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The map label for this gene is 21226562

Identifier: 21226562

GI number: 21226562

Start: 580792

End: 581625

Strand: Direct

Name: 21226562

Synonym: MM_0460

Alternate gene names: NA

Gene position: 580792-581625 (Clockwise)

Preceding gene: 21226561

Following gene: 21226571

Centisome position: 14.18

GC content: 47.12

Gene sequence:

>834_bases
ATGTTACCTGAAAAACTTATTTTTGGGACTGCAGGAGTTCCCAGAAGCACGAAAGCCAGCAACAGCGTTGCAGGAATAGC
TAGGGTCAGAGAACTGGGGCTTGACTGCATGGAACTTGAGTTCGTGCAGGGAGTCCGTATGAGTGAAAAAGTGGCAGTAA
ACGTCCTGGAAGCAGCCAGAAGAGAAAATATAGCCCTGAGCGTACATGCACCTTACTACATCAACCTGAACTCTTCTGAA
GAAGAAAAATTAAAAGCCAGCATGGAAAGGATATATCAGGCTGCAAGGATAGGCAGCCTCTGTGGAGCAGAGTCGATAGT
GCTGCACGCAGCCTTTTACCAGAAGAGCAGCAGGGAAGCCGCTTATCAGAACGTCTCAAAAGCCCTCAGTGAGCTTGCAG
GACGGCTCCGGGGTGAAAGCATAGATGCAGTCCTTCGCCCTGAGACCATGGGCAAACGTGCTCAGTTCGGAACCCTTGAT
GAGGTGCTTTCTTTAAGCGAAGAGATCGAAGGGGTCATGCCCTGCCTTGACTTTTCCCATCTGCACGCAAGGGAAGGAAA
GGAAAACTCCTATCCCGAATTTACGTCAATCCTCTCGAAAGTGGAGGACGCCCTTGGAAAAGAAGGGCTTGCAAACATGC
ATATGCACGTATCAGGAATAGAATACGACAGAAACGGAGAAAAAAAGCACCTGACCCTTAAAGAATCCGATTTTAACTAT
CCCGAACTTATGAAAGCCCTTAAAGAATTTGAAGTTAAAGGGCTTGTTATCTGCGAAAGCCCAATAATGGAAGAAGATGC
ACTTCTTCTGAAAAGGACTTACGCGGAATTATAA

Upstream 100 bases:

>100_bases
GATAAAATAGCTGAAGATAGAAAAATAGTGTAAACAAAAACAGCTGAAAGACAGATTTTCAAAAAGCCCAACTAAAAGCA
CCCTGAAAAAATGCATTAAC

Downstream 100 bases:

>100_bases
TCCAGGAGTTCTTACTAAAAACAGGCTGAGAATGTCGTTTTAAGGATTAATCTCAAATTCCTTTCTGAAGATTAATCTTA
CAATTTTTTAAGGCGTACAC

Product: putative endonuclease IV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLPEKLIFGTAGVPRSTKASNSVAGIARVRELGLDCMELEFVQGVRMSEKVAVNVLEAARRENIALSVHAPYYINLNSSE
EEKLKASMERIYQAARIGSLCGAESIVLHAAFYQKSSREAAYQNVSKALSELAGRLRGESIDAVLRPETMGKRAQFGTLD
EVLSLSEEIEGVMPCLDFSHLHAREGKENSYPEFTSILSKVEDALGKEGLANMHMHVSGIEYDRNGEKKHLTLKESDFNY
PELMKALKEFEVKGLVICESPIMEEDALLLKRTYAEL

Sequences:

>Translated_277_residues
MLPEKLIFGTAGVPRSTKASNSVAGIARVRELGLDCMELEFVQGVRMSEKVAVNVLEAARRENIALSVHAPYYINLNSSE
EEKLKASMERIYQAARIGSLCGAESIVLHAAFYQKSSREAAYQNVSKALSELAGRLRGESIDAVLRPETMGKRAQFGTLD
EVLSLSEEIEGVMPCLDFSHLHAREGKENSYPEFTSILSKVEDALGKEGLANMHMHVSGIEYDRNGEKKHLTLKESDFNY
PELMKALKEFEVKGLVICESPIMEEDALLLKRTYAEL
>Mature_277_residues
MLPEKLIFGTAGVPRSTKASNSVAGIARVRELGLDCMELEFVQGVRMSEKVAVNVLEAARRENIALSVHAPYYINLNSSE
EEKLKASMERIYQAARIGSLCGAESIVLHAAFYQKSSREAAYQNVSKALSELAGRLRGESIDAVLRPETMGKRAQFGTLD
EVLSLSEEIEGVMPCLDFSHLHAREGKENSYPEFTSILSKVEDALGKEGLANMHMHVSGIEYDRNGEKKHLTLKESDFNY
PELMKALKEFEVKGLVICESPIMEEDALLLKRTYAEL

Specific function: Unknown

COG id: COG0648

COG function: function code L; Endonuclease IV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001719
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: 3.1.21.2

Molecular weight: Translated: 30774; Mature: 30774

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPEKLIFGTAGVPRSTKASNSVAGIARVRELGLDCMELEFVQGVRMSEKVAVNVLEAAR
CCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH
RENIALSVHAPYYINLNSSEEEKLKASMERIYQAARIGSLCGAESIVLHAAFYQKSSREA
HCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AYQNVSKALSELAGRLRGESIDAVLRPETMGKRAQFGTLDEVLSLSEEIEGVMPCLDFSH
HHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH
LHAREGKENSYPEFTSILSKVEDALGKEGLANMHMHVSGIEYDRNGEKKHLTLKESDFNY
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCCCEEEEEECCCCCH
PELMKALKEFEVKGLVICESPIMEEDALLLKRTYAEL
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLPEKLIFGTAGVPRSTKASNSVAGIARVRELGLDCMELEFVQGVRMSEKVAVNVLEAAR
CCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH
RENIALSVHAPYYINLNSSEEEKLKASMERIYQAARIGSLCGAESIVLHAAFYQKSSREA
HCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AYQNVSKALSELAGRLRGESIDAVLRPETMGKRAQFGTLDEVLSLSEEIEGVMPCLDFSH
HHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHH
LHAREGKENSYPEFTSILSKVEDALGKEGLANMHMHVSGIEYDRNGEKKHLTLKESDFNY
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECEEECCCCCCEEEEEECCCCCH
PELMKALKEFEVKGLVICESPIMEEDALLLKRTYAEL
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]