The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226323

Identifier: 21226323

GI number: 21226323

Start: 300659

End: 302383

Strand: Reverse

Name: 21226323

Synonym: MM_0221

Alternate gene names: NA

Gene position: 302383-300659 (Counterclockwise)

Preceding gene: 21226324

Following gene: 21226322

Centisome position: 7.38

GC content: 49.33

Gene sequence:

>1725_bases
ATGAAAGCACTTATTATAGACGGCTACGTAGACGAACCCGCCTGCCTGGGAGTCCCTCCCTATCTTTCCCCTTATCCAAG
GTATATAGCAGGAGCTCTGAGAGAACGCGGGCTTTCTGAAAATGACATTCATTACCTGACTATTGACACCCTGAGGGAAA
ATATTCCCGGAGCTGGCGAGCTTATTGGGAAGGCAGACCTTGTGGTTATTATTGCCGGCATGACCGTGCCCGGCAAATAT
CTGCGTGCATCTCCCATCTCTCCCGGAGAAATTGAAGCAATTTTCGGGGCTGCAAAGGGAATAAAAGTTATGGGCGGCCC
TATAAGGCTCGGCTTCAGCAGCGAAGGCGGGAGGGCTGCAAAGGGCACGGAAAGCGGCATAAGCCTCGGAGATGCCGTAC
TTGCAAAAATGGACATTGAGGCTTTTATTTACGACCTTTTTGAGGACGGGATCGAAGGGGAAAGAAGTACTGGAAGCTTT
CCTGTCAGGCTGAAAGATCAGGAGTCTATTGAGCACCGTTTCAGGACAACATCCGAGATCGGATGCTGGGGTGTCAGAGG
GGCTTTTTTGATCAGGCAGCACCCGGATTACCCTCACTGCATGTGTGAGCTTGAAACATACAGGGGCTGCGGAAGGAAGG
TTCACTGTTCTTTCTGCACTGAGCCTTTTTATGGGTCTTCGGACTACAGGCCCGTGGAGGATGTTGTTTCTGAAGTTTCC
GCACTTTATTCTTACGGAGCACGCTATTTCAGAATCGGAAGGCAGCCTGACCTCTTTTCCTATCATGGGACAGACGCAGG
TGGACCAGTGCCGAAGCCTGTGCCTGAGGTCCTTGAAAGGCTCTATAAAGGAATAAGGAATTCCGCACCCGGACTTTCCG
TACTCCACATGGACAACGCAAACCCCATTACTCTTGCAACATATCCGGAAGAATCAGAGCAGATTCTGAAGACAATTGTC
AAATTCCATACGCCGGGAGATGTGGCAGCTTTTGGTATGGAGACTGCCGATCCCGCAGTGGTTGCAGCAAATTCCCTCAA
GGCGACCTCAGAAGAAGTCTTTGAAGCGATCAGGCTGGTCAACAGGTTTGGAGCTGTGCGCGGGGCAAACGGGCTTCCGG
AAATTCTTCCGGGCATCAATTTTGTTCATGGCCTTATGGGCGAGACTAAAAAGACTTTCCAGCTCAACTATGCTTTCCTG
CAAAAAGTTCTTGATTCGGGGCTTCTTCTCCGGAGGATCAATATCAGGCAGGTCATGGCATTTCCCGGAACTCCAATGTA
CGGCAGGGACGAAGCTGCAAAGAAGCACAAGAAACTCTTTCTTGATTATAAAGAACGGGTCAGGAAGAATATCGACCTTC
CAATGCTCAGGAAAGTAGTTCCTGAAGGTACTGTACTGAGAGATGTGATGTGTGAGGTTCACGACAGGGAAATCACTTTT
GGAAGGCAGATCGGTTCTTATCCTCTGCTCGTGGGAATCCCTTCCCTCCTTCCTTTGCGGAAATTCACGGATATCACTGT
CACAGGGCACGGTATGCGTTCGATTACCGGAATTCCTTATCCACTGCACATTAACTCTGCTTCCCTGACTCTTATTCGAT
GTCTTCCCGGGATCGGTAAAAAAGCGGCTGCTTCCATAGCTGCCGGAGTTCCCTATTCAAACAGGGATGATTTTCTTAAA
AGAGTAAGCGAGGGAGAAAAGGTCATCGACTTTATTGAAATTTAA

Upstream 100 bases:

>100_bases
TATTTCTGCTTCTGTGTTGTTTTAATTACCCTTAATTTAATATCCAGCTGCGCTCTATACTTCAATCTCCGGTTATCAAA
CAAAGGAAACAGGAACTTAT

Downstream 100 bases:

>100_bases
TGCCCGAAAGAAGGTATGGTACTCTGGACTGTATGGCTCTTCTGGCTGATGTTTCGGTTCTTCAGGCTGATGCCTTTAAT
TTTTGCTCTGGATAATCATA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MKALIIDGYVDEPACLGVPPYLSPYPRYIAGALRERGLSENDIHYLTIDTLRENIPGAGELIGKADLVVIIAGMTVPGKY
LRASPISPGEIEAIFGAAKGIKVMGGPIRLGFSSEGGRAAKGTESGISLGDAVLAKMDIEAFIYDLFEDGIEGERSTGSF
PVRLKDQESIEHRFRTTSEIGCWGVRGAFLIRQHPDYPHCMCELETYRGCGRKVHCSFCTEPFYGSSDYRPVEDVVSEVS
ALYSYGARYFRIGRQPDLFSYHGTDAGGPVPKPVPEVLERLYKGIRNSAPGLSVLHMDNANPITLATYPEESEQILKTIV
KFHTPGDVAAFGMETADPAVVAANSLKATSEEVFEAIRLVNRFGAVRGANGLPEILPGINFVHGLMGETKKTFQLNYAFL
QKVLDSGLLLRRINIRQVMAFPGTPMYGRDEAAKKHKKLFLDYKERVRKNIDLPMLRKVVPEGTVLRDVMCEVHDREITF
GRQIGSYPLLVGIPSLLPLRKFTDITVTGHGMRSITGIPYPLHINSASLTLIRCLPGIGKKAAASIAAGVPYSNRDDFLK
RVSEGEKVIDFIEI

Sequences:

>Translated_574_residues
MKALIIDGYVDEPACLGVPPYLSPYPRYIAGALRERGLSENDIHYLTIDTLRENIPGAGELIGKADLVVIIAGMTVPGKY
LRASPISPGEIEAIFGAAKGIKVMGGPIRLGFSSEGGRAAKGTESGISLGDAVLAKMDIEAFIYDLFEDGIEGERSTGSF
PVRLKDQESIEHRFRTTSEIGCWGVRGAFLIRQHPDYPHCMCELETYRGCGRKVHCSFCTEPFYGSSDYRPVEDVVSEVS
ALYSYGARYFRIGRQPDLFSYHGTDAGGPVPKPVPEVLERLYKGIRNSAPGLSVLHMDNANPITLATYPEESEQILKTIV
KFHTPGDVAAFGMETADPAVVAANSLKATSEEVFEAIRLVNRFGAVRGANGLPEILPGINFVHGLMGETKKTFQLNYAFL
QKVLDSGLLLRRINIRQVMAFPGTPMYGRDEAAKKHKKLFLDYKERVRKNIDLPMLRKVVPEGTVLRDVMCEVHDREITF
GRQIGSYPLLVGIPSLLPLRKFTDITVTGHGMRSITGIPYPLHINSASLTLIRCLPGIGKKAAASIAAGVPYSNRDDFLK
RVSEGEKVIDFIEI
>Mature_574_residues
MKALIIDGYVDEPACLGVPPYLSPYPRYIAGALRERGLSENDIHYLTIDTLRENIPGAGELIGKADLVVIIAGMTVPGKY
LRASPISPGEIEAIFGAAKGIKVMGGPIRLGFSSEGGRAAKGTESGISLGDAVLAKMDIEAFIYDLFEDGIEGERSTGSF
PVRLKDQESIEHRFRTTSEIGCWGVRGAFLIRQHPDYPHCMCELETYRGCGRKVHCSFCTEPFYGSSDYRPVEDVVSEVS
ALYSYGARYFRIGRQPDLFSYHGTDAGGPVPKPVPEVLERLYKGIRNSAPGLSVLHMDNANPITLATYPEESEQILKTIV
KFHTPGDVAAFGMETADPAVVAANSLKATSEEVFEAIRLVNRFGAVRGANGLPEILPGINFVHGLMGETKKTFQLNYAFL
QKVLDSGLLLRRINIRQVMAFPGTPMYGRDEAAKKHKKLFLDYKERVRKNIDLPMLRKVVPEGTVLRDVMCEVHDREITF
GRQIGSYPLLVGIPSLLPLRKFTDITVTGHGMRSITGIPYPLHINSASLTLIRCLPGIGKKAAASIAAGVPYSNRDDFLK
RVSEGEKVIDFIEI

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 63013; Mature: 63013

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALIIDGYVDEPACLGVPPYLSPYPRYIAGALRERGLSENDIHYLTIDTLRENIPGAGE
CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCHHH
LIGKADLVVIIAGMTVPGKYLRASPISPGEIEAIFGAAKGIKVMGGPIRLGFSSEGGRAA
HCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHCCCEEECCEEEEEECCCCCCCC
KGTESGISLGDAVLAKMDIEAFIYDLFEDGIEGERSTGSFPVRLKDQESIEHRFRTTSEI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCCC
GCWGVRGAFLIRQHPDYPHCMCELETYRGCGRKVHCSFCTEPFYGSSDYRPVEDVVSEVS
CCEECCCEEEEECCCCCCHHEEEEHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
ALYSYGARYFRIGRQPDLFSYHGTDAGGPVPKPVPEVLERLYKGIRNSAPGLSVLHMDNA
HHHHCCCCEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
NPITLATYPEESEQILKTIVKFHTPGDVAAFGMETADPAVVAANSLKATSEEVFEAIRLV
CCEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHHH
NRFGAVRGANGLPEILPGINFVHGLMGETKKTFQLNYAFLQKVLDSGLLLRRINIRQVMA
HHHCCCCCCCCCHHHHCCHHHHHHHHCCCCHHEEECHHHHHHHHHCCCEEEECCHHHHEE
FPGTPMYGRDEAAKKHKKLFLDYKERVRKNIDLPMLRKVVPEGTVLRDVMCEVHDREITF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEE
GRQIGSYPLLVGIPSLLPLRKFTDITVTGHGMRSITGIPYPLHINSASLTLIRCLPGIGK
CHHCCCCCCEEECCCHHCHHHCCEEEEECCCCHHCCCCCCEEEECCCHHHHHHHCCCCCH
KAAASIAAGVPYSNRDDFLKRVSEGEKVIDFIEI
HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MKALIIDGYVDEPACLGVPPYLSPYPRYIAGALRERGLSENDIHYLTIDTLRENIPGAGE
CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCHHH
LIGKADLVVIIAGMTVPGKYLRASPISPGEIEAIFGAAKGIKVMGGPIRLGFSSEGGRAA
HCCCCCEEEEEECCCCCCHHHCCCCCCCCHHHHHHHHHCCCEEECCEEEEEECCCCCCCC
KGTESGISLGDAVLAKMDIEAFIYDLFEDGIEGERSTGSFPVRLKDQESIEHRFRTTSEI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCCC
GCWGVRGAFLIRQHPDYPHCMCELETYRGCGRKVHCSFCTEPFYGSSDYRPVEDVVSEVS
CCEECCCEEEEECCCCCCHHEEEEHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
ALYSYGARYFRIGRQPDLFSYHGTDAGGPVPKPVPEVLERLYKGIRNSAPGLSVLHMDNA
HHHHCCCCEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
NPITLATYPEESEQILKTIVKFHTPGDVAAFGMETADPAVVAANSLKATSEEVFEAIRLV
CCEEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCHHHHHHHHHHHH
NRFGAVRGANGLPEILPGINFVHGLMGETKKTFQLNYAFLQKVLDSGLLLRRINIRQVMA
HHHCCCCCCCCCHHHHCCHHHHHHHHCCCCHHEEECHHHHHHHHHCCCEEEECCHHHHEE
FPGTPMYGRDEAAKKHKKLFLDYKERVRKNIDLPMLRKVVPEGTVLRDVMCEVHDREITF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCEEEE
GRQIGSYPLLVGIPSLLPLRKFTDITVTGHGMRSITGIPYPLHINSASLTLIRCLPGIGK
CHHCCCCCCEEECCCHHCHHHCCEEEEECCCCHHCCCCCCEEEECCCHHHHHHHCCCCCH
KAAASIAAGVPYSNRDDFLKRVSEGEKVIDFIEI
HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]