| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226245
Identifier: 21226245
GI number: 21226245
Start: 177870
End: 178181
Strand: Reverse
Name: 21226245
Synonym: MM_0143
Alternate gene names: NA
Gene position: 178181-177870 (Counterclockwise)
Preceding gene: 21226253
Following gene: 21226242
Centisome position: 4.35
GC content: 44.23
Gene sequence:
>312_bases ATGAATCAAAATCCGTATGAGATCTTCCAGAACGAATGCCCGGAAGTTGCAGCACGTTTTAACGACCTCATTGAAGCGCA AAAGGCTTTAAAAGGTCTCGATGCTAAATCAAAGCAGCTAATCAACATCGCTATCCAGACAGCTAACCGAAACCCAAGAG GTGTGCAGATGCATGCCATGATGGCAAAGAACGAAGGCGCAACTCGCGATGAAATTGTCGGCGCTGTGGTATTAAACCTT CATCATTCCGGTTTTGCATCAGTTCTTGACTGCCTGCCTGCTGCAATAAAAGGTTTTGAAGGTAAATTTTAA
Upstream 100 bases:
>100_bases AAGTAGAAACATTCCAAGTATCTATAAAAACATAAAATCTAATTTACCTGAGATCTGCTAAATATAAAAAATGAACCAGA TTCTTCAAAAGGTGACATCT
Downstream 100 bases:
>100_bases ATGTTATTATTATTATTATTATTATTATTATTATTACTATTACTATTACTATTATTACAATATTACAATATTACAATATT ATTACTGTCATTATTATTCC
Product: 4-carboxymuconolactone decarboxylase
Products: 4,5-dihydro-5-oxofuran-2-acetate; CO2
Alternate protein names: Carboxymuconolactone Decarboxylase Family Protein; 4-Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MNQNPYEIFQNECPEVAARFNDLIEAQKALKGLDAKSKQLINIAIQTANRNPRGVQMHAMMAKNEGATRDEIVGAVVLNL HHSGFASVLDCLPAAIKGFEGKF
Sequences:
>Translated_103_residues MNQNPYEIFQNECPEVAARFNDLIEAQKALKGLDAKSKQLINIAIQTANRNPRGVQMHAMMAKNEGATRDEIVGAVVLNL HHSGFASVLDCLPAAIKGFEGKF >Mature_103_residues MNQNPYEIFQNECPEVAARFNDLIEAQKALKGLDAKSKQLINIAIQTANRNPRGVQMHAMMAKNEGATRDEIVGAVVLNL HHSGFASVLDCLPAAIKGFEGKF
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.1.44
Molecular weight: Translated: 11280; Mature: 11280
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNPYEIFQNECPEVAARFNDLIEAQKALKGLDAKSKQLINIAIQTANRNPRGVQMHAM CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEECCCCCCCEEHHHH MAKNEGATRDEIVGAVVLNLHHSGFASVLDCLPAAIKGFEGKF HHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNQNPYEIFQNECPEVAARFNDLIEAQKALKGLDAKSKQLINIAIQTANRNPRGVQMHAM CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEECCCCCCCEEHHHH MAKNEGATRDEIVGAVVLNLHHSGFASVLDCLPAAIKGFEGKF HHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate
Specific reaction: 2-carboxy-2,5-dihydro-5-oxofuran-2-acetate = 4,5-dihydro-5-oxofuran-2-acetate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA