| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226504
Identifier: 21226504
GI number: 21226504
Start: 514140
End: 515348
Strand: Reverse
Name: 21226504
Synonym: MM_0402
Alternate gene names: NA
Gene position: 515348-514140 (Counterclockwise)
Preceding gene: 21226506
Following gene: 21226503
Centisome position: 12.58
GC content: 36.81
Gene sequence:
>1209_bases ATGATTAAGAACAAAATTGGAATAGGATCGCTAATTTTAGCAATAATGCTGATTGGCATGGCATTGATACCAGCCGTAAG TGCACAGAAAGAGGATAATTATTCTGTAACTGCTGAAGAAGCTTTTAAGCATGCCAATGCGCAAATGATAAACTTTATCG CAACTAACACATCAGGATTTGAAAACTGGACAGGGGCATCTATTGATTCCAAACAATTGGAGCTTTACGATCCAACTGGT CAAAAATTGTATTATCAATTTTCGGTCTATAAAAATAAAACCCTGATAGGTATAATCGACATTGCTGCAGATAAAAGGCT TGGGCAAACAGTCCAACTTGTTTTATTTGAGCCAAAGCCTTTTGATGCCACTACAGTTATGAATAAATCAATAGAAATCG CCAAAAATGAATACCCAGATGGAAAAATCAAATCAACCCAGATGGTTGTATACGATTATCCTCTCGTAGGAGCAATGACT ATAGTAAAGGACAAAATTACAGGAGATGAACATCGGATATTTGTGGATGCTTATACCCTTGATGTGGTACCAGATAAACC TGCAACTGAAACCGAACCTGGAATATGGTCAATATATGAGCAGAGATTAAAGAATGGGATAGAAAATAATATAAAACACT GGCAAAAAAGTGATGAACTTGTTAAATCTATAGAACAAGCAGCAGCTACTAAGGGAGTTAGTATTAATGCGGCAGTCACT GAAGAAAATATTAAAAAACTCAGTGCCGATATAACAAAATCGAGAACCGATGTTGAAGTAGATCTCGGTGCTACTGTATA TGCGCAAATAACGAGCTACTACTGTGCTCCAGCAACTGCCAAAATGCTTACTAAATATTACAATGATGAAAGTCCTCACC AAACTACTATATATGAAATGATGAACGGGGTAGCTCCTAACGGGGTTTATAATTCCGAGCAGTTACTTTATTATCATTCA AGCAGCGGATTAAATAAACCTAATTCATATGTAGAAGATTCTATTAACTTTGAAGAAGCTACTAATGAAATTGATAATGG AAGGCCTTTCAAGAGTGGAGTTACAGGTCATGCTCGAATGTGTCGTGGATACAAAATCAGTGGTTCGGATGAGTATTTGC GTATAGGTGATCCTAACCCTGTGTATTTCCGTATACCTTATTGGGAAGCATTTGGTTCTGAAGTTGACCGTATATATGTG AGGAGTTAA
Upstream 100 bases:
>100_bases CATAAAATCTGCCCTAAGAGGCAATGATTATGTTAGCTTTGCGTATATTTAAGCTTGCTTGATTCTGCCTCCTAGGGAAA AATAACTAGGAGTTAGACAA
Downstream 100 bases:
>100_bases AACCCCTCATTTTTTTGGTGAATGATATGAATAAAATTAGCAAAGTAGTACTTGTTTTTATAGTCATTCTAACTATCGTA ATACTGATAAAGCAATCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MIKNKIGIGSLILAIMLIGMALIPAVSAQKEDNYSVTAEEAFKHANAQMINFIATNTSGFENWTGASIDSKQLELYDPTG QKLYYQFSVYKNKTLIGIIDIAADKRLGQTVQLVLFEPKPFDATTVMNKSIEIAKNEYPDGKIKSTQMVVYDYPLVGAMT IVKDKITGDEHRIFVDAYTLDVVPDKPATETEPGIWSIYEQRLKNGIENNIKHWQKSDELVKSIEQAAATKGVSINAAVT EENIKKLSADITKSRTDVEVDLGATVYAQITSYYCAPATAKMLTKYYNDESPHQTTIYEMMNGVAPNGVYNSEQLLYYHS SSGLNKPNSYVEDSINFEEATNEIDNGRPFKSGVTGHARMCRGYKISGSDEYLRIGDPNPVYFRIPYWEAFGSEVDRIYV RS
Sequences:
>Translated_402_residues MIKNKIGIGSLILAIMLIGMALIPAVSAQKEDNYSVTAEEAFKHANAQMINFIATNTSGFENWTGASIDSKQLELYDPTG QKLYYQFSVYKNKTLIGIIDIAADKRLGQTVQLVLFEPKPFDATTVMNKSIEIAKNEYPDGKIKSTQMVVYDYPLVGAMT IVKDKITGDEHRIFVDAYTLDVVPDKPATETEPGIWSIYEQRLKNGIENNIKHWQKSDELVKSIEQAAATKGVSINAAVT EENIKKLSADITKSRTDVEVDLGATVYAQITSYYCAPATAKMLTKYYNDESPHQTTIYEMMNGVAPNGVYNSEQLLYYHS SSGLNKPNSYVEDSINFEEATNEIDNGRPFKSGVTGHARMCRGYKISGSDEYLRIGDPNPVYFRIPYWEAFGSEVDRIYV RS >Mature_402_residues MIKNKIGIGSLILAIMLIGMALIPAVSAQKEDNYSVTAEEAFKHANAQMINFIATNTSGFENWTGASIDSKQLELYDPTG QKLYYQFSVYKNKTLIGIIDIAADKRLGQTVQLVLFEPKPFDATTVMNKSIEIAKNEYPDGKIKSTQMVVYDYPLVGAMT IVKDKITGDEHRIFVDAYTLDVVPDKPATETEPGIWSIYEQRLKNGIENNIKHWQKSDELVKSIEQAAATKGVSINAAVT EENIKKLSADITKSRTDVEVDLGATVYAQITSYYCAPATAKMLTKYYNDESPHQTTIYEMMNGVAPNGVYNSEQLLYYHS SSGLNKPNSYVEDSINFEEATNEIDNGRPFKSGVTGHARMCRGYKISGSDEYLRIGDPNPVYFRIPYWEAFGSEVDRIYV RS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44952; Mature: 44952
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNKIGIGSLILAIMLIGMALIPAVSAQKEDNYSVTAEEAFKHANAQMINFIATNTSGF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCEEEEEEEECCCCC ENWTGASIDSKQLELYDPTGQKLYYQFSVYKNKTLIGIIDIAADKRLGQTVQLVLFEPKP CCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCC FDATTVMNKSIEIAKNEYPDGKIKSTQMVVYDYPLVGAMTIVKDKITGDEHRIFVDAYTL CCHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHEEHHHCCCCCCCEEEEEEEEE DVVPDKPATETEPGIWSIYEQRLKNGIENNIKHWQKSDELVKSIEQAAATKGVSINAAVT EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC EENIKKLSADITKSRTDVEVDLGATVYAQITSYYCAPATAKMLTKYYNDESPHQTTIYEM HHHHHHHHHHHHCCCCCEEEECCCEEEEHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHH MNGVAPNGVYNSEQLLYYHSSSGLNKPNSYVEDSINFEEATNEIDNGRPFKSGVTGHARM HCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHH CRGYKISGSDEYLRIGDPNPVYFRIPYWEAFGSEVDRIYVRS HCCEEECCCCCEEEECCCCCEEEEECCHHHHCCCCCEEEECC >Mature Secondary Structure MIKNKIGIGSLILAIMLIGMALIPAVSAQKEDNYSVTAEEAFKHANAQMINFIATNTSGF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCEEEEEEEECCCCC ENWTGASIDSKQLELYDPTGQKLYYQFSVYKNKTLIGIIDIAADKRLGQTVQLVLFEPKP CCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEECCCC FDATTVMNKSIEIAKNEYPDGKIKSTQMVVYDYPLVGAMTIVKDKITGDEHRIFVDAYTL CCHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHEEHHHCCCCCCCEEEEEEEEE DVVPDKPATETEPGIWSIYEQRLKNGIENNIKHWQKSDELVKSIEQAAATKGVSINAAVT EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC EENIKKLSADITKSRTDVEVDLGATVYAQITSYYCAPATAKMLTKYYNDESPHQTTIYEM HHHHHHHHHHHHCCCCCEEEECCCEEEEHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHH MNGVAPNGVYNSEQLLYYHSSSGLNKPNSYVEDSINFEEATNEIDNGRPFKSGVTGHARM HCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHH CRGYKISGSDEYLRIGDPNPVYFRIPYWEAFGSEVDRIYVRS HCCEEECCCCCEEEECCCCCEEEEECCHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA