKWVAYIMDLFT EGEKEEYEKEIKKLAAEIGLSDKHADLMLMKGEEEDYFEFIEEYGEEYREEYEDIEGLRGEDAGERQKREVKREKQAGER LKEKELSDEELVAEMEDKFRLMEDEEKFDFLLENGPEFYEFAGIYISELAEKRKYDRIQELYSKLTEKYDNFLYLYVIMG ATYLEIDPDLAKFYFEQALKTLDKLDEFSDATKEKLRASFVSFIEKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43328; Mature: 43328
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEKAGSEGGEVMNHKTEDKSVGEEEGSLFLYLAPDTPEAKKIKSLQGKEYEYAGYIGM CCCCCCCCCCCHHHCCCCCHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEHHHHHHH VEYSIARYYYEVDRKITDKDAVAALKNLRKNCSRPISFFNRGLEKEIIKSLIEVLEEKPI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCC IVHELNLVIDYVLEVISNRSWMGDKQAYIKWVAYIMDLFTEGEKEEYEKEIKKLAAEIGL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC SDKHADLMLMKGEEEDYFEFIEEYGEEYREEYEDIEGLRGEDAGERQKREVKREKQAGER CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LKEKELSDEELVAEMEDKFRLMEDEEKFDFLLENGPEFYEFAGIYISELAEKRKYDRIQE HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LYSKLTEKYDNFLYLYVIMGATYLEIDPDLAKFYFEQALKTLDKLDEFSDATKEKLRASF HHHHHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFIEKIS HHHHHHCC >Mature Secondary Structure MKKEKAGSEGGEVMNHKTEDKSVGEEEGSLFLYLAPDTPEAKKIKSLQGKEYEYAGYIGM CCCCCCCCCCCHHHCCCCCHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEHHHHHHH VEYSIARYYYEVDRKITDKDAVAALKNLRKNCSRPISFFNRGLEKEIIKSLIEVLEEKPI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCC IVHELNLVIDYVLEVISNRSWMGDKQAYIKWVAYIMDLFTEGEKEEYEKEIKKLAAEIGL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC SDKHADLMLMKGEEEDYFEFIEEYGEEYREEYEDIEGLRGEDAGERQKREVKREKQAGER CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LKEKELSDEELVAEMEDKFRLMEDEEKFDFLLENGPEFYEFAGIYISELAEKRKYDRIQE HHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LYSKLTEKYDNFLYLYVIMGATYLEIDPDLAKFYFEQALKTLDKLDEFSDATKEKLRASF HHHHHHHHHHHHHHHHHHHCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFIEKIS HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA