| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is coaD
Identifier: 21226560
GI number: 21226560
Start: 579716
End: 580180
Strand: Direct
Name: coaD
Synonym: MM_0458
Alternate gene names: 21226560
Gene position: 579716-580180 (Clockwise)
Preceding gene: 21226557
Following gene: 21226561
Centisome position: 14.15
GC content: 44.52
Gene sequence:
>465_bases ATGCCAAAGGTCGCCGTAGGCGGTACGTTTCAGTATCTTCATGACGGACACGCCAGATTAATTGAAAAAGCGTTTGAGAT AGCAGGCAGTGGAAAAGTCTACATAGGGCTTACTTCGGACGAGATGCTGCAAAAAAACCACAGCGTCGAGAGCTATAAAA TCCGAAGGTCACGCCTGCTTGAGTATATAAAAAAAATGGGGGTTCCGGAAGAGAAATACGAAGTTACAAGGCTGAACGAT CCCTGCGGCCCAACTATTGAAGAGGACTTCGACCACATAATTGTCTCCCCTGAGACCTATCCGGTTGCCCTGAAAATTAA CACTATAAGGGAGAAAAAAGGAAAGAAACCTCTGGAAATTGTATATGTTGAGTACGTGATGGCTGAAGACGGGATACCGA TTTCTTCTACCAGGATTTCAAAAGGAGAAATAGACAGGCACGGCAGGTTAAAAAAAGAAGCTTGA
Upstream 100 bases:
>100_bases TTGTAAAAGAAAAGAGGAAAAGAGAGAAAAAAATATAGAAAGCCTTCAAAAAACCGAGAAAAACCAAAACTTCTTTTTAC TTAGCAGATTATCACCAATC
Downstream 100 bases:
>100_bases AAAAAAGGTTTGAAATCCTGAACTCCTTTTTTTGTAAATTCTCCCTGCAACAGATATAATCGGGCATCAGATATAATCGG ACAACAGATATAACCGGCCT
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPKVAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKIRRSRLLEYIKKMGVPEEKYEVTRLND PCGPTIEEDFDHIIVSPETYPVALKINTIREKKGKKPLEIVYVEYVMAEDGIPISSTRISKGEIDRHGRLKKEA
Sequences:
>Translated_154_residues MPKVAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKIRRSRLLEYIKKMGVPEEKYEVTRLND PCGPTIEEDFDHIIVSPETYPVALKINTIREKKGKKPLEIVYVEYVMAEDGIPISSTRISKGEIDRHGRLKKEA >Mature_153_residues PKVAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKIRRSRLLEYIKKMGVPEEKYEVTRLNDP CGPTIEEDFDHIIVSPETYPVALKINTIREKKGKKPLEIVYVEYVMAEDGIPISSTRISKGEIDRHGRLKKEA
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG1019
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eukaryotic CoaD family
Homologues:
Organism=Caenorhabditis elegans, GI25143409, Length=141, Percent_Identity=31.9148936170213, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321716, Length=149, Percent_Identity=35.5704697986577, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_METMA (Q8PZN4)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632482.1 - ProteinModelPortal: Q8PZN4 - SMR: Q8PZN4 - GeneID: 1478800 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0458 - NMPDR: fig|192952.1.peg.458 - HOGENOM: HBG593121 - OMA: ISTTRIR - ProtClustDB: PRK00777 - BioCyc: MMAZ192952:MM0458-MONOMER - BRENDA: 2.7.7.3 - GO: GO:0005737 - HAMAP: MF_00647 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17504; Mature: 17373
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKIRRSRLL CCCEECCCCHHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHH EYIKKMGVPEEKYEVTRLNDPCGPTIEEDFDHIIVSPETYPVALKINTIREKKGKKPLEI HHHHHCCCCHHHEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEHHHCCCCCEEE VYVEYVMAEDGIPISSTRISKGEIDRHGRLKKEA EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKVAVGGTFQYLHDGHARLIEKAFEIAGSGKVYIGLTSDEMLQKNHSVESYKIRRSRLL CCEECCCCHHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHH EYIKKMGVPEEKYEVTRLNDPCGPTIEEDFDHIIVSPETYPVALKINTIREKKGKKPLEI HHHHHCCCCHHHEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEHHHCCCCCEEE VYVEYVMAEDGIPISSTRISKGEIDRHGRLKKEA EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824