| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226238
Identifier: 21226238
GI number: 21226238
Start: 169165
End: 169773
Strand: Reverse
Name: 21226238
Synonym: MM_0136
Alternate gene names: NA
Gene position: 169773-169165 (Counterclockwise)
Preceding gene: 21226240
Following gene: 21226237
Centisome position: 4.14
GC content: 40.23
Gene sequence:
>609_bases GTGGATGCGGGACACCCTGGCAAAATCAAGAACCTCCAAATTGCTCTTGAAAGAAACCACATTAATTTTACCGATATAGT TCTGGTAGTCCTCACCCACACTCATTATGATCATGTGAGTTGCCTTGCCGAAATAAAAGAAAAGAGCGGGGCAAAAATTC TTGTTCATGCAGAGGAAAAAGAATGCCTGGAAAAGGGTACAACTCCCTTTCCTGAGGGCACTTTATGGTTCTCAAGAATC ATTTCCCGGATAGGAAACACCTTCATGTTATCAAAGTCAAGATACAAGCCTGTGAGTTCTGATATTGTTGTAAGTGATGA ATATGATCTGGACAGGTATATCCCTCACGCAAAAATCATCTCAACTCCAGGCCATACTGCAGGCTCTATCAGTCTTGTTA TTAAAAATGAGGTTGCATTCGTTGGTGATACTCTTTTTAATGTCATCCCAGGGACAATTTTCCCTCCTTTTGCAGATGAT GTACCTAAACTTTTAAAGAGCTGGGAGGTATTGATTGATTCGGGGTGCAGGACATTTTATCCAGGTCATGGCAGACCCTT AACTTTCAAGAAATTAAAAGATTCCTATGGGAAAATGATTAAAAAATGA
Upstream 100 bases:
>100_bases CACTAAAAGACTGGATACTGATAAGCCTTACAGTATTATTACTGTCCCAATGGGTCATTCAAACTCTTACCTTATAGTTA CAGGAGGTTAGGGAATTCTT
Downstream 100 bases:
>100_bases TAACTGGCACCCTTATTTATATTTGCATTTATGGCTTAATTAACCGGGCAGTGTATTAGAAATTAAAAAAACGAAGCCTT TTCTTCTTACCCTTTAGATT
Product: Zn-dependent hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase; Beta-Lactamase-Like; Metallo-Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Zinc Dependent Hydrolase/Metallo-Beta-Lactamase; Zn-Dependent Hydrolase Glyoxylase; Hydrolase; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MDAGHPGKIKNLQIALERNHINFTDIVLVVLTHTHYDHVSCLAEIKEKSGAKILVHAEEKECLEKGTTPFPEGTLWFSRI ISRIGNTFMLSKSRYKPVSSDIVVSDEYDLDRYIPHAKIISTPGHTAGSISLVIKNEVAFVGDTLFNVIPGTIFPPFADD VPKLLKSWEVLIDSGCRTFYPGHGRPLTFKKLKDSYGKMIKK
Sequences:
>Translated_202_residues MDAGHPGKIKNLQIALERNHINFTDIVLVVLTHTHYDHVSCLAEIKEKSGAKILVHAEEKECLEKGTTPFPEGTLWFSRI ISRIGNTFMLSKSRYKPVSSDIVVSDEYDLDRYIPHAKIISTPGHTAGSISLVIKNEVAFVGDTLFNVIPGTIFPPFADD VPKLLKSWEVLIDSGCRTFYPGHGRPLTFKKLKDSYGKMIKK >Mature_202_residues MDAGHPGKIKNLQIALERNHINFTDIVLVVLTHTHYDHVSCLAEIKEKSGAKILVHAEEKECLEKGTTPFPEGTLWFSRI ISRIGNTFMLSKSRYKPVSSDIVVSDEYDLDRYIPHAKIISTPGHTAGSISLVIKNEVAFVGDTLFNVIPGTIFPPFADD VPKLLKSWEVLIDSGCRTFYPGHGRPLTFKKLKDSYGKMIKK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22607; Mature: 22607
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAGHPGKIKNLQIALERNHINFTDIVLVVLTHTHYDHVSCLAEIKEKSGAKILVHAEEK CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHH ECLEKGTTPFPEGTLWFSRIISRIGNTFMLSKSRYKPVSSDIVVSDEYDLDRYIPHAKII HHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCHHHHCCCCEEE STPGHTAGSISLVIKNEVAFVGDTLFNVIPGTIFPPFADDVPKLLKSWEVLIDSGCRTFY CCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PGHGRPLTFKKLKDSYGKMIKK CCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MDAGHPGKIKNLQIALERNHINFTDIVLVVLTHTHYDHVSCLAEIKEKSGAKILVHAEEK CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHH ECLEKGTTPFPEGTLWFSRIISRIGNTFMLSKSRYKPVSSDIVVSDEYDLDRYIPHAKII HHHHCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCHHHHCCCCEEE STPGHTAGSISLVIKNEVAFVGDTLFNVIPGTIFPPFADDVPKLLKSWEVLIDSGCRTFY CCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PGHGRPLTFKKLKDSYGKMIKK CCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA