Click here to switch to the map view.

The map label for this gene is 21226470

Identifier: 21226470

GI number: 21226470

Start: 472947

End: 473264

Strand: Direct

Name: 21226470

Synonym: MM_0368

Alternate gene names: NA

Gene position: 472947-473264 (Clockwise)

Preceding gene: 21226468

Following gene: 21226471

Centisome position: 11.55

GC content: 45.6

Gene sequence:

>318_bases
ATGAGTGAGAAACTGGGTTTTACTCCGCACATTCTTGAGATACTTGGATGCCTTGACAGCGATTCCCTGAAAAAATATAA
CAGATGCAACAAAAAACTGCTGTCAGATGGCGCCCTGCCCGCAAAAGTCAAGATTCTGATAGCGCTTGCAGTAGTTGCAT
CCAAGCAGTGTGAAAGATGTACCGTTGTACAGATGCAGAGCGCCCTCAAGAACGGTGCTACCAAAGAGGAAATAATGGAA
GTTATGGATGTGATATTCATAACCTCGGGAGCCCCTGCCGTAGCAGCCTGCAGAGACGCATTGAAATTACTCAAATAA

Upstream 100 bases:

>100_bases
GATAAATAATAAGCATATAGATTTTAATGTAACATCAAACTGGGGGTTAACAAATATGGAAGAACACAGAGACCTTGAAC
ATGAAGAATTACTGGAAAGT

Downstream 100 bases:

>100_bases
AATAGGAATAAAACTAAAAGCATAAACTAAAGCCGCTTCAGACCTGAACATTTTTCCGGAAATTTCCGACCGAAAAAACG
TTTTTTGCATAAGAATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase Family Protein; 4-Carboxymuconolactone Decarboxylase

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSEKLGFTPHILEILGCLDSDSLKKYNRCNKKLLSDGALPAKVKILIALAVVASKQCERCTVVQMQSALKNGATKEEIME
VMDVIFITSGAPAVAACRDALKLLK

Sequences:

>Translated_105_residues
MSEKLGFTPHILEILGCLDSDSLKKYNRCNKKLLSDGALPAKVKILIALAVVASKQCERCTVVQMQSALKNGATKEEIME
VMDVIFITSGAPAVAACRDALKLLK
>Mature_104_residues
SEKLGFTPHILEILGCLDSDSLKKYNRCNKKLLSDGALPAKVKILIALAVVASKQCERCTVVQMQSALKNGATKEEIMEV
MDVIFITSGAPAVAACRDALKLLK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11350; Mature: 11219

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKLGFTPHILEILGCLDSDSLKKYNRCNKKLLSDGALPAKVKILIALAVVASKQCERC
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH
TVVQMQSALKNGATKEEIMEVMDVIFITSGAPAVAACRDALKLLK
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
SEKLGFTPHILEILGCLDSDSLKKYNRCNKKLLSDGALPAKVKILIALAVVASKQCERC
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH
TVVQMQSALKNGATKEEIMEVMDVIFITSGAPAVAACRDALKLLK
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA