| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226494
Identifier: 21226494
GI number: 21226494
Start: 504926
End: 505177
Strand: Direct
Name: 21226494
Synonym: MM_0392
Alternate gene names: NA
Gene position: 504926-505177 (Clockwise)
Preceding gene: 21226491
Following gene: 21226501
Centisome position: 12.33
GC content: 48.41
Gene sequence:
>252_bases ATGGGCTTTTCCCAGCTCCACCTTAACAAAAGCACCTCTCTCCAGGTTACCAAAACCAAACTGGACAGCCTTCAGAGAAA CGGAGTGGAGTTAATGATCCATATGTGCCCGAACTGCCATATCCAGTACGACCGCTACCAGCCTGTAATTGAAAAAGAGT ACGGAGTGGAGTACGACATGGTACACATGAATATTGCCCAGCTCGTAGCTCTCTCAATGGGCGCAGACCCCTACAAAGTA TGCGGTTTTTAG
Upstream 100 bases:
>100_bases GAGCCTGTGAATATTCTAAACTTTGACCGGCCTCGCCAAAATTAGATCCTCTCTATAAGACAAATTCTGATAAAACACCG CCCTCACCCTTACTTGCGGA
Downstream 100 bases:
>100_bases ACTCACTCCGTGCCTCTGGAAGGTTTTCTTGAAAAGGCCGGTTTAATATAAAATCCCGTTTTAAAGTTCAACCGGTCATC TTTTTTATTACATCGGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: CoB-CoM Heterodisulfide Reductase; Heterodisulfide Reductase Subunit HdrB; Heterodisulfide Reductase Subunit B HdrB
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MGFSQLHLNKSTSLQVTKTKLDSLQRNGVELMIHMCPNCHIQYDRYQPVIEKEYGVEYDMVHMNIAQLVALSMGADPYKV CGF
Sequences:
>Translated_83_residues MGFSQLHLNKSTSLQVTKTKLDSLQRNGVELMIHMCPNCHIQYDRYQPVIEKEYGVEYDMVHMNIAQLVALSMGADPYKV CGF >Mature_82_residues GFSQLHLNKSTSLQVTKTKLDSLQRNGVELMIHMCPNCHIQYDRYQPVIEKEYGVEYDMVHMNIAQLVALSMGADPYKVC GF
Specific function: Unknown
COG id: COG2048
COG function: function code C; Heterodisulfide reductase, subunit B
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9509; Mature: 9378
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSQLHLNKSTSLQVTKTKLDSLQRNGVELMIHMCPNCHIQYDRYQPVIEKEYGVEYDM CCCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEEE VHMNIAQLVALSMGADPYKVCGF EHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure GFSQLHLNKSTSLQVTKTKLDSLQRNGVELMIHMCPNCHIQYDRYQPVIEKEYGVEYDM CCCCCCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCCCEEEE VHMNIAQLVALSMGADPYKVCGF EHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA