The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226253

Identifier: 21226253

GI number: 21226253

Start: 189183

End: 191069

Strand: Reverse

Name: 21226253

Synonym: MM_0151

Alternate gene names: NA

Gene position: 191069-189183 (Counterclockwise)

Preceding gene: 21226254

Following gene: 21226245

Centisome position: 4.66

GC content: 40.38

Gene sequence:

>1887_bases
ATGTTCAACAACCCTACTGACAGAATTAACTTTATGATTAGTGCAAACAGCGAGTTACCGGAAGATAAGAGATACTCTGA
CGAAGAGATTGAAATGTATTCAGAAGCAATATCAGAAGCACTTGAAGTGTGTGACCCTGACTTCAACGAAGATGCGGTAA
CTGAACTTATGCACAGAACTGAAGTACCTGCTACAAAGAATGACAGGCTTGTAGTTGCAGTTAAGTTTGCTAAGGATCAC
CTTTCTAGGTTTGATATAGAAGAGGTAAGGCTGTTTGTAAACGTAGATATGAGAGCTTATTTCTCACTTACAAAAGAAGA
CCGCTCAACTATAATTGCAAAGATAGAAAACGAGAAGAGAAAAGCAGGAAGCGCAAAAACACCCAGCAAAAAGAGTAGAG
ACAGTGATTCCGAAAACGGTGGAAGCAAAACAGCTATACTGTGCAACGATCTTGCTGACTCATATCTTGAATCATATCCT
ACAGTTACTCTTGAAGACGGAGTGACCAGAACATACCACAATGGAGTATATCAGGAGTGCAGAAACAAGTACATCATCAA
CAATAGGATGATGGACATTGCGGAAGATATGGGAATAGTCCTGACCCCTAAGCAAATACAGGATGCTCTTGAGATAGTGA
GAAACAAAACACCATTCACTGAGTCAAAAACGCCAATTAATCTTATTCCTGTAGGAAATGGAGTACTTGACATAAATACT
ATGGAGCTTAGTGATTACTCCCCAGAGACTGTACTGCTTACTAAATTCCCGAGAGACTACAATCCAAGTGCCGCAACACC
TTCAAAATTTATGGAAATGCTAAATACAACATTTGATGGAAGCGAAGAGCAAATAAAGCTTGTTCAGGAAATGTTTGGAT
ACTGCTTCCTTAGAAGCTACTTCTTAGAGGTAATCTTCTTCCTGATAGGAAATGGTAGGAATGGTAAGACAACACTCCTT
AACATTCTTGGTGCTCTTCTTGGAGGAGAGGAGTCTGGACACATTTCAAATCTGTCATTCAAAGACCTGTCAGAACCTAA
GAACGAGAACATGTTGTGTGACCTTTACGGAAGGTATGCCAACATCTGCGGTGACACTGGAAAGCACAAGATTAAGGAGA
CAGACTACATTAAGAAAGTAACAGGTAACGACTTTGTTAGAGCCAGAAAACTGTACAAGGACAGCTTTAACTTCAAGAGT
TTTGCCAAAGTAATACTGGCCTTTAACCAGCTTCCAGAAGTTGATGACTTCTCTGACGGATTCAAGAGAAGGATCAGGAT
CATAGAATTCAACCATAAGTTCGAAGATGGTGCTGGTGCTAACAAGAACATTGAAGCTGAGATTACAGGTGATGAAGAAG
AGATGGAAGGCATATTCCTGTGGGCAATGGAAGGTCTAAAGAGAATCCTTGAAAATAACAGCTTCTCAGACAAGAGATCA
ATAGTAAGCAGAGGCATGGAATACGCAAGGAAAAGCAATCCAATGCACTACTTCGTTAGAGAGTGTATTGTTGAAAGCCC
TGGACACTTCGTTAATAAGGCAGATCTTATAGAAAAGTATGTAGAGTATGCTGAGTACAACAAAATGCCACAGCTAACCC
CTCAAGCATTCAAGAAAGGTCTAATAGCTGAATGCACTGACATAAGCATAAACACATTCGAGAAGAGAGATCAGACAAAG
ACAGGTAGACCTTTTGGGTTCATGCACATTGATATTGACCTAGAATCATGGAAGAAGCACACAGGTAAGGCTGATAACGC
CTCTCCTGTTGAACCTAAAGAAGACTCTAAACAAACACAGTTCAAGGAATTGGAAATACAGATCGCAACAACTGATGAAG
AGATTAGAAAGGTTGCGGAAGACATGGCAAGTACAGCTTCTGCTTGA

Upstream 100 bases:

>100_bases
TACTGCATGCGTTTGTCTGTTTTCTCTTTTTCAAAACCATGATTTCAGAAAAGGTGATTGAAAAATGGATAACTTCCCAG
TAATAATGACAGCGGCACAG

Downstream 100 bases:

>100_bases
TTTCAGCGCAACACCTGCCACAGAAATGTGGCTTACTTTCCAATTTTTTGAATAAATAAACTTTTTTTAACATTTAAACT
GTTTACTTCTTTACTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase; Primase; Phage Primase; Phage/Plasmid Primase; DNA Primase/Helicase; Phage DNA Polymerase; Nucleoside Triphosphatase D5 Family; Phage/Plasmid DNA Primase; Phage-Associated Protein; ATPase-Like Protein; RepA Protein; Phage/Plasmid Primase P4-Like; Phage Associated DNA Primase; Phage DNA Primase; Replication Protein; P4-Specific DNA Primase; Phage Replication Protein; Helicase-Like Protein; DNA Primase Small Subunit; Phage/Plasmid Primase P4-Like Protein; Prophage; ATPase; Prophage Lsa1 DNA Primase; Phage-Like Protein; Bacteriophage-Related Protein; D5 N-Terminal Domain Family Protein; Plasmid/Phage Primase; Phage Associated Protein; Phage/Plasmid Primase P4 C-Terminal Protein; Bacteriophage Protein; Primase Superantigen-Encoding Pathogenicity Islands SaPI; DNA-Polymerase Or DNA-Primase; DNA Primase Domain-Containing Protein; DNA Primase Phage/Plasmid

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MFNNPTDRINFMISANSELPEDKRYSDEEIEMYSEAISEALEVCDPDFNEDAVTELMHRTEVPATKNDRLVVAVKFAKDH
LSRFDIEEVRLFVNVDMRAYFSLTKEDRSTIIAKIENEKRKAGSAKTPSKKSRDSDSENGGSKTAILCNDLADSYLESYP
TVTLEDGVTRTYHNGVYQECRNKYIINNRMMDIAEDMGIVLTPKQIQDALEIVRNKTPFTESKTPINLIPVGNGVLDINT
MELSDYSPETVLLTKFPRDYNPSAATPSKFMEMLNTTFDGSEEQIKLVQEMFGYCFLRSYFLEVIFFLIGNGRNGKTTLL
NILGALLGGEESGHISNLSFKDLSEPKNENMLCDLYGRYANICGDTGKHKIKETDYIKKVTGNDFVRARKLYKDSFNFKS
FAKVILAFNQLPEVDDFSDGFKRRIRIIEFNHKFEDGAGANKNIEAEITGDEEEMEGIFLWAMEGLKRILENNSFSDKRS
IVSRGMEYARKSNPMHYFVRECIVESPGHFVNKADLIEKYVEYAEYNKMPQLTPQAFKKGLIAECTDISINTFEKRDQTK
TGRPFGFMHIDIDLESWKKHTGKADNASPVEPKEDSKQTQFKELEIQIATTDEEIRKVAEDMASTASA

Sequences:

>Translated_628_residues
MFNNPTDRINFMISANSELPEDKRYSDEEIEMYSEAISEALEVCDPDFNEDAVTELMHRTEVPATKNDRLVVAVKFAKDH
LSRFDIEEVRLFVNVDMRAYFSLTKEDRSTIIAKIENEKRKAGSAKTPSKKSRDSDSENGGSKTAILCNDLADSYLESYP
TVTLEDGVTRTYHNGVYQECRNKYIINNRMMDIAEDMGIVLTPKQIQDALEIVRNKTPFTESKTPINLIPVGNGVLDINT
MELSDYSPETVLLTKFPRDYNPSAATPSKFMEMLNTTFDGSEEQIKLVQEMFGYCFLRSYFLEVIFFLIGNGRNGKTTLL
NILGALLGGEESGHISNLSFKDLSEPKNENMLCDLYGRYANICGDTGKHKIKETDYIKKVTGNDFVRARKLYKDSFNFKS
FAKVILAFNQLPEVDDFSDGFKRRIRIIEFNHKFEDGAGANKNIEAEITGDEEEMEGIFLWAMEGLKRILENNSFSDKRS
IVSRGMEYARKSNPMHYFVRECIVESPGHFVNKADLIEKYVEYAEYNKMPQLTPQAFKKGLIAECTDISINTFEKRDQTK
TGRPFGFMHIDIDLESWKKHTGKADNASPVEPKEDSKQTQFKELEIQIATTDEEIRKVAEDMASTASA
>Mature_628_residues
MFNNPTDRINFMISANSELPEDKRYSDEEIEMYSEAISEALEVCDPDFNEDAVTELMHRTEVPATKNDRLVVAVKFAKDH
LSRFDIEEVRLFVNVDMRAYFSLTKEDRSTIIAKIENEKRKAGSAKTPSKKSRDSDSENGGSKTAILCNDLADSYLESYP
TVTLEDGVTRTYHNGVYQECRNKYIINNRMMDIAEDMGIVLTPKQIQDALEIVRNKTPFTESKTPINLIPVGNGVLDINT
MELSDYSPETVLLTKFPRDYNPSAATPSKFMEMLNTTFDGSEEQIKLVQEMFGYCFLRSYFLEVIFFLIGNGRNGKTTLL
NILGALLGGEESGHISNLSFKDLSEPKNENMLCDLYGRYANICGDTGKHKIKETDYIKKVTGNDFVRARKLYKDSFNFKS
FAKVILAFNQLPEVDDFSDGFKRRIRIIEFNHKFEDGAGANKNIEAEITGDEEEMEGIFLWAMEGLKRILENNSFSDKRS
IVSRGMEYARKSNPMHYFVRECIVESPGHFVNKADLIEKYVEYAEYNKMPQLTPQAFKKGLIAECTDISINTFEKRDQTK
TGRPFGFMHIDIDLESWKKHTGKADNASPVEPKEDSKQTQFKELEIQIATTDEEIRKVAEDMASTASA

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71588; Mature: 71588

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNPTDRINFMISANSELPEDKRYSDEEIEMYSEAISEALEVCDPDFNEDAVTELMHRT
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EVPATKNDRLVVAVKFAKDHLSRFDIEEVRLFVNVDMRAYFSLTKEDRSTIIAKIENEKR
CCCCCCCCCEEEEEEEHHHHHHHCCHHHEEEEEEECHHHHHHHHHHHHHEEEEEECCHHH
KAGSAKTPSKKSRDSDSENGGSKTAILCNDLADSYLESYPTVTLEDGVTRTYHNGVYQEC
HCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH
RNKYIINNRMMDIAEDMGIVLTPKQIQDALEIVRNKTPFTESKTPINLIPVGNGVLDINT
CCCEEECCHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEE
MELSDYSPETVLLTKFPRDYNPSAATPSKFMEMLNTTFDGSEEQIKLVQEMFGYCFLRSY
EEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FLEVIFFLIGNGRNGKTTLLNILGALLGGEESGHISNLSFKDLSEPKNENMLCDLYGRYA
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHH
NICGDTGKHKIKETDYIKKVTGNDFVRARKLYKDSFNFKSFAKVILAFNQLPEVDDFSDG
HHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHH
FKRRIRIIEFNHKFEDGAGANKNIEAEITGDEEEMEGIFLWAMEGLKRILENNSFSDKRS
HHHEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IVSRGMEYARKSNPMHYFVRECIVESPGHFVNKADLIEKYVEYAEYNKMPQLTPQAFKKG
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCC
LIAECTDISINTFEKRDQTKTGRPFGFMHIDIDLESWKKHTGKADNASPVEPKEDSKQTQ
CHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHC
FKELEIQIATTDEEIRKVAEDMASTASA
EEEEEEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNNPTDRINFMISANSELPEDKRYSDEEIEMYSEAISEALEVCDPDFNEDAVTELMHRT
CCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EVPATKNDRLVVAVKFAKDHLSRFDIEEVRLFVNVDMRAYFSLTKEDRSTIIAKIENEKR
CCCCCCCCCEEEEEEEHHHHHHHCCHHHEEEEEEECHHHHHHHHHHHHHEEEEEECCHHH
KAGSAKTPSKKSRDSDSENGGSKTAILCNDLADSYLESYPTVTLEDGVTRTYHNGVYQEC
HCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHH
RNKYIINNRMMDIAEDMGIVLTPKQIQDALEIVRNKTPFTESKTPINLIPVGNGVLDINT
CCCEEECCHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEE
MELSDYSPETVLLTKFPRDYNPSAATPSKFMEMLNTTFDGSEEQIKLVQEMFGYCFLRSY
EEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
FLEVIFFLIGNGRNGKTTLLNILGALLGGEESGHISNLSFKDLSEPKNENMLCDLYGRYA
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEHHHHHHHH
NICGDTGKHKIKETDYIKKVTGNDFVRARKLYKDSFNFKSFAKVILAFNQLPEVDDFSDG
HHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHH
FKRRIRIIEFNHKFEDGAGANKNIEAEITGDEEEMEGIFLWAMEGLKRILENNSFSDKRS
HHHEEEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
IVSRGMEYARKSNPMHYFVRECIVESPGHFVNKADLIEKYVEYAEYNKMPQLTPQAFKKG
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCC
LIAECTDISINTFEKRDQTKTGRPFGFMHIDIDLESWKKHTGKADNASPVEPKEDSKQTQ
CHHCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHC
FKELEIQIATTDEEIRKVAEDMASTASA
EEEEEEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA