| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is hflB [C]
Identifier: 21226350
GI number: 21226350
Start: 330322
End: 332616
Strand: Reverse
Name: hflB [C]
Synonym: MM_0248
Alternate gene names: 21226350
Gene position: 332616-330322 (Counterclockwise)
Preceding gene: 21226351
Following gene: 21226349
Centisome position: 8.12
GC content: 49.89
Gene sequence:
>2295_bases TTGACTGAGGGGGATAAATCCACTATAAAACTTAAGGTTGCAGAAGCCGATCAACGCGATGTGGGAAAAGGAATTGTCCG GATTGACGAGAAATTCCGGGAGAAACTGGGACTGAAACCTTTTGATGTTGTGGAAATCAGAGGTGGAAAATCAACTTCTG CTCTGATAGGGCGTCCGTATCCCAGTGATTCCGGGCTTGATATTGTCCGCATGGACGGGCTTATCCGTATGAATGCAAAG ACCAGCATAGGGGAATATGTGGACATCCGCAAAGCTGATTGGAAAGAAGCAAAGAGTGTGACCCTTGCGCCTGTAGCCAA GGGCATGCAGATCTACGCTCCCAGTGAGACCCTCAAAGCCGTATTCATGAACCGCACGGTTTCAAAAGGGGACTTTATCT CTACCACAAGCCTTCGGAGGTCGCGGGAAAGGGAAACTTTCGGCAAGGGGGTAATGTTCGAGGATTTCTTTCAGGACTTC TTCGGACAGGGTTTTGGGCAATCTTTCGGTCTTGGGGAAATAAAACTTCAGGTTGTATCCACCTCTCCGTCCGGGATAGT AAAGATTACGGACATGACGCAGGTGGAACTTCTGCCGGAAGCAACGGAAATAACTCCTGAGCAAAACATTCCAACTGTAA TGTACGAAGACCTGGGCGGGCTTAAAGACGCCATTGGCAGGGTCAGGGAAATGATAGAGCTGCCTCTGAAACACCCCGAG CTCTTTGACAGGCTCGGAATCGACGCTCCCAAGGGAGTGCTGCTTCATGGCCCTCCCGGGACGGGCAAAACTATGCTTGC AAAAGCCGTTGCTAATGAATCGGATGCTTATTTCATTTCAATTAACGGCCCCGAGATCATGTCAAAATACTATGGGGAAT CCGAGAGGGCAATAAGGGAGATCTTTGAGGACGCAGAAAAGAATGCTCCTGCGATTATCTTCCTGGACGAAATTGATTCT ATTGCCCCTAAAAGGGCTGAGGTCACGGGTGAAGTTGAACGGAGGGTGGTCGCCCAGCTTCTTTCCCTTATGGACGGGCT TAAAGCCCGCAAGAATGTGATTGTTATAGGGTCTACCAACCGCCCTGAAGCCATAGATATCGCACTCCGCCGTCCTGGAA GGTTTGACCGGGAGATTGAGCTCAGAGTTCCGGACACGGAAGGCAGGCTTGAGATTTTCCAGATTCATACAAGAGGGATG CCCCTTGCGGACAACGTAAATCTTATGGATTTTGCCCAGATAACCTACGGTTTTGTGGGGGCAGACATTGCTGCACTGTG CCGGGAAGCAGCCATGAGTGCTCTGAGGCGTATTTTGCCGAAAATCAACCTCAACGAGCCTGAAATCCCGGGTGAGATCC TCGATTCCCTTCAGGTAACAAGGGAAGACTTTGAAAATGCCCTGAAAGATGTCCAGCCGTCTGCCATACGAGAGATCCTG ATAGAGGTCCCCAATATTGGCTGGGATGACGTGGGAGGGCTTGGAGAGGTAAAAGAGCTCCTGAAAGAGGCTGTGGAATG GCCGTTGAAGAGTCCAGAGTCTTACAGGAATATAGGGGTTGAGGCTCCTAAAGGCGTGCTCTTATACGGTCCTCCGGGTA CCGGGAAAACCCTCCTTGCAAAAGCTATTGCCCACGAGTCCGATGCTAACTTCATCACAGCCAAAGGAAGTGATCTTCTT TCCAAATGGTACGGTGAGTCTGAAAAAAGGATTGCTGAGGTATTTACGCGCGCAAGACAGGTCGCCCCGTCTATAATTTT CCTTGATGAACTCGATTCCCTTGCACCGGTCCGCGGGGCTTCCACAGGTGAGCCTCAGGTAACAGCAAGAATCCTTAACC AGCTTCTCTCGGAAATGGACGGGCTTGAAGAGCTAAGGGCTGTTGTGGTAATCGGGGCAACCAACCGTCCTGATATGATA GACCCTGCCCTTCTCAGGCCTGGGCGTTTTGATGAGCTGATTCTTGTTCCTGTCCCTGATGAGGGGGCACGCAGGGAGAT TTTCAGGGTGCATACCGAGAATATGGCTCTTGCAGAAGACGTTGATATTGAAAAACTTGTTTCTCTTACAGACCAGTATA CGGGTGCGGATATTGCAGCTGTATGCAAAAAGGCGGGAAGGTATGCCCTGCGTGAAGATCTGCATGCAAAAAGCGTCAGA CAAAAACACTTCCTTCAGGCAATTGAAGAGACAGGGCCTTCGGTCACCCCGGACACAATGAAATATTACCAGGCAATAAG AGGAGAGCTGAGAAAAAGAAAATCAAAGGAAATAGAGAGCCCTTACTATATCTGA
Upstream 100 bases:
>100_bases GTAATAAGGGCTAAAACTGCCCTGAAAGCACCAGATTAATCTTCACTATTTTACAAGTTTTGCTGGGCAGCATTTTACTG ATCGAGATGGAGGGGAGTAT
Downstream 100 bases:
>100_bases GTACAGATAATGGGTTATACCTGCATTCGTATTGCAGATTGTACACGAATTCGTATGGCAGGTTTTGTCTGAATTCATAT TGCACAGGCTATATCTGAAT
Product: cell division cycle protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTEGDKSTIKLKVAEADQRDVGKGIVRIDEKFREKLGLKPFDVVEIRGGKSTSALIGRPYPSDSGLDIVRMDGLIRMNAK TSIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKAVFMNRTVSKGDFISTTSLRRSRERETFGKGVMFEDFFQDF FGQGFGQSFGLGEIKLQVVSTSPSGIVKITDMTQVELLPEATEITPEQNIPTVMYEDLGGLKDAIGRVREMIELPLKHPE LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDS IAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGM PLADNVNLMDFAQITYGFVGADIAALCREAAMSALRRILPKINLNEPEIPGEILDSLQVTREDFENALKDVQPSAIREIL IEVPNIGWDDVGGLGEVKELLKEAVEWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLL SKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGASTGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDMI DPALLRPGRFDELILVPVPDEGARREIFRVHTENMALAEDVDIEKLVSLTDQYTGADIAAVCKKAGRYALREDLHAKSVR QKHFLQAIEETGPSVTPDTMKYYQAIRGELRKRKSKEIESPYYI
Sequences:
>Translated_764_residues MTEGDKSTIKLKVAEADQRDVGKGIVRIDEKFREKLGLKPFDVVEIRGGKSTSALIGRPYPSDSGLDIVRMDGLIRMNAK TSIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKAVFMNRTVSKGDFISTTSLRRSRERETFGKGVMFEDFFQDF FGQGFGQSFGLGEIKLQVVSTSPSGIVKITDMTQVELLPEATEITPEQNIPTVMYEDLGGLKDAIGRVREMIELPLKHPE LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDS IAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGM PLADNVNLMDFAQITYGFVGADIAALCREAAMSALRRILPKINLNEPEIPGEILDSLQVTREDFENALKDVQPSAIREIL IEVPNIGWDDVGGLGEVKELLKEAVEWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLL SKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGASTGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDMI DPALLRPGRFDELILVPVPDEGARREIFRVHTENMALAEDVDIEKLVSLTDQYTGADIAAVCKKAGRYALREDLHAKSVR QKHFLQAIEETGPSVTPDTMKYYQAIRGELRKRKSKEIESPYYI >Mature_763_residues TEGDKSTIKLKVAEADQRDVGKGIVRIDEKFREKLGLKPFDVVEIRGGKSTSALIGRPYPSDSGLDIVRMDGLIRMNAKT SIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKAVFMNRTVSKGDFISTTSLRRSRERETFGKGVMFEDFFQDFF GQGFGQSFGLGEIKLQVVSTSPSGIVKITDMTQVELLPEATEITPEQNIPTVMYEDLGGLKDAIGRVREMIELPLKHPEL FDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIREIFEDAEKNAPAIIFLDEIDSI APKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNRPEAIDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMP LADNVNLMDFAQITYGFVGADIAALCREAAMSALRRILPKINLNEPEIPGEILDSLQVTREDFENALKDVQPSAIREILI EVPNIGWDDVGGLGEVKELLKEAVEWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLAKAIAHESDANFITAKGSDLLS KWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGASTGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDMID PALLRPGRFDELILVPVPDEGARREIFRVHTENMALAEDVDIEKLVSLTDQYTGADIAAVCKKAGRYALREDLHAKSVRQ KHFLQAIEETGPSVTPDTMKYYQAIRGELRKRKSKEIESPYYI
Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving
COG id: COG0464
COG function: function code O; ATPases of the AAA+ class
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]
Homologues:
Organism=Homo sapiens, GI6005942, Length=781, Percent_Identity=41.3572343149808, Blast_Score=595, Evalue=1e-170, Organism=Homo sapiens, GI157671927, Length=537, Percent_Identity=51.5828677839851, Blast_Score=575, Evalue=1e-164, Organism=Homo sapiens, GI45643125, Length=604, Percent_Identity=41.887417218543, Blast_Score=457, Evalue=1e-128, Organism=Homo sapiens, GI45643123, Length=604, Percent_Identity=41.887417218543, Blast_Score=456, Evalue=1e-128, Organism=Homo sapiens, GI229577436, Length=593, Percent_Identity=40.6408094435076, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI4505725, Length=481, Percent_Identity=35.5509355509356, Blast_Score=281, Evalue=2e-75, Organism=Homo sapiens, GI194018488, Length=516, Percent_Identity=35.8527131782946, Blast_Score=270, Evalue=4e-72, Organism=Homo sapiens, GI24497618, Length=284, Percent_Identity=41.9014084507042, Blast_Score=235, Evalue=2e-61, Organism=Homo sapiens, GI24497435, Length=267, Percent_Identity=46.0674157303371, Blast_Score=232, Evalue=1e-60, Organism=Homo sapiens, GI153792536, Length=276, Percent_Identity=42.0289855072464, Blast_Score=231, Evalue=3e-60, Organism=Homo sapiens, GI24430151, Length=264, Percent_Identity=44.6969696969697, Blast_Score=226, Evalue=9e-59, Organism=Homo sapiens, GI5729991, Length=254, Percent_Identity=45.6692913385827, Blast_Score=222, Evalue=1e-57, Organism=Homo sapiens, GI24430155, Length=254, Percent_Identity=45.6692913385827, Blast_Score=222, Evalue=1e-57, Organism=Homo sapiens, GI89064750, Length=254, Percent_Identity=45.6692913385827, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI4506209, Length=274, Percent_Identity=43.0656934306569, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI195539395, Length=251, Percent_Identity=42.6294820717131, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI21361144, Length=230, Percent_Identity=44.7826086956522, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI300192933, Length=257, Percent_Identity=43.9688715953307, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI156564401, Length=382, Percent_Identity=36.6492146596859, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI5901990, Length=282, Percent_Identity=41.8439716312057, Blast_Score=185, Evalue=2e-46, Organism=Homo sapiens, GI14149767, Length=276, Percent_Identity=42.0289855072464, Blast_Score=180, Evalue=6e-45, Organism=Homo sapiens, GI62177112, Length=276, Percent_Identity=42.0289855072464, Blast_Score=180, Evalue=6e-45, Organism=Homo sapiens, GI7019569, Length=279, Percent_Identity=39.7849462365591, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI4507173, Length=230, Percent_Identity=41.304347826087, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI21327685, Length=226, Percent_Identity=42.0353982300885, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI7657689, Length=226, Percent_Identity=42.0353982300885, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI31742536, Length=295, Percent_Identity=35.2542372881356, Blast_Score=173, Evalue=7e-43, Organism=Homo sapiens, GI112789543, Length=295, Percent_Identity=35.2542372881356, Blast_Score=173, Evalue=7e-43, Organism=Homo sapiens, GI17865802, Length=250, Percent_Identity=42.8, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI226371754, Length=247, Percent_Identity=41.7004048582996, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI310125280, Length=251, Percent_Identity=41.0358565737052, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI310125282, Length=251, Percent_Identity=41.0358565737052, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI31377644, Length=266, Percent_Identity=37.218045112782, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI40806170, Length=319, Percent_Identity=33.5423197492163, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI11875211, Length=319, Percent_Identity=33.5423197492163, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI64084766, Length=232, Percent_Identity=34.4827586206897, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI116292174, Length=276, Percent_Identity=29.3478260869565, Blast_Score=107, Evalue=5e-23, Organism=Homo sapiens, GI40806173, Length=138, Percent_Identity=41.304347826087, Blast_Score=106, Evalue=1e-22, Organism=Homo sapiens, GI11321607, Length=135, Percent_Identity=34.0740740740741, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI40255052, Length=252, Percent_Identity=26.1904761904762, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI1789568, Length=223, Percent_Identity=45.2914798206278, Blast_Score=194, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17532375, Length=723, Percent_Identity=42.7385892116183, Blast_Score=585, Evalue=1e-167, Organism=Caenorhabditis elegans, GI17531535, Length=724, Percent_Identity=42.6795580110497, Blast_Score=574, Evalue=1e-164, Organism=Caenorhabditis elegans, GI17537217, Length=611, Percent_Identity=39.2798690671031, Blast_Score=407, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17508053, Length=524, Percent_Identity=35.8778625954198, Blast_Score=303, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17554786, Length=267, Percent_Identity=45.3183520599251, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI25144278, Length=292, Percent_Identity=42.8082191780822, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI25144281, Length=292, Percent_Identity=42.8082191780822, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17563250, Length=264, Percent_Identity=43.9393939393939, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71987364, Length=263, Percent_Identity=41.06463878327, Blast_Score=215, Evalue=8e-56, Organism=Caenorhabditis elegans, GI71987372, Length=263, Percent_Identity=41.06463878327, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI193206116, Length=291, Percent_Identity=38.4879725085911, Blast_Score=214, Evalue=2e-55, Organism=Caenorhabditis elegans, GI133931034, Length=291, Percent_Identity=38.4879725085911, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI193206114, Length=291, Percent_Identity=38.4879725085911, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17505546, Length=232, Percent_Identity=46.9827586206897, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17563248, Length=274, Percent_Identity=41.2408759124088, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17554784, Length=261, Percent_Identity=45.2107279693487, Blast_Score=210, Evalue=3e-54, Organism=Caenorhabditis elegans, GI25153574, Length=483, Percent_Identity=31.4699792960663, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17508701, Length=265, Percent_Identity=40.377358490566, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193209502, Length=226, Percent_Identity=46.0176991150442, Blast_Score=196, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17562804, Length=493, Percent_Identity=29.4117647058824, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71994521, Length=261, Percent_Identity=44.4444444444444, Blast_Score=188, Evalue=1e-47, Organism=Caenorhabditis elegans, GI133901662, Length=378, Percent_Identity=35.978835978836, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI133901658, Length=378, Percent_Identity=35.978835978836, Blast_Score=180, Evalue=3e-45, Organism=Caenorhabditis elegans, GI25146157, Length=282, Percent_Identity=37.9432624113475, Blast_Score=171, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17508421, Length=272, Percent_Identity=39.7058823529412, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI86561515, Length=231, Percent_Identity=41.991341991342, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI32563584, Length=275, Percent_Identity=39.2727272727273, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17554264, Length=212, Percent_Identity=42.4528301886792, Blast_Score=165, Evalue=9e-41, Organism=Caenorhabditis elegans, GI115534323, Length=233, Percent_Identity=39.9141630901288, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17541226, Length=219, Percent_Identity=37.4429223744292, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17541224, Length=219, Percent_Identity=37.4429223744292, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17560432, Length=268, Percent_Identity=38.0597014925373, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17570397, Length=116, Percent_Identity=37.9310344827586, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI32566590, Length=116, Percent_Identity=37.9310344827586, Blast_Score=76, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71990294, Length=195, Percent_Identity=29.2307692307692, Blast_Score=71, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320077, Length=704, Percent_Identity=45.1704545454545, Blast_Score=609, Evalue=1e-175, Organism=Saccharomyces cerevisiae, GI6323429, Length=552, Percent_Identity=47.1014492753623, Blast_Score=505, Evalue=1e-143, Organism=Saccharomyces cerevisiae, GI6322994, Length=568, Percent_Identity=42.4295774647887, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6324000, Length=567, Percent_Identity=31.0405643738977, Blast_Score=240, Evalue=5e-64, Organism=Saccharomyces cerevisiae, GI6321709, Length=288, Percent_Identity=43.4027777777778, Blast_Score=236, Evalue=7e-63, Organism=Saccharomyces cerevisiae, GI6321390, Length=268, Percent_Identity=45.1492537313433, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6322651, Length=533, Percent_Identity=31.5196998123827, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6320197, Length=273, Percent_Identity=43.5897435897436, Blast_Score=217, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6322704, Length=241, Percent_Identity=45.2282157676349, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6324833, Length=229, Percent_Identity=45.8515283842795, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320602, Length=267, Percent_Identity=44.5692883895131, Blast_Score=207, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6319554, Length=467, Percent_Identity=35.5460385438972, Blast_Score=205, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324691, Length=251, Percent_Identity=40.2390438247012, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323736, Length=248, Percent_Identity=43.9516129032258, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320854, Length=253, Percent_Identity=42.2924901185771, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6325431, Length=230, Percent_Identity=44.7826086956522, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6325281, Length=251, Percent_Identity=40.6374501992032, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6321465, Length=241, Percent_Identity=41.9087136929461, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6325183, Length=287, Percent_Identity=37.2822299651568, Blast_Score=169, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320887, Length=294, Percent_Identity=35.0340136054422, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI9755327, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320583, Length=161, Percent_Identity=29.1925465838509, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076486, Length=586, Percent_Identity=46.9283276450512, Blast_Score=572, Evalue=1e-163, Organism=Drosophila melanogaster, GI17137560, Length=586, Percent_Identity=46.9283276450512, Blast_Score=572, Evalue=1e-163, Organism=Drosophila melanogaster, GI161076488, Length=586, Percent_Identity=46.9283276450512, Blast_Score=572, Evalue=1e-163, Organism=Drosophila melanogaster, GI19921202, Length=586, Percent_Identity=35.4948805460751, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24660075, Length=309, Percent_Identity=45.9546925566343, Blast_Score=273, Evalue=4e-73, Organism=Drosophila melanogaster, GI45552965, Length=309, Percent_Identity=45.9546925566343, Blast_Score=273, Evalue=5e-73, Organism=Drosophila melanogaster, GI281365776, Length=309, Percent_Identity=45.9546925566343, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI21355121, Length=531, Percent_Identity=32.2033898305085, Blast_Score=256, Evalue=6e-68, Organism=Drosophila melanogaster, GI24656825, Length=520, Percent_Identity=30.7692307692308, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24656820, Length=539, Percent_Identity=29.6846011131725, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24651451, Length=266, Percent_Identity=46.6165413533835, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI18860063, Length=264, Percent_Identity=45.8333333333333, Blast_Score=232, Evalue=6e-61, Organism=Drosophila melanogaster, GI19920408, Length=267, Percent_Identity=46.0674157303371, Blast_Score=232, Evalue=9e-61, Organism=Drosophila melanogaster, GI281361487, Length=233, Percent_Identity=46.7811158798283, Blast_Score=228, Evalue=9e-60, Organism=Drosophila melanogaster, GI281363136, Length=552, Percent_Identity=29.5289855072464, Blast_Score=226, Evalue=6e-59, Organism=Drosophila melanogaster, GI78707192, Length=552, Percent_Identity=29.5289855072464, Blast_Score=226, Evalue=6e-59, Organism=Drosophila melanogaster, GI24649446, Length=267, Percent_Identity=43.0711610486891, Blast_Score=220, Evalue=3e-57, Organism=Drosophila melanogaster, GI24652279, Length=205, Percent_Identity=47.3170731707317, Blast_Score=218, Evalue=2e-56, Organism=Drosophila melanogaster, GI24663015, Length=247, Percent_Identity=43.7246963562753, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI17137738, Length=274, Percent_Identity=42.3357664233577, Blast_Score=215, Evalue=8e-56, Organism=Drosophila melanogaster, GI24640100, Length=249, Percent_Identity=42.9718875502008, Blast_Score=213, Evalue=4e-55, Organism=Drosophila melanogaster, GI17738151, Length=265, Percent_Identity=41.1320754716981, Blast_Score=203, Evalue=4e-52, Organism=Drosophila melanogaster, GI24665814, Length=247, Percent_Identity=46.1538461538462, Blast_Score=203, Evalue=4e-52, Organism=Drosophila melanogaster, GI28574878, Length=247, Percent_Identity=46.1538461538462, Blast_Score=203, Evalue=4e-52, Organism=Drosophila melanogaster, GI17864540, Length=382, Percent_Identity=35.6020942408377, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI24658770, Length=241, Percent_Identity=43.9834024896266, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI28573010, Length=377, Percent_Identity=35.5437665782493, Blast_Score=186, Evalue=8e-47, Organism=Drosophila melanogaster, GI24639391, Length=233, Percent_Identity=42.0600858369099, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI24644145, Length=280, Percent_Identity=40.3571428571429, Blast_Score=177, Evalue=3e-44, Organism=Drosophila melanogaster, GI18859657, Length=241, Percent_Identity=42.3236514522822, Blast_Score=175, Evalue=1e-43, Organism=Drosophila melanogaster, GI24581396, Length=290, Percent_Identity=36.551724137931, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI281360146, Length=240, Percent_Identity=40.8333333333333, Blast_Score=173, Evalue=5e-43, Organism=Drosophila melanogaster, GI281360138, Length=240, Percent_Identity=40.8333333333333, Blast_Score=173, Evalue=5e-43, Organism=Drosophila melanogaster, GI281360144, Length=240, Percent_Identity=40.8333333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI281360140, Length=240, Percent_Identity=40.8333333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI20129529, Length=288, Percent_Identity=35.7638888888889, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI281360142, Length=240, Percent_Identity=40.8333333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI21357333, Length=240, Percent_Identity=40.8333333333333, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI281360136, Length=240, Percent_Identity=40.8333333333333, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI24644411, Length=240, Percent_Identity=40.8333333333333, Blast_Score=172, Evalue=7e-43, Organism=Drosophila melanogaster, GI20129423, Length=232, Percent_Identity=37.0689655172414, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI28571849, Length=269, Percent_Identity=35.6877323420074, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI28571847, Length=269, Percent_Identity=35.6877323420074, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI24639486, Length=237, Percent_Identity=38.3966244725738, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI45554047, Length=167, Percent_Identity=40.7185628742515, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI28573181, Length=200, Percent_Identity=29.5, Blast_Score=88, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR003593 - InterPro: IPR005938 - InterPro: IPR003959 - InterPro: IPR003960 - InterPro: IPR003338 - InterPro: IPR004201 - InterPro: IPR001984 - InterPro: IPR015415 [H]
Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 84635; Mature: 84504
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00674 AAA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGDKSTIKLKVAEADQRDVGKGIVRIDEKFREKLGLKPFDVVEIRGGKSTSALIGRPY CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCC PSDSGLDIVRMDGLIRMNAKTSIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKA CCCCCCEEEEECCEEEECCCCCCCHHHHCCCCCHHHHCCEEEHHHHCCCEEECCHHHHHH VFMNRTVSKGDFISTTSLRRSRERETFGKGVMFEDFFQDFFGQGFGQSFGLGEIKLQVVS HHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEE TSPSGIVKITDMTQVELLPEATEITPEQNIPTVMYEDLGGLKDAIGRVREMIELPLKHPE CCCCCEEEEECCCEEEECCCHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHH LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE HHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCHHHHHHH IFEDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC RPEAIDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLADNVNLMDFAQITYGFVG CCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH ADIAALCREAAMSALRRILPKINLNEPEIPGEILDSLQVTREDFENALKDVQPSAIREIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IEVPNIGWDDVGGLGEVKELLKEAVEWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLA HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCCCCCHHHHH KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGA HHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCC STGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDMIDPALLRPGRFDELILVPVPD CCCCHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCCCHHHCCCCCCCCEEEEECCC EGARREIFRVHTENMALAEDVDIEKLVSLTDQYTGADIAAVCKKAGRYALREDLHAKSVR CCCHHHHHEEECCCCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH QKHFLQAIEETGPSVTPDTMKYYQAIRGELRKRKSKEIESPYYI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TEGDKSTIKLKVAEADQRDVGKGIVRIDEKFREKLGLKPFDVVEIRGGKSTSALIGRPY CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCC PSDSGLDIVRMDGLIRMNAKTSIGEYVDIRKADWKEAKSVTLAPVAKGMQIYAPSETLKA CCCCCCEEEEECCEEEECCCCCCCHHHHCCCCCHHHHCCEEEHHHHCCCEEECCHHHHHH VFMNRTVSKGDFISTTSLRRSRERETFGKGVMFEDFFQDFFGQGFGQSFGLGEIKLQVVS HHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEE TSPSGIVKITDMTQVELLPEATEITPEQNIPTVMYEDLGGLKDAIGRVREMIELPLKHPE CCCCCEEEEECCCEEEECCCHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHH LFDRLGIDAPKGVLLHGPPGTGKTMLAKAVANESDAYFISINGPEIMSKYYGESERAIRE HHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCHHHHHHH IFEDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTN HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC RPEAIDIALRRPGRFDREIELRVPDTEGRLEIFQIHTRGMPLADNVNLMDFAQITYGFVG CCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH ADIAALCREAAMSALRRILPKINLNEPEIPGEILDSLQVTREDFENALKDVQPSAIREIL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IEVPNIGWDDVGGLGEVKELLKEAVEWPLKSPESYRNIGVEAPKGVLLYGPPGTGKTLLA HHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEECCCCCCHHHHH KAIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPVRGA HHHHCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCC STGEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDMIDPALLRPGRFDELILVPVPD CCCCHHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCCCCCHHHCCCCCCCCEEEEECCC EGARREIFRVHTENMALAEDVDIEKLVSLTDQYTGADIAAVCKKAGRYALREDLHAKSVR CCCHHHHHEEECCCCCHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHH QKHFLQAIEETGPSVTPDTMKYYQAIRGELRKRKSKEIESPYYI HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]