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The map label for this gene is 21226395

Identifier: 21226395

GI number: 21226395

Start: 391457

End: 392722

Strand: Reverse

Name: 21226395

Synonym: MM_0293

Alternate gene names: NA

Gene position: 392722-391457 (Counterclockwise)

Preceding gene: 21226396

Following gene: 21226394

Centisome position: 9.59

GC content: 47.95

Gene sequence:

>1266_bases
ATGAAACAAACTGCAGAATCCATTAGAGACCGGTTTATGAAACTCGGCATCGATGTTCCTGTTGAGGACATCGAAAGCAG
ACTCGACGAGCTGATTAAGAAGTTCAAGGTACCTTCTAACGAAGCGCAGCGCAGCGTAACAAACTACTTTTTGAAGAAAT
ATTCCATTCCTAAAAATGAGTTTTATGTCAGGCAGGCTGAACCCCAGCTCACCAAAATTGTGGACATTGTAGAGAATGGG
CAGTGGGCAAACCTTAAAGCAAAGGTTATTCAGCTGTGGGAAAACACTCATGAATCCATTTCTCAGGTCGGGCTTCTTGG
AGATGAGACAGGAATCATAAAGTTTACCATCTGGAAAAATGCCGAACTTCCCCTTCTTGAACAGGGGGAAAGCTACCTTC
TAAGGAGCGTCGTTGTCGGGGAATACAATGATAGGTTCCAGGTCCAGGTTAACAAGAACAGTTCCATAGAGAAGCTCTCC
GAGCCCATTGAAGTTGGAGGCGGCGATTTCACTCCAGCAGCAAGGGAAGCTGAGCTGAGAAATATTGCTGACCTTACAGG
AAACCAGTGGGCAACAGTAAGAGGGAAAGTTATCCAGCTCTGGGAGAACTCCCACGAATCTATAGAACAGGCAGGGCTTA
TAGGGGATGAGACCGGAGTCATCAAATTTACTAACTGGGCAAGTTCCGAGCTTCCGGATATGGAAGAGGGCAGGAGCTAC
CTGCTGAAGAATGTTGTTGTTAACGAATGGAACGGCAAGGCTCAGGTCCAGCTTAACAGGTCAAGTTCCATAGAAGAGCT
CGACGAAGATATTGAAGTAAGGACCTCCATGTCTTCCTATTTCGGGGCAATGGTGGATATACAGACCGGTTCCGGGCTCA
TAAAACGCTGTCCTGAATGTAAAAGGGCTCTTGTTAAAGGGGCATGTGCAGAACATGGTAAGGTTAAAGGGGAATATGAC
CTCAGGATAAAAGCGGTCCTCGATTCCGGGACTTCCACTCAGGACGCCCTTATCAACAGGGAACTTACGGAAGAGCTTTC
AGGCATCTCTCTTGACAGCGCCATTGCAATGGCTGCAGATGCTCTTGATCCGGGAGTCGTACTGGACAAGCTCAAACACG
AGCTTGTCGGCAGGTATTATACCATCACCGGACACAAGCTTGACCGCTATATCCTTGTAGAATCGATTACTCCACGGACT
TCCCTTGACAGGGAGCTCCTTGACCAGATGCTTGCTGAACCGATTGCTCAGCCGGAGGTGGAGTGA

Upstream 100 bases:

>100_bases
CTTTCACCCCGCATCACTCAACTTTATATCCTCTGCTGCAGTAATTTAGAGTGCCTCACAATAAAATTATGATAACCATG
AGGCTTGCGGAGAATGAAAT

Downstream 100 bases:

>100_bases
ATGGCAGGCTTCTTCAGAGAAGCGGCTCGCAGGGTTTTTGCCCGGGAGCTGAAAGACTCGAACCTCACCTCAAAGGATGA
AAGCGACCAGTATGCCCCTC

Product: replication factor A

Products: NA

Alternate protein names: Replication Protein A

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKQTAESIRDRFMKLGIDVPVEDIESRLDELIKKFKVPSNEAQRSVTNYFLKKYSIPKNEFYVRQAEPQLTKIVDIVENG
QWANLKAKVIQLWENTHESISQVGLLGDETGIIKFTIWKNAELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLS
EPIEVGGGDFTPAAREAELRNIADLTGNQWATVRGKVIQLWENSHESIEQAGLIGDETGVIKFTNWASSELPDMEEGRSY
LLKNVVVNEWNGKAQVQLNRSSSIEELDEDIEVRTSMSSYFGAMVDIQTGSGLIKRCPECKRALVKGACAEHGKVKGEYD
LRIKAVLDSGTSTQDALINRELTEELSGISLDSAIAMAADALDPGVVLDKLKHELVGRYYTITGHKLDRYILVESITPRT
SLDRELLDQMLAEPIAQPEVE

Sequences:

>Translated_421_residues
MKQTAESIRDRFMKLGIDVPVEDIESRLDELIKKFKVPSNEAQRSVTNYFLKKYSIPKNEFYVRQAEPQLTKIVDIVENG
QWANLKAKVIQLWENTHESISQVGLLGDETGIIKFTIWKNAELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLS
EPIEVGGGDFTPAAREAELRNIADLTGNQWATVRGKVIQLWENSHESIEQAGLIGDETGVIKFTNWASSELPDMEEGRSY
LLKNVVVNEWNGKAQVQLNRSSSIEELDEDIEVRTSMSSYFGAMVDIQTGSGLIKRCPECKRALVKGACAEHGKVKGEYD
LRIKAVLDSGTSTQDALINRELTEELSGISLDSAIAMAADALDPGVVLDKLKHELVGRYYTITGHKLDRYILVESITPRT
SLDRELLDQMLAEPIAQPEVE
>Mature_421_residues
MKQTAESIRDRFMKLGIDVPVEDIESRLDELIKKFKVPSNEAQRSVTNYFLKKYSIPKNEFYVRQAEPQLTKIVDIVENG
QWANLKAKVIQLWENTHESISQVGLLGDETGIIKFTIWKNAELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLS
EPIEVGGGDFTPAAREAELRNIADLTGNQWATVRGKVIQLWENSHESIEQAGLIGDETGVIKFTNWASSELPDMEEGRSY
LLKNVVVNEWNGKAQVQLNRSSSIEELDEDIEVRTSMSSYFGAMVDIQTGSGLIKRCPECKRALVKGACAEHGKVKGEYD
LRIKAVLDSGTSTQDALINRELTEELSGISLDSAIAMAADALDPGVVLDKLKHELVGRYYTITGHKLDRYILVESITPRT
SLDRELLDQMLAEPIAQPEVE

Specific function: Unknown

COG id: COG1599

COG function: function code L; Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47203; Mature: 47203

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTAESIRDRFMKLGIDVPVEDIESRLDELIKKFKVPSNEAQRSVTNYFLKKYSIPKNE
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
FYVRQAEPQLTKIVDIVENGQWANLKAKVIQLWENTHESISQVGLLGDETGIIKFTIWKN
EEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
AELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLSEPIEVGGGDFTPAAREAELR
CCCCHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCHHCCCCCCCCCHHHHHHH
NIADLTGNQWATVRGKVIQLWENSHESIEQAGLIGDETGVIKFTNWASSELPDMEEGRSY
HHHHCCCCCEEEECCHHHEEHHCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH
LLKNVVVNEWNGKAQVQLNRSSSIEELDEDIEVRTSMSSYFGAMVDIQTGSGLIKRCPEC
HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCHHH
KRALVKGACAEHGKVKGEYDLRIKAVLDSGTSTQDALINRELTEELSGISLDSAIAMAAD
HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALDPGVVLDKLKHELVGRYYTITGHKLDRYILVESITPRTSLDRELLDQMLAEPIAQPEV
CCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
E
C
>Mature Secondary Structure
MKQTAESIRDRFMKLGIDVPVEDIESRLDELIKKFKVPSNEAQRSVTNYFLKKYSIPKNE
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
FYVRQAEPQLTKIVDIVENGQWANLKAKVIQLWENTHESISQVGLLGDETGIIKFTIWKN
EEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
AELPLLEQGESYLLRSVVVGEYNDRFQVQVNKNSSIEKLSEPIEVGGGDFTPAAREAELR
CCCCHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHCCCHHCCCCCCCCCHHHHHHH
NIADLTGNQWATVRGKVIQLWENSHESIEQAGLIGDETGVIKFTNWASSELPDMEEGRSY
HHHHCCCCCEEEECCHHHEEHHCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH
LLKNVVVNEWNGKAQVQLNRSSSIEELDEDIEVRTSMSSYFGAMVDIQTGSGLIKRCPEC
HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCHHH
KRALVKGACAEHGKVKGEYDLRIKAVLDSGTSTQDALINRELTEELSGISLDSAIAMAAD
HHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALDPGVVLDKLKHELVGRYYTITGHKLDRYILVESITPRTSLDRELLDQMLAEPIAQPEV
CCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA