| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226232
Identifier: 21226232
GI number: 21226232
Start: 161975
End: 162211
Strand: Reverse
Name: 21226232
Synonym: MM_0130
Alternate gene names: NA
Gene position: 162211-161975 (Counterclockwise)
Preceding gene: 21226237
Following gene: 21226230
Centisome position: 3.96
GC content: 46.84
Gene sequence:
>237_bases GTGCAGCAGGAAAGGCGTTATTTCACCGAATGCGACCTGAACGAGGATGAAGCCGGAACTCCTCACGACCCCGGAACAAA GAGAAAGGTCAGGCTTGCAAATATCCTGATCACTTTATTTGTTCTCGGGCTTGTAGTTTACTCTTATTTTACTCTCCAGT TTATATGGGGGGTGGTCGTCGGGCTGATGGTTCTCCTTTATGTTCACATGCTGCTGTTTTCCGGAAAAAACCTTTGA
Upstream 100 bases:
>100_bases CGGAATCCTGCTCGCGGCTATCTTTTTCTATACCCTTTACATAGGTCAGCTTCTCTGGGGTATAATCATTGATATCCTTA TCCTGAGGATTTACTTCCTT
Downstream 100 bases:
>100_bases AGGACTTTCAAAGCCCTTTCAGTCTTTCCTCTGTCAGGGCGATGGCTTCTTTAACCTTCTCATTTTCAGGCTGCTGGTCC AGCAGACTTTCCTGCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MQQERRYFTECDLNEDEAGTPHDPGTKRKVRLANILITLFVLGLVVYSYFTLQFIWGVVVGLMVLLYVHMLLFSGKNL
Sequences:
>Translated_78_residues MQQERRYFTECDLNEDEAGTPHDPGTKRKVRLANILITLFVLGLVVYSYFTLQFIWGVVVGLMVLLYVHMLLFSGKNL >Mature_78_residues MQQERRYFTECDLNEDEAGTPHDPGTKRKVRLANILITLFVLGLVVYSYFTLQFIWGVVVGLMVLLYVHMLLFSGKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9023; Mature: 9023
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQERRYFTECDLNEDEAGTPHDPGTKRKVRLANILITLFVLGLVVYSYFTLQFIWGVVV CCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMVLLYVHMLLFSGKNL HHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQQERRYFTECDLNEDEAGTPHDPGTKRKVRLANILITLFVLGLVVYSYFTLQFIWGVVV CCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLMVLLYVHMLLFSGKNL HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA