| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is yfiQ [C]
Identifier: 21226460
GI number: 21226460
Start: 465615
End: 467021
Strand: Reverse
Name: yfiQ [C]
Synonym: MM_0358
Alternate gene names: 21226460
Gene position: 467021-465615 (Counterclockwise)
Preceding gene: 21226461
Following gene: 21226457
Centisome position: 11.4
GC content: 47.69
Gene sequence:
>1407_bases ATGGATATAGAGGAAGCGGATAAAGAAAAAACTGGCACTGAAAATAATCTTGATTTTTTCTTCAAGCCTGAAAGCATAGC TCTGATAGGAGCATCCCCGAACCCTGAAAAACTTTCCCACACTATATTGAAAAGCCTCCGGGAAATGAATTTCAAAGGGA AGATCTATCCTGTAAATCCGGGCTACGAGGAGATTGAGGGCCTCAAATGCTATTCAGCACCGGGGGAGATTAATAACAGG ATTGACATCGCAATTTTTGCGATCCCGGCCAGAGCAGTCCTTGATACACTGAAAGAGCCTGCAGGAAATATAAAAGGAGC CGTAATTGTAAGTTCAGGTTTTAGGGAAATGGGGCCCGGCGGAATGAAAATGGAAGATGAGCTGAGGGACCTGTTAAAAG AAAAAGGGATCAGGGCTATGGGTCCCAACTGCCTCGGCATATATGATACAGTTTCAAATGTGGACACTTTTTTCATCGAA CGGGAAAAGATAGAGAGGCCTGTCAGGGATGGGGTTTCCGTGCTTACTCAGAGCGGGTCTTTTGCAGCCATGATAATGGA TGAGCTGGCTAACGAAGGGGCAGGCGTTGCAAGGGTTGTGAGTTACGGAAATAAAGTGGACGTGAACGAAAGTGACTGCC TTGAATTCCTTGCAGAAGACGAAGCCACGAAAGCAGTTGCCCTTTACATAGAATCCGTATCAGACGGCCGAAAGTTCCTT AAAGCTGCCTCAGGCTGCGTAAAAAAGAAACCCGTAGTTGCTCTCAAAGTAGGGAAGCGGGAGCCCGGAGCAAGGGCAGC AAGCTCGCACACAGGCGCTATCAGCGGGATGTATGAAGCGTATGAAGCTGCTTTTCGGAAAACAGGCATAATCGAGGTTG CAAGCTACGAAGAATTGAAAGACGCCTGCAAAGTCCTTAACAGGTATTCCCCTGTAAATGGAAAAAGAGTCCTCATAATA ACTGACGGGGGAGGGATAGGCATTTCCATTGCCGATGCATGTGAGGAAGCAGGGCTCAGGGTCCCTGAACTTTCAGAAGC CGCAGTAAGGAAGCTGAAAGAAAAACTTCCGGCTTTTGCTTCCGTAAGAAACCCTGTTGACCTGACAGGCAGTGTGAGGG ATGAACATTATGTTGCTGCCCTTCAGGAAACCCCTTACGAGGAATATGACCTGGCAATTGTAAGCCTCCTATGGGGCCCG CCTCTTCTTACCGAAGGCGTTGCTGAAAAAATCAAAAACTTTGCTGATAGCTGTGGAAAACCTGTAATTATCAGTTCACC GGGTGGGAAATTCAGCAGGGAACTGGCTTCGGCATTTACAAAAACCGGAATGCCGGTCTTTTTCTCTCCTGAAAGTGCAG TAAGGGCTGCAGCAGTGCTGTGCGGAGGGAATGGCAGGCAGAAATAA
Upstream 100 bases:
>100_bases CCGATTACCTGAAATTAGAATTCTTTTATACAAATAGTCCATAAATTATTCTAAATAAGAATTATCACATATCTGGAAGG AAAACCCGGTGAGGTTTTGA
Downstream 100 bases:
>100_bases AGTGTTAAGCTGTAATGAAAGATAAGCAGAAATCAATGTAAGTAGAAATCAATGTAAGTAGAAATCGAGCTTGAAAGATA AAAGAGCTAAGAATTCCGGG
Product: Acetyl-CoA synthetase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MDIEEADKEKTGTENNLDFFFKPESIALIGASPNPEKLSHTILKSLREMNFKGKIYPVNPGYEEIEGLKCYSAPGEINNR IDIAIFAIPARAVLDTLKEPAGNIKGAVIVSSGFREMGPGGMKMEDELRDLLKEKGIRAMGPNCLGIYDTVSNVDTFFIE REKIERPVRDGVSVLTQSGSFAAMIMDELANEGAGVARVVSYGNKVDVNESDCLEFLAEDEATKAVALYIESVSDGRKFL KAASGCVKKKPVVALKVGKREPGARAASSHTGAISGMYEAYEAAFRKTGIIEVASYEELKDACKVLNRYSPVNGKRVLII TDGGGIGISIADACEEAGLRVPELSEAAVRKLKEKLPAFASVRNPVDLTGSVRDEHYVAALQETPYEEYDLAIVSLLWGP PLLTEGVAEKIKNFADSCGKPVIISSPGGKFSRELASAFTKTGMPVFFSPESAVRAAAVLCGGNGRQK
Sequences:
>Translated_468_residues MDIEEADKEKTGTENNLDFFFKPESIALIGASPNPEKLSHTILKSLREMNFKGKIYPVNPGYEEIEGLKCYSAPGEINNR IDIAIFAIPARAVLDTLKEPAGNIKGAVIVSSGFREMGPGGMKMEDELRDLLKEKGIRAMGPNCLGIYDTVSNVDTFFIE REKIERPVRDGVSVLTQSGSFAAMIMDELANEGAGVARVVSYGNKVDVNESDCLEFLAEDEATKAVALYIESVSDGRKFL KAASGCVKKKPVVALKVGKREPGARAASSHTGAISGMYEAYEAAFRKTGIIEVASYEELKDACKVLNRYSPVNGKRVLII TDGGGIGISIADACEEAGLRVPELSEAAVRKLKEKLPAFASVRNPVDLTGSVRDEHYVAALQETPYEEYDLAIVSLLWGP PLLTEGVAEKIKNFADSCGKPVIISSPGGKFSRELASAFTKTGMPVFFSPESAVRAAAVLCGGNGRQK >Mature_468_residues MDIEEADKEKTGTENNLDFFFKPESIALIGASPNPEKLSHTILKSLREMNFKGKIYPVNPGYEEIEGLKCYSAPGEINNR IDIAIFAIPARAVLDTLKEPAGNIKGAVIVSSGFREMGPGGMKMEDELRDLLKEKGIRAMGPNCLGIYDTVSNVDTFFIE REKIERPVRDGVSVLTQSGSFAAMIMDELANEGAGVARVVSYGNKVDVNESDCLEFLAEDEATKAVALYIESVSDGRKFL KAASGCVKKKPVVALKVGKREPGARAASSHTGAISGMYEAYEAAFRKTGIIEVASYEELKDACKVLNRYSPVNGKRVLII TDGGGIGISIADACEEAGLRVPELSEAAVRKLKEKLPAFASVRNPVDLTGSVRDEHYVAALQETPYEEYDLAIVSLLWGP PLLTEGVAEKIKNFADSCGKPVIISSPGGKFSRELASAFTKTGMPVFFSPESAVRAAAVLCGGNGRQK
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=452, Percent_Identity=25.6637168141593, Blast_Score=172, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 50377; Mature: 50377
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIEEADKEKTGTENNLDFFFKPESIALIGASPNPEKLSHTILKSLREMNFKGKIYPVNP CCCCHHHHHHCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCC GYEEIEGLKCYSAPGEINNRIDIAIFAIPARAVLDTLKEPAGNIKGAVIVSSGFREMGPG CHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCHHCCCC GMKMEDELRDLLKEKGIRAMGPNCLGIYDTVSNVDTFFIEREKIERPVRDGVSVLTQSGS CCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHEEEHHHHHHHHHHHHHHHHCCCC FAAMIMDELANEGAGVARVVSYGNKVDVNESDCLEFLAEDEATKAVALYIESVSDGRKFL HHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHEEEEEEHHHHHHHHHH KAASGCVKKKPVVALKVGKREPGARAASSHTGAISGMYEAYEAAFRKTGIIEVASYEELK HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHH DACKVLNRYSPVNGKRVLIITDGGGIGISIADACEEAGLRVPELSEAAVRKLKEKLPAFA HHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH SVRNPVDLTGSVRDEHYVAALQETPYEEYDLAIVSLLWGPPLLTEGVAEKIKNFADSCGK HCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PVIISSPGGKFSRELASAFTKTGMPVFFSPESAVRAAAVLCGGNGRQK CEEEECCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHEEECCCCCCC >Mature Secondary Structure MDIEEADKEKTGTENNLDFFFKPESIALIGASPNPEKLSHTILKSLREMNFKGKIYPVNP CCCCHHHHHHCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCC GYEEIEGLKCYSAPGEINNRIDIAIFAIPARAVLDTLKEPAGNIKGAVIVSSGFREMGPG CHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCHHCCCC GMKMEDELRDLLKEKGIRAMGPNCLGIYDTVSNVDTFFIEREKIERPVRDGVSVLTQSGS CCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHEEEHHHHHHHHHHHHHHHHCCCC FAAMIMDELANEGAGVARVVSYGNKVDVNESDCLEFLAEDEATKAVALYIESVSDGRKFL HHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHEEEEEEHHHHHHHHHH KAASGCVKKKPVVALKVGKREPGARAASSHTGAISGMYEAYEAAFRKTGIIEVASYEELK HHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHH DACKVLNRYSPVNGKRVLIITDGGGIGISIADACEEAGLRVPELSEAAVRKLKEKLPAFA HHHHHHHHCCCCCCCEEEEEECCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH SVRNPVDLTGSVRDEHYVAALQETPYEEYDLAIVSLLWGPPLLTEGVAEKIKNFADSCGK HCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC PVIISSPGGKFSRELASAFTKTGMPVFFSPESAVRAAAVLCGGNGRQK CEEEECCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]