| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is cdcH [H]
Identifier: 21226549
GI number: 21226549
Start: 568898
End: 571276
Strand: Direct
Name: cdcH [H]
Synonym: MM_0447
Alternate gene names: 21226549
Gene position: 568898-571276 (Clockwise)
Preceding gene: 21226547
Following gene: 21226550
Centisome position: 13.89
GC content: 49.64
Gene sequence:
>2379_bases ATGGAAGAAATACAGTTGAAGGTTGAAAAGGCATATCCTATTGACCTTGGAAGAGGAATTATCCGGCTTGACCCTACAGC TCTGCTGAAACTTCAGCTCTCTCCCGGTGACATTGTGGAGATAAGGGGGAAGAAAAAGACCACTGCAAAGGTATGGAGAG CGGACCGGCAGGACTGGGAACAGGGAATTGTGCGCATTGATAATTTCATCCGGCAAAATGCCGGGGTCTCCATAGGGGAG AAGGTGACAATTAAAAAGGTTGAAGCCCCGGAAGCAAAAAAATTGATCCTGGCGCTTCCGGAAAGCATGACACAGGGAGG GCCCGAACTTCAGTTTGGAGAACATGCAAATGAGATCATAAAACGGCATATCCTGAAAAGACCTGTGTTCAAGGGGGACA TAATTCCAATAATAAATTCAATGTCTCAGCCAATGACAGAGTCCCTGACAACAAGCCAGGTAATCCCCCTGGTTGCTGTC GAGACTGACCCTGCAAATACAATTGTCCTGATTACCGAAACAACAAACATTGAACTCCGGAAAAAACCGGTACAGGGCTA CGAAAAGGCAACAAGAGGCGTCACCACCTATGAAGATATAGGGGGCCTGGGTGACGAGATCATGCGTGTCCGTGAAATGA TAGAGATGCCCATGAAGCACCCTGAACTTTTTGCCCACCTTAACATTGAGCCTCCGAAAGGAGTCATCCTCTACGGCCCA CCGGGAACCGGAAAGACCCTGATTGCAAAAGCCGTGGCAAACGAGTCCGGAGCAAGTTTCCATTACATTGCCGGGCCCGA GATTGTAGGAAAGTTCTATGGGGAAAGTGAAGAAAGGCTGAGGAAGATCTTCGAGGAGGCTACCCAGGAAGCCCCTTCAG TCATCTTCATCGATGAAATCGACTCCATTGCCCCCAAGAGGGAAAACGTGACAGGGGAAGTGGAAAGGCGTGTGGTTGCC CAGCTCCTGACCCTGCTTGACGGGATGGAGGAAAGAGGACAGGTTGTGGTTATAGGGGCTACCAACCGTGTGGACGCAAT AGACCCAGCACTCAGGAGACCTGGCCGCTTTGACAGGGAAATCCATATAGGAGTGCCGGATACCAAAGACAGGTATGAGA TTCTGCAGATCCATACAAGGGGCATGCCGATTGAAAAAGATGAAGAGTCCGTGACAGGTGAGCCTGCGCCGGAAGTCGAA ATTGGAGCCCTGGATGAATTCGAGGTTGAAACAGGGACTGAGATAGAAGTCGATGAAGCTGCCATGGAGAGGGAAAAGAA AGAGAAGACAAACCTGTATCTCATGTCCCTGGCTGAGAGGACGCAGGGATTTGTGGGTGCGGACCTTCTGGCTCTTGTGC AGGAAGCAGCAATGAGGTGCCTAAGGGAAAACCTGCCTGACCTCGACCTGGAAATTGACACAATCCCACCTGAAAGGCTG GAGAAGATTGTTGTAACCAAAAAGAACTTCGAAGATGCACTGATGGAAGCCGAGCCTTCAGCCCTGAGAGAGATCTTTGT TGAGATGCCTTCTGTCAGCTGGGGCGATGTTGGAGGTCTTGATGAAGCAAAGCATTCTATCATCGAAGCTGTTGAGTGGC CTATTAAAAACCCGGAAAAGTTTGTCAAGATGGGAATAAAAGCTCCTAAAGGAATCCTGCTTTACGGACCTCCGGGAACA GGAAAGACCCTGATAGCCCAGGCTGTTGCAAAAGAGTCAAATGCCAATTTCATAAGCGTTAAAGGGCCGGAGATGTTTTC AAAGTGGCTTGGAGAATCGGAAAAAGCAATTCGTGAAACCTTCAAGAAAGCGAGGCAGGTCTCTCCCTGTGTTGTCTTCT TTGATGAGATCGACTCTATTGCCGGTATGCAGGGTATGGAATCCACGGACAGCCGGACTTCTGAAAGGGTACTCAACCAG CTGCTCACCGAAATGGACGGGCTTGAGACACTCAAGGATGTGGTAATTATTGCCGCAACTAACCGCCCTAACCTGCTTGA CCCCGCAATCCTGCGTCCTGGCCGCTTTGACAGGCTTGTTTATGTGGGGGCGCCGGACAGGAAAGGCAGGCTGAGGATCT TCAAAATCCATACGCAGAATACACCTCTTGCAGAGGACGTGAACCTTGAGAACCTTGCCGATACGACAGAAGGATATGTG GGTGCGGATATAGAAGCGGTATGCAGAGAGGCTGTAATGTTTGCTCTCAGAGAAAACTTCGATATTGAAGCGATTGAGAT GAGGCACTTCAGAGAAGCCCTTAAGAAAGTTAAGCCCACAATTAACGAGAACATTGCCCAGTTCTATGAGAAGATAGAGG AGCAGTTTAAAGGAGGCCAGAGACCGGTCGAGACAGCCGGATTGGTGGGATACAGGTAA
Upstream 100 bases:
>100_bases GTATTCGATCCGGAAAATTCGGAAAAAACGGCATCCTTTCATTTTATACCATTACCAGATAGAATAATAATCAAAAAGAC AACTATTTTCGGGATGATCC
Downstream 100 bases:
>100_bases AAATTTAAATTAGTAACTCTTAAAAAGGAAGAGTTTATAAAGTATACGGATTCAAACTGAATAAATGTAAAAAGTAAATG TATTTAAACTGAAAAGCCGG
Product: cell division control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWEQGIVRIDNFIRQNAGVSIGE KVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEIIKRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAV ETDPANTIVLITETTNIELRKKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEIDSIAPKRENVTGEVERRVVA QLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEILQIHTRGMPIEKDEESVTGEPAPEVE IGALDEFEVETGTEIEVDEAAMEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEIDTIPPERL EKIVVTKKNFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEKFVKMGIKAPKGILLYGPPGT GKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRETFKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSERVLNQ LLTEMDGLETLKDVVIIAATNRPNLLDPAILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYV GADIEAVCREAVMFALRENFDIEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRPVETAGLVGYR
Sequences:
>Translated_792_residues MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWEQGIVRIDNFIRQNAGVSIGE KVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEIIKRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAV ETDPANTIVLITETTNIELRKKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEIDSIAPKRENVTGEVERRVVA QLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEILQIHTRGMPIEKDEESVTGEPAPEVE IGALDEFEVETGTEIEVDEAAMEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEIDTIPPERL EKIVVTKKNFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEKFVKMGIKAPKGILLYGPPGT GKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRETFKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSERVLNQ LLTEMDGLETLKDVVIIAATNRPNLLDPAILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYV GADIEAVCREAVMFALRENFDIEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRPVETAGLVGYR >Mature_792_residues MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWEQGIVRIDNFIRQNAGVSIGE KVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEIIKRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAV ETDPANTIVLITETTNIELRKKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEIDSIAPKRENVTGEVERRVVA QLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDREIHIGVPDTKDRYEILQIHTRGMPIEKDEESVTGEPAPEVE IGALDEFEVETGTEIEVDEAAMEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEIDTIPPERL EKIVVTKKNFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEKFVKMGIKAPKGILLYGPPGT GKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRETFKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSERVLNQ LLTEMDGLETLKDVVIIAATNRPNLLDPAILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYV GADIEAVCREAVMFALRENFDIEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRPVETAGLVGYR
Specific function: May be part of a transduction pathway connecting light to cell division [H]
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]
Homologues:
Organism=Homo sapiens, GI6005942, Length=791, Percent_Identity=40.834386852086, Blast_Score=591, Evalue=1e-169, Organism=Homo sapiens, GI157671927, Length=619, Percent_Identity=46.6882067851373, Blast_Score=565, Evalue=1e-161, Organism=Homo sapiens, GI45643123, Length=638, Percent_Identity=40.4388714733542, Blast_Score=463, Evalue=1e-130, Organism=Homo sapiens, GI45643125, Length=638, Percent_Identity=40.4388714733542, Blast_Score=463, Evalue=1e-130, Organism=Homo sapiens, GI229577436, Length=792, Percent_Identity=34.8484848484849, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI4505725, Length=520, Percent_Identity=33.6538461538462, Blast_Score=281, Evalue=2e-75, Organism=Homo sapiens, GI194018488, Length=570, Percent_Identity=31.7543859649123, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI195539395, Length=248, Percent_Identity=45.1612903225806, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI24497618, Length=319, Percent_Identity=38.2445141065831, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI153792536, Length=327, Percent_Identity=36.697247706422, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI300192933, Length=253, Percent_Identity=45.8498023715415, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI24430151, Length=266, Percent_Identity=44.3609022556391, Blast_Score=220, Evalue=5e-57, Organism=Homo sapiens, GI4506209, Length=251, Percent_Identity=43.8247011952191, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI24497435, Length=233, Percent_Identity=44.206008583691, Blast_Score=212, Evalue=1e-54, Organism=Homo sapiens, GI21361144, Length=265, Percent_Identity=38.8679245283019, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI5729991, Length=263, Percent_Identity=40.6844106463878, Blast_Score=207, Evalue=4e-53, Organism=Homo sapiens, GI24430155, Length=263, Percent_Identity=40.6844106463878, Blast_Score=206, Evalue=6e-53, Organism=Homo sapiens, GI89064750, Length=263, Percent_Identity=40.6844106463878, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI4507173, Length=253, Percent_Identity=40.7114624505929, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI226371754, Length=364, Percent_Identity=34.3406593406593, Blast_Score=186, Evalue=6e-47, Organism=Homo sapiens, GI7019569, Length=256, Percent_Identity=40.234375, Blast_Score=186, Evalue=7e-47, Organism=Homo sapiens, GI5901990, Length=292, Percent_Identity=40.0684931506849, Blast_Score=186, Evalue=7e-47, Organism=Homo sapiens, GI7657689, Length=229, Percent_Identity=44.1048034934498, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI21327685, Length=229, Percent_Identity=44.1048034934498, Blast_Score=184, Evalue=3e-46, Organism=Homo sapiens, GI14149767, Length=297, Percent_Identity=38.047138047138, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI62177112, Length=297, Percent_Identity=38.047138047138, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI17865802, Length=240, Percent_Identity=40.8333333333333, Blast_Score=177, Evalue=4e-44, Organism=Homo sapiens, GI31742536, Length=307, Percent_Identity=33.2247557003257, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI112789543, Length=307, Percent_Identity=33.2247557003257, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI40806170, Length=304, Percent_Identity=36.1842105263158, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI11875211, Length=304, Percent_Identity=36.1842105263158, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI156564401, Length=237, Percent_Identity=39.662447257384, Blast_Score=164, Evalue=4e-40, Organism=Homo sapiens, GI310125280, Length=238, Percent_Identity=39.0756302521008, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI310125282, Length=237, Percent_Identity=39.2405063291139, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI31377644, Length=232, Percent_Identity=37.5, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI64084766, Length=292, Percent_Identity=32.8767123287671, Blast_Score=141, Evalue=3e-33, Organism=Homo sapiens, GI40806173, Length=141, Percent_Identity=45.3900709219858, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI116292174, Length=268, Percent_Identity=25.3731343283582, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI11321607, Length=171, Percent_Identity=30.4093567251462, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4757852, Length=205, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI119964730, Length=205, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI75677353, Length=150, Percent_Identity=30, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI1789568, Length=250, Percent_Identity=43.6, Blast_Score=217, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17532375, Length=791, Percent_Identity=39.9494310998736, Blast_Score=576, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17531535, Length=791, Percent_Identity=39.4437420986094, Blast_Score=562, Evalue=1e-160, Organism=Caenorhabditis elegans, GI17537217, Length=654, Percent_Identity=35.1681957186544, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17508053, Length=552, Percent_Identity=35.6884057971014, Blast_Score=307, Evalue=1e-83, Organism=Caenorhabditis elegans, GI71987372, Length=248, Percent_Identity=44.758064516129, Blast_Score=224, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71987364, Length=248, Percent_Identity=44.758064516129, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI193206116, Length=320, Percent_Identity=39.375, Blast_Score=219, Evalue=5e-57, Organism=Caenorhabditis elegans, GI133931034, Length=320, Percent_Identity=39.375, Blast_Score=219, Evalue=5e-57, Organism=Caenorhabditis elegans, GI193206114, Length=320, Percent_Identity=39.375, Blast_Score=219, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17554786, Length=233, Percent_Identity=45.4935622317597, Blast_Score=218, Evalue=1e-56, Organism=Caenorhabditis elegans, GI25144278, Length=233, Percent_Identity=45.0643776824034, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI25144281, Length=233, Percent_Identity=45.0643776824034, Blast_Score=214, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17563248, Length=255, Percent_Identity=43.5294117647059, Blast_Score=212, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17563250, Length=231, Percent_Identity=45.021645021645, Blast_Score=212, Evalue=8e-55, Organism=Caenorhabditis elegans, GI17508701, Length=254, Percent_Identity=39.3700787401575, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI25153574, Length=224, Percent_Identity=45.9821428571429, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71994521, Length=263, Percent_Identity=44.8669201520913, Blast_Score=206, Evalue=5e-53, Organism=Caenorhabditis elegans, GI193209502, Length=224, Percent_Identity=45.9821428571429, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17505546, Length=194, Percent_Identity=50.5154639175258, Blast_Score=199, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17554784, Length=233, Percent_Identity=43.7768240343348, Blast_Score=199, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17562804, Length=271, Percent_Identity=39.1143911439114, Blast_Score=182, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17554264, Length=240, Percent_Identity=39.5833333333333, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI86561515, Length=252, Percent_Identity=38.4920634920635, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI115534323, Length=233, Percent_Identity=42.4892703862661, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17560432, Length=306, Percent_Identity=34.640522875817, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI25146157, Length=282, Percent_Identity=35.4609929078014, Blast_Score=162, Evalue=9e-40, Organism=Caenorhabditis elegans, GI32563584, Length=261, Percent_Identity=37.1647509578544, Blast_Score=160, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17508421, Length=259, Percent_Identity=37.0656370656371, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI133901662, Length=229, Percent_Identity=38.8646288209607, Blast_Score=158, Evalue=1e-38, Organism=Caenorhabditis elegans, GI133901658, Length=234, Percent_Identity=38.4615384615385, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17541224, Length=221, Percent_Identity=34.3891402714932, Blast_Score=143, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17541226, Length=221, Percent_Identity=34.3891402714932, Blast_Score=143, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17533043, Length=256, Percent_Identity=27.34375, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17570397, Length=114, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32566590, Length=114, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71990294, Length=146, Percent_Identity=30.1369863013699, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320077, Length=806, Percent_Identity=41.1910669975186, Blast_Score=578, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6323429, Length=579, Percent_Identity=45.2504317789292, Blast_Score=505, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6322994, Length=668, Percent_Identity=35.9281437125749, Blast_Score=409, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6324000, Length=534, Percent_Identity=30.7116104868914, Blast_Score=236, Evalue=9e-63, Organism=Saccharomyces cerevisiae, GI6322651, Length=287, Percent_Identity=43.205574912892, Blast_Score=227, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6324833, Length=247, Percent_Identity=44.9392712550607, Blast_Score=221, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6321709, Length=315, Percent_Identity=38.7301587301587, Blast_Score=220, Evalue=8e-58, Organism=Saccharomyces cerevisiae, GI6321390, Length=245, Percent_Identity=43.265306122449, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6320197, Length=263, Percent_Identity=42.2053231939163, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322704, Length=261, Percent_Identity=41.3793103448276, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320854, Length=255, Percent_Identity=42.7450980392157, Blast_Score=206, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6323736, Length=250, Percent_Identity=44, Blast_Score=203, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6324691, Length=264, Percent_Identity=38.2575757575758, Blast_Score=202, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320602, Length=270, Percent_Identity=40, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6325281, Length=264, Percent_Identity=38.2575757575758, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6325431, Length=303, Percent_Identity=36.963696369637, Blast_Score=184, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6325183, Length=299, Percent_Identity=36.4548494983278, Blast_Score=180, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6320887, Length=321, Percent_Identity=35.202492211838, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319554, Length=240, Percent_Identity=41.6666666666667, Blast_Score=174, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6321465, Length=232, Percent_Identity=40.0862068965517, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI9755327, Length=179, Percent_Identity=30.7262569832402, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320583, Length=160, Percent_Identity=29.375, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17137560, Length=804, Percent_Identity=40.0497512437811, Blast_Score=574, Evalue=1e-164, Organism=Drosophila melanogaster, GI161076486, Length=804, Percent_Identity=40.0497512437811, Blast_Score=573, Evalue=1e-163, Organism=Drosophila melanogaster, GI161076488, Length=779, Percent_Identity=40.5648267008986, Blast_Score=570, Evalue=1e-163, Organism=Drosophila melanogaster, GI19921202, Length=676, Percent_Identity=34.3195266272189, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI281365776, Length=320, Percent_Identity=43.4375, Blast_Score=289, Evalue=5e-78, Organism=Drosophila melanogaster, GI45552965, Length=320, Percent_Identity=43.4375, Blast_Score=289, Evalue=5e-78, Organism=Drosophila melanogaster, GI24660075, Length=320, Percent_Identity=43.4375, Blast_Score=289, Evalue=5e-78, Organism=Drosophila melanogaster, GI24656825, Length=564, Percent_Identity=29.6099290780142, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24656820, Length=583, Percent_Identity=28.9879931389365, Blast_Score=250, Evalue=3e-66, Organism=Drosophila melanogaster, GI281363136, Length=517, Percent_Identity=32.495164410058, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI78707192, Length=517, Percent_Identity=32.495164410058, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI21355121, Length=575, Percent_Identity=28, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI24652279, Length=257, Percent_Identity=43.1906614785992, Blast_Score=227, Evalue=3e-59, Organism=Drosophila melanogaster, GI28574878, Length=249, Percent_Identity=45.3815261044177, Blast_Score=223, Evalue=5e-58, Organism=Drosophila melanogaster, GI24665814, Length=249, Percent_Identity=45.3815261044177, Blast_Score=223, Evalue=5e-58, Organism=Drosophila melanogaster, GI17137738, Length=251, Percent_Identity=44.2231075697211, Blast_Score=221, Evalue=2e-57, Organism=Drosophila melanogaster, GI24649446, Length=254, Percent_Identity=44.8818897637795, Blast_Score=220, Evalue=3e-57, Organism=Drosophila melanogaster, GI24640100, Length=247, Percent_Identity=43.3198380566802, Blast_Score=217, Evalue=3e-56, Organism=Drosophila melanogaster, GI19920408, Length=233, Percent_Identity=45.9227467811159, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI18860063, Length=233, Percent_Identity=44.6351931330472, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI24651451, Length=231, Percent_Identity=44.1558441558442, Blast_Score=213, Evalue=6e-55, Organism=Drosophila melanogaster, GI24663015, Length=248, Percent_Identity=41.9354838709677, Blast_Score=212, Evalue=8e-55, Organism=Drosophila melanogaster, GI17738151, Length=262, Percent_Identity=38.1679389312977, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI281361487, Length=233, Percent_Identity=43.7768240343348, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24658770, Length=248, Percent_Identity=43.5483870967742, Blast_Score=196, Evalue=8e-50, Organism=Drosophila melanogaster, GI18859657, Length=238, Percent_Identity=44.9579831932773, Blast_Score=189, Evalue=8e-48, Organism=Drosophila melanogaster, GI24639391, Length=232, Percent_Identity=42.6724137931034, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI24644145, Length=295, Percent_Identity=36.6101694915254, Blast_Score=177, Evalue=3e-44, Organism=Drosophila melanogaster, GI24581396, Length=272, Percent_Identity=35.2941176470588, Blast_Score=174, Evalue=3e-43, Organism=Drosophila melanogaster, GI281360142, Length=294, Percent_Identity=35.3741496598639, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI21357333, Length=294, Percent_Identity=35.3741496598639, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI281360146, Length=294, Percent_Identity=35.3741496598639, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI281360138, Length=294, Percent_Identity=35.3741496598639, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI281360144, Length=294, Percent_Identity=35.3741496598639, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI281360140, Length=294, Percent_Identity=35.3741496598639, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI281360136, Length=294, Percent_Identity=35.3741496598639, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI24644411, Length=294, Percent_Identity=35.3741496598639, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI28571849, Length=309, Percent_Identity=35.9223300970874, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI28571847, Length=309, Percent_Identity=35.9223300970874, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI20129529, Length=232, Percent_Identity=37.9310344827586, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI20129423, Length=233, Percent_Identity=37.7682403433476, Blast_Score=167, Evalue=3e-41, Organism=Drosophila melanogaster, GI17864540, Length=468, Percent_Identity=31.4102564102564, Blast_Score=163, Evalue=4e-40, Organism=Drosophila melanogaster, GI28573010, Length=284, Percent_Identity=35.2112676056338, Blast_Score=156, Evalue=5e-38, Organism=Drosophila melanogaster, GI45554047, Length=166, Percent_Identity=42.7710843373494, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI24639486, Length=241, Percent_Identity=36.0995850622407, Blast_Score=137, Evalue=4e-32, Organism=Drosophila melanogaster, GI28573181, Length=165, Percent_Identity=30.9090909090909, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI20129417, Length=153, Percent_Identity=30.0653594771242, Blast_Score=70, Evalue=8e-12, Organism=Drosophila melanogaster, GI24583262, Length=153, Percent_Identity=30.0653594771242, Blast_Score=70, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR003593 - InterPro: IPR005938 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR003338 - InterPro: IPR004201 [H]
Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 88392; Mature: 88392
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00674 AAA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE CCCEEEEEEECCCHHHCCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEII HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHEEECCHHHHCCCCCCCCCHHHHHHH KRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITETTNIELR HHHHHHCCCCCCCHHHHHHHCCCHHHHHCCHHHCEEEEEEECCCCCEEEEEEECCCCEEE KKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP CCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECC PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEI CCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECH DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE HCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCE IHIGVPDTKDRYEILQIHTRGMPIEKDEESVTGEPAPEVEIGALDEFEVETGTEIEVDEA EEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEEHHHH AMEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEIDTIPPERL HHHHHHHHHHCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHH EKIVVTKKNFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEK HHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH FVKMGIKAPKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRET HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCHHHHHHH FKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAAT HHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEC NRPNLLDPAILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYV CCCCCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC GADIEAVCREAVMFALRENFDIEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQ CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC RPVETAGLVGYR CCCHHCCCCCCC >Mature Secondary Structure MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE CCCEEEEEEECCCHHHCCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHH QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEII HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHEEECCHHHHCCCCCCCCCHHHHHHH KRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITETTNIELR HHHHHHCCCCCCCHHHHHHHCCCHHHHHCCHHHCEEEEEEECCCCCEEEEEEECCCCEEE KKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP CCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECC PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQEAPSVIFIDEI CCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECH DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE HCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCEEEEECCCCCCCCCHHHHCCCCCCCE IHIGVPDTKDRYEILQIHTRGMPIEKDEESVTGEPAPEVEIGALDEFEVETGTEIEVDEA EEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEEHHHH AMEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLEIDTIPPERL HHHHHHHHHHCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHH EKIVVTKKNFEDALMEAEPSALREIFVEMPSVSWGDVGGLDEAKHSIIEAVEWPIKNPEK HHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH FVKMGIKAPKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRET HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCHHHHHHH FKKARQVSPCVVFFDEIDSIAGMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAAT HHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEC NRPNLLDPAILRPGRFDRLVYVGAPDRKGRLRIFKIHTQNTPLAEDVNLENLADTTEGYV CCCCCCCHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCC GADIEAVCREAVMFALRENFDIEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQ CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC RPVETAGLVGYR CCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11016950 [H]