Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is mntH [H]
Identifier: 21226351
GI number: 21226351
Start: 332703
End: 333359
Strand: Reverse
Name: mntH [H]
Synonym: MM_0249
Alternate gene names: 21226351
Gene position: 333359-332703 (Counterclockwise)
Preceding gene: 21226352
Following gene: 21226350
Centisome position: 8.14
GC content: 44.14
Gene sequence:
>657_bases ATGGCGATAAAGGCACTTTTTTTGAACTGCACACTTAAAAAATCGCCACAGATATCGAACACCCATGCTCTGATTGATAA GGCTGTGGCTATTTTTAAAGAACTTGGTGTTGGTAGTGAAGTCATACGGGTTGTTGACTACAATATAGCTTTCGGGGTTT CTTCGGATGAAGGAAACGGGGATGAATGGCCTTTCATACTTGAAAAAATAAAAGATTGCAATATTCTGGTTATAGCTACC CCTATCTGGTTTGGAGTACTTTCTTCTGTAGCCAAAATGGTGATCGAAAGGCTGGATGGGACATATATGGAAGGAGATCC AGAAACCGGGCAGTATCCTTTATACGGAAAGGTTGCAGGGGTCATGGTTACGGGAAATGAAGACGGGGCACATGATGTAT GTTCTACCATACTTTACAACCTCACGCACCTCGGATGTACCGTGCCTCCCAATGCGGACTGCTACTGGGTTGGAGATGCA GGTCCGGGTCCCAGCTATATAGAAGCAGGAGGGGAAAGACACCTTTATACTAATCGGACAGCGAGGTACATGGTGCATAA CCTTACTTATTTCGCAAAGCTTCTGAAAGAAAACCCTATTCCAACCAGCCTGAAAAAGCTTGATGAGGAGGCAAAAAGAG TAAGTAATAAGGGCTAA
Upstream 100 bases:
>100_bases CCCTGAATAGTTACAATTATAATTATATTAGTTCAGTAATACTTTTTCTAAACATTTTTACTTCCCCGTATATATAACCG CTTTTAGAAACATATATATT
Downstream 100 bases:
>100_bases AACTGCCCTGAAAGCACCAGATTAATCTTCACTATTTTACAAGTTTTGCTGGGCAGCATTTTACTGATCGAGATGGAGGG GAGTATTTGACTGAGGGGGA
Product: BRAMP
Products: NA
Alternate protein names: BRAMP [H]
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAIKALFLNCTLKKSPQISNTHALIDKAVAIFKELGVGSEVIRVVDYNIAFGVSSDEGNGDEWPFILEKIKDCNILVIAT PIWFGVLSSVAKMVIERLDGTYMEGDPETGQYPLYGKVAGVMVTGNEDGAHDVCSTILYNLTHLGCTVPPNADCYWVGDA GPGPSYIEAGGERHLYTNRTARYMVHNLTYFAKLLKENPIPTSLKKLDEEAKRVSNKG
Sequences:
>Translated_218_residues MAIKALFLNCTLKKSPQISNTHALIDKAVAIFKELGVGSEVIRVVDYNIAFGVSSDEGNGDEWPFILEKIKDCNILVIAT PIWFGVLSSVAKMVIERLDGTYMEGDPETGQYPLYGKVAGVMVTGNEDGAHDVCSTILYNLTHLGCTVPPNADCYWVGDA GPGPSYIEAGGERHLYTNRTARYMVHNLTYFAKLLKENPIPTSLKKLDEEAKRVSNKG >Mature_217_residues AIKALFLNCTLKKSPQISNTHALIDKAVAIFKELGVGSEVIRVVDYNIAFGVSSDEGNGDEWPFILEKIKDCNILVIATP IWFGVLSSVAKMVIERLDGTYMEGDPETGQYPLYGKVAGVMVTGNEDGAHDVCSTILYNLTHLGCTVPPNADCYWVGDAG PGPSYIEAGGERHLYTNRTARYMVHNLTYFAKLLKENPIPTSLKKLDEEAKRVSNKG
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the NRAMP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 - InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF03358 FMN_red; PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 23874; Mature: 23742
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKALFLNCTLKKSPQISNTHALIDKAVAIFKELGVGSEVIRVVDYNIAFGVSSDEGNG CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHEEECEEEEECCCCCCCC DEWPFILEKIKDCNILVIATPIWFGVLSSVAKMVIERLDGTYMEGDPETGQYPLYGKVAG CCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEE VMVTGNEDGAHDVCSTILYNLTHLGCTVPPNADCYWVGDAGPGPSYIEAGGERHLYTNRT EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCCEEECCHH ARYMVHNLTYFAKLLKENPIPTSLKKLDEEAKRVSNKG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure AIKALFLNCTLKKSPQISNTHALIDKAVAIFKELGVGSEVIRVVDYNIAFGVSSDEGNG CCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHEEECEEEEECCCCCCCC DEWPFILEKIKDCNILVIATPIWFGVLSSVAKMVIERLDGTYMEGDPETGQYPLYGKVAG CCCHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEE VMVTGNEDGAHDVCSTILYNLTHLGCTVPPNADCYWVGDAGPGPSYIEAGGERHLYTNRT EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHCCCCCEEECCHH ARYMVHNLTYFAKLLKENPIPTSLKKLDEEAKRVSNKG HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972; 9632246 [H]