| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226320
Identifier: 21226320
GI number: 21226320
Start: 295621
End: 297837
Strand: Reverse
Name: 21226320
Synonym: MM_0218
Alternate gene names: NA
Gene position: 297837-295621 (Counterclockwise)
Preceding gene: 21226322
Following gene: 21226319
Centisome position: 7.27
GC content: 46.23
Gene sequence:
>2217_bases TTGGCAGGGACAGCAGGTGCAATTGGAGAAGCAGAAAATACAGATACTGTCTCGACCGGGATGACCGAGCCGAGCGTCAG CATTGCCTACAACGAAACCGGTCCTTTCAGGATGGGAGATGTTGTAAAGATCACTGCAACCTTCAGTGAACCTGTATATG ATGCAGTGGCAATAGTTGGGTATAGCGTTCTCACGCCCGATTACTTTAACATGACCAACCTCAGCAACACTGTCTGGTCT TATGACTACGAAGTCCCGGCAGGTATAAATGATGCTGTGAATGTGACGGTCTATGGGATAGGTGGAACCGTAGACTTAAT TGAGAAAACCGATATTCATGCTTTCGTGGTTGATAATGAAGCTCCGAGATTTGACAGAATTCAACCCAGCTCCACATATG TAAATACGGAGTGTGTTGTCTTCGAGTTCAGTGCTTTTGACAAACTGGACAATACAGTTGCCTACTCTCTCTTTATCAAC GGTACTGAAAAGAAATCAGGAATTATAAATTCCAACGGAAGTGTAAAGTACGAGGTTGAAAAATCCGACAACTATTACCA GTGGGAAATCGTACTCGAGGACGATGCCGGAAATATCGGTGGCAGTGGACTCCAGGACCTGTATGTGGACACCAAGGATC CGAGCGTAACTCTTGTTTCTCCAGAAGATGGATTCGTTGACACAACAGGACTTCTGAACTTTAATTTCACATGCCGGGAC ACTTTGTCCGCAAACTGCGGCCTTGACCTTGATTACCAGCTGTATATAAATGGAGAACCTGAACTATTATTGGGTTCCGG TGAAATAGCTTCAGGGGAATATGCAGAAATTCCATATACAGCCCTCTTTGACGGCGCATACAACTGGTCTGTCCTTGTTG AGGACAAAGCAGGAAATAATTGCTCAGGTAAAGTCAGGAACTTCTACGTGAATACTGAAGGGCTTATTGTCGAGCTTATC TCTCCGAATAGTCTTGTTGACGGTGAGCTTGTCACTGCAGAACAGAAGTTTAACTTCAGTGTAATGGGAGGAGCAGGGCT GCCCTTTGGGTACGAACTGCTCATCAATGGCACGGAAGTTAAGAACGGCACTTCAGTTATCGGTGAAGAAGGGATAAGCT TCTGTTCCGTGGATGCAACGGTTGCTGACGGAATGAACATCCCCTGGACCGTGCGCATCACTGACTGTGCAGGCAGAATC TATCAGCCTGATCCGTTTTTCATTTCTGTTGATACCACTGCCCCTGCTCCTGTATCGAACCTGACTGTTGTCGATGCTTT CAGTGATACTACATGGTATTATACATACGATGAGCCCGGGCTTTACGTTTGCTGGGATAAAAATACTGAAGAAGACCTGT ACGATGGAGCAGACGCTTACTATGGGACTCCATATGCGGTTTTCATCAGCGATTTTGAGCCTTCAGGCATTGAAGAAATG GAACTGGCAATGCCTGTAAGCAGCATCTATGACACTATAGACAATAAGGCTCTGTTTATGCACATTGGAATGTATCAAGG AAAACCCCTCGTCTATGGTAAAGACTACTGGGTTGCTGTTATCGCTCTGGATAGAGCTGGCAACTATGATGAATGCTTTA CTATGTGCGGGCCTGTCCAGACATACGAAGATATGGATCTTACACTTGATGCAGGCTGGAACCTGAAATCCGTACCCAGG AGACTGGCTCCTTTCAATGCTGACACATGCTCGGTCTTTGGAGAAGGCAGCACAGTAATTTACTGGGACGGTGCCTGCTG GCAGTTCCCGAAGACTATAGAACCATGTAAGGGTTACTGGGTCTACACTCCGGAAGCCTGTGAAACCAATGTAAAGTTCA AGCCAATGCCTGTCGGCAGTGCAACACCGGATGTTCCTGCTTCTCTCGACCTTTGTGCAGGCTGGCAGATGATAGGACAC ACTTCAACTCAGCCTGCTCACTGGTCTGAGACTCTGGGTTCATTGCAGAGTGATAAGATTATTGCAAACTATAAGTTCTC CAACATAATCACGTATTCTCAAAATGAAGGCTGGGGAGGCACGATTAATCTTGGATTCCTGGATCTATTCGCTCAACCAG AGTCTGAGATCCCATACCCGGTTCAGACTCTTGAGTCCAGCGGTGCTATGGTCCCTGGACAGGGATACTGGATTTTCATG AAAGAAGACGGTACTTACGCATCCATTGAAAATGTAGAACTTTATCAGGCTGAATAA
Upstream 100 bases:
>100_bases TGAAGTTTCAAGATTTAGTTAATCAAAAATGTGCGGAATCTAGGTGCAGAACATGAAACAAAAATTAATATTATTCAGTG CACTGCTGATCATATCCCTT
Downstream 100 bases:
>100_bases GTCCCGGTGAAGGGCCAATTTTAAAAGCAAGTACTTTTCAGCCAGTTGAGGCTGAAAGGTTCTTTTTTCTTTTTTTGCTT GCTAGCAATTGGAGGTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 738; Mature: 737
Protein sequence:
>738_residues MAGTAGAIGEAENTDTVSTGMTEPSVSIAYNETGPFRMGDVVKITATFSEPVYDAVAIVGYSVLTPDYFNMTNLSNTVWS YDYEVPAGINDAVNVTVYGIGGTVDLIEKTDIHAFVVDNEAPRFDRIQPSSTYVNTECVVFEFSAFDKLDNTVAYSLFIN GTEKKSGIINSNGSVKYEVEKSDNYYQWEIVLEDDAGNIGGSGLQDLYVDTKDPSVTLVSPEDGFVDTTGLLNFNFTCRD TLSANCGLDLDYQLYINGEPELLLGSGEIASGEYAEIPYTALFDGAYNWSVLVEDKAGNNCSGKVRNFYVNTEGLIVELI SPNSLVDGELVTAEQKFNFSVMGGAGLPFGYELLINGTEVKNGTSVIGEEGISFCSVDATVADGMNIPWTVRITDCAGRI YQPDPFFISVDTTAPAPVSNLTVVDAFSDTTWYYTYDEPGLYVCWDKNTEEDLYDGADAYYGTPYAVFISDFEPSGIEEM ELAMPVSSIYDTIDNKALFMHIGMYQGKPLVYGKDYWVAVIALDRAGNYDECFTMCGPVQTYEDMDLTLDAGWNLKSVPR RLAPFNADTCSVFGEGSTVIYWDGACWQFPKTIEPCKGYWVYTPEACETNVKFKPMPVGSATPDVPASLDLCAGWQMIGH TSTQPAHWSETLGSLQSDKIIANYKFSNIITYSQNEGWGGTINLGFLDLFAQPESEIPYPVQTLESSGAMVPGQGYWIFM KEDGTYASIENVELYQAE
Sequences:
>Translated_738_residues MAGTAGAIGEAENTDTVSTGMTEPSVSIAYNETGPFRMGDVVKITATFSEPVYDAVAIVGYSVLTPDYFNMTNLSNTVWS YDYEVPAGINDAVNVTVYGIGGTVDLIEKTDIHAFVVDNEAPRFDRIQPSSTYVNTECVVFEFSAFDKLDNTVAYSLFIN GTEKKSGIINSNGSVKYEVEKSDNYYQWEIVLEDDAGNIGGSGLQDLYVDTKDPSVTLVSPEDGFVDTTGLLNFNFTCRD TLSANCGLDLDYQLYINGEPELLLGSGEIASGEYAEIPYTALFDGAYNWSVLVEDKAGNNCSGKVRNFYVNTEGLIVELI SPNSLVDGELVTAEQKFNFSVMGGAGLPFGYELLINGTEVKNGTSVIGEEGISFCSVDATVADGMNIPWTVRITDCAGRI YQPDPFFISVDTTAPAPVSNLTVVDAFSDTTWYYTYDEPGLYVCWDKNTEEDLYDGADAYYGTPYAVFISDFEPSGIEEM ELAMPVSSIYDTIDNKALFMHIGMYQGKPLVYGKDYWVAVIALDRAGNYDECFTMCGPVQTYEDMDLTLDAGWNLKSVPR RLAPFNADTCSVFGEGSTVIYWDGACWQFPKTIEPCKGYWVYTPEACETNVKFKPMPVGSATPDVPASLDLCAGWQMIGH TSTQPAHWSETLGSLQSDKIIANYKFSNIITYSQNEGWGGTINLGFLDLFAQPESEIPYPVQTLESSGAMVPGQGYWIFM KEDGTYASIENVELYQAE >Mature_737_residues AGTAGAIGEAENTDTVSTGMTEPSVSIAYNETGPFRMGDVVKITATFSEPVYDAVAIVGYSVLTPDYFNMTNLSNTVWSY DYEVPAGINDAVNVTVYGIGGTVDLIEKTDIHAFVVDNEAPRFDRIQPSSTYVNTECVVFEFSAFDKLDNTVAYSLFING TEKKSGIINSNGSVKYEVEKSDNYYQWEIVLEDDAGNIGGSGLQDLYVDTKDPSVTLVSPEDGFVDTTGLLNFNFTCRDT LSANCGLDLDYQLYINGEPELLLGSGEIASGEYAEIPYTALFDGAYNWSVLVEDKAGNNCSGKVRNFYVNTEGLIVELIS PNSLVDGELVTAEQKFNFSVMGGAGLPFGYELLINGTEVKNGTSVIGEEGISFCSVDATVADGMNIPWTVRITDCAGRIY QPDPFFISVDTTAPAPVSNLTVVDAFSDTTWYYTYDEPGLYVCWDKNTEEDLYDGADAYYGTPYAVFISDFEPSGIEEME LAMPVSSIYDTIDNKALFMHIGMYQGKPLVYGKDYWVAVIALDRAGNYDECFTMCGPVQTYEDMDLTLDAGWNLKSVPRR LAPFNADTCSVFGEGSTVIYWDGACWQFPKTIEPCKGYWVYTPEACETNVKFKPMPVGSATPDVPASLDLCAGWQMIGHT STQPAHWSETLGSLQSDKIIANYKFSNIITYSQNEGWGGTINLGFLDLFAQPESEIPYPVQTLESSGAMVPGQGYWIFMK EDGTYASIENVELYQAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80879; Mature: 80748
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTAGAIGEAENTDTVSTGMTEPSVSIAYNETGPFRMGDVVKITATFSEPVYDAVAIVG CCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCEECCCEEEEEEECCCCHHHHHHHHH YSVLTPDYFNMTNLSNTVWSYDYEVPAGINDAVNVTVYGIGGTVDLIEKTDIHAFVVDNE HEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCEEEEEECCC APRFDRIQPSSTYVNTECVVFEFSAFDKLDNTVAYSLFINGTEKKSGIINSNGSVKYEVE CCCCCCCCCCCEEEEEEEEEEEECHHCCCCCEEEEEEEEECCCCCCCEEECCCCEEEEEE KSDNYYQWEIVLEDDAGNIGGSGLQDLYVDTKDPSVTLVSPEDGFVDTTGLLNFNFTCRD CCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEECCEEEEEEEEECC TLSANCGLDLDYQLYINGEPELLLGSGEIASGEYAEIPYTALFDGAYNWSVLVEDKAGNN CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC CSGKVRNFYVNTEGLIVELISPNSLVDGELVTAEQKFNFSVMGGAGLPFGYELLINGTEV CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEECCCC KNGTSVIGEEGISFCSVDATVADGMNIPWTVRITDCAGRIYQPDPFFISVDTTAPAPVSN CCCCEEHHCCCCEEEEECCHHHCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCCCCC LTVVDAFSDTTWYYTYDEPGLYVCWDKNTEEDLYDGADAYYGTPYAVFISDFEPSGIEEM EEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCE ELAMPVSSIYDTIDNKALFMHIGMYQGKPLVYGKDYWVAVIALDRAGNYDECFTMCGPVQ EECCCHHHHHHHHCCCEEEEEEEEECCCEEEEECCEEEEEEEEECCCCHHHHHHHCCCCC TYEDMDLTLDAGWNLKSVPRRLAPFNADTCSVFGEGSTVIYWDGACWQFPKTIEPCKGYW CCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEE VYTPEACETNVKFKPMPVGSATPDVPASLDLCAGWQMIGHTSTQPAHWSETLGSLQSDKI EECCHHHCCCCEEEEECCCCCCCCCCCCEEHCCCEEEECCCCCCCCHHHHHHCCCCCCEE IANYKFSNIITYSQNEGWGGTINLGFLDLFAQPESEIPYPVQTLESSGAMVPGQGYWIFM EEEEEECEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCEEEEE KEDGTYASIENVELYQAE ECCCCEEEECCEEEEECC >Mature Secondary Structure AGTAGAIGEAENTDTVSTGMTEPSVSIAYNETGPFRMGDVVKITATFSEPVYDAVAIVG CCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCEECCCEEEEEEECCCCHHHHHHHHH YSVLTPDYFNMTNLSNTVWSYDYEVPAGINDAVNVTVYGIGGTVDLIEKTDIHAFVVDNE HEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCEEEEEECCC APRFDRIQPSSTYVNTECVVFEFSAFDKLDNTVAYSLFINGTEKKSGIINSNGSVKYEVE CCCCCCCCCCCEEEEEEEEEEEECHHCCCCCEEEEEEEEECCCCCCCEEECCCCEEEEEE KSDNYYQWEIVLEDDAGNIGGSGLQDLYVDTKDPSVTLVSPEDGFVDTTGLLNFNFTCRD CCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCEECCEEEEEEEEECC TLSANCGLDLDYQLYINGEPELLLGSGEIASGEYAEIPYTALFDGAYNWSVLVEDKAGNN CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCC CSGKVRNFYVNTEGLIVELISPNSLVDGELVTAEQKFNFSVMGGAGLPFGYELLINGTEV CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEECCCC KNGTSVIGEEGISFCSVDATVADGMNIPWTVRITDCAGRIYQPDPFFISVDTTAPAPVSN CCCCEEHHCCCCEEEEECCHHHCCCCCCEEEEEECCCCCEECCCCEEEEECCCCCCCCCC LTVVDAFSDTTWYYTYDEPGLYVCWDKNTEEDLYDGADAYYGTPYAVFISDFEPSGIEEM EEEEEECCCCEEEEEECCCCEEEEECCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCE ELAMPVSSIYDTIDNKALFMHIGMYQGKPLVYGKDYWVAVIALDRAGNYDECFTMCGPVQ EECCCHHHHHHHHCCCEEEEEEEEECCCEEEEECCEEEEEEEEECCCCHHHHHHHCCCCC TYEDMDLTLDAGWNLKSVPRRLAPFNADTCSVFGEGSTVIYWDGACWQFPKTIEPCKGYW CCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEE VYTPEACETNVKFKPMPVGSATPDVPASLDLCAGWQMIGHTSTQPAHWSETLGSLQSDKI EECCHHHCCCCEEEEECCCCCCCCCCCCEEHCCCEEEECCCCCCCCHHHHHHCCCCCCEE IANYKFSNIITYSQNEGWGGTINLGFLDLFAQPESEIPYPVQTLESSGAMVPGQGYWIFM EEEEEECEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCEEEEE KEDGTYASIENVELYQAE ECCCCEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA