| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226221
Identifier: 21226221
GI number: 21226221
Start: 148702
End: 149466
Strand: Reverse
Name: 21226221
Synonym: MM_0119
Alternate gene names: NA
Gene position: 149466-148702 (Counterclockwise)
Preceding gene: 21226222
Following gene: 21226220
Centisome position: 3.65
GC content: 44.31
Gene sequence:
>765_bases GTGAACTTGGAGCAGATATTCCAGAACGTTATTATCAATCGGCAGGAAATAAATTCAATTGAGTTTGAAAAAGAAAATAT TGAAATCCCTCTTTATCCGGGCGGAGAACAGACCTTTGAAATCCTTATCACAAACTACGGATCCCCAACACATATTCACC TTTCCGTCAGTGACGAGCTTAAAGGGCAGATTACATTTTTGCGGGACAACCCTTATGTCCTTCAGAAAGAATATGTTTCT GCAGTCGCAAGAATTCCGCAGGACGGCAGGGTACTTACAAATGGTCAGATTTTTATAACCGCAGGTTACGGCTCAAAGAA GAAAAGTTTTCCTGTCCAGCTCGGAAAAGTTGAGGCAAAGACTCAGGAGCCCCAAAAAGATGAGCTTGATAAATGGGAAG AAGAGAGCGAAGAGTTAAGACCCTCAAGACCTTTCGTAGCAGAGCCAGCAAAAAAGGCTTCCCGCTCCCGGATGTCAGGA GGAAGCGGATTTGGCGGGATATCAGCTTCAGCTTTCAAGAACTTCAGGGGAGGATTCCCGGCTTCTTCAGGAAAACGGAC CAGAAAAGGCACCGGGGAAAACGAAAGGTTTCCCCTTATTCTGGCTCTGGGAGGATTTTTACTTCTTGTATCTTCATTCC TTCTTTATTTCCTGCTGCCAGAGAGCCTCCAGTTCGATGTAAGTTTTACCCAATCCCTTTTGTTCTCGATTCTGTTTGTG ACCTGTACGACCTACATCCTGCTAAAGTTTATGGACGAAATTTAA
Upstream 100 bases:
>100_bases TATCCGGAACCCTCTACTGCCCTGTCTGTAAAGAGCATTACCCCATAGACGAAGGGATTCCGAACTTGCTTCCTGCAGAC CTCAGGAACTGATGTGAGGG
Downstream 100 bases:
>100_bases GTGCCGTTTACGGGCTTAATGTTCCGCGGTTCAGCTAATGTAAATAGCTTGAAGTAAAACCCTGTGAAACAAATTCTGGA TTAAGCAAAAGGTTTCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNLEQIFQNVIINRQEINSIEFEKENIEIPLYPGGEQTFEILITNYGSPTHIHLSVSDELKGQITFLRDNPYVLQKEYVS AVARIPQDGRVLTNGQIFITAGYGSKKKSFPVQLGKVEAKTQEPQKDELDKWEEESEELRPSRPFVAEPAKKASRSRMSG GSGFGGISASAFKNFRGGFPASSGKRTRKGTGENERFPLILALGGFLLLVSSFLLYFLLPESLQFDVSFTQSLLFSILFV TCTTYILLKFMDEI
Sequences:
>Translated_254_residues MNLEQIFQNVIINRQEINSIEFEKENIEIPLYPGGEQTFEILITNYGSPTHIHLSVSDELKGQITFLRDNPYVLQKEYVS AVARIPQDGRVLTNGQIFITAGYGSKKKSFPVQLGKVEAKTQEPQKDELDKWEEESEELRPSRPFVAEPAKKASRSRMSG GSGFGGISASAFKNFRGGFPASSGKRTRKGTGENERFPLILALGGFLLLVSSFLLYFLLPESLQFDVSFTQSLLFSILFV TCTTYILLKFMDEI >Mature_254_residues MNLEQIFQNVIINRQEINSIEFEKENIEIPLYPGGEQTFEILITNYGSPTHIHLSVSDELKGQITFLRDNPYVLQKEYVS AVARIPQDGRVLTNGQIFITAGYGSKKKSFPVQLGKVEAKTQEPQKDELDKWEEESEELRPSRPFVAEPAKKASRSRMSG GSGFGGISASAFKNFRGGFPASSGKRTRKGTGENERFPLILALGGFLLLVSSFLLYFLLPESLQFDVSFTQSLLFSILFV TCTTYILLKFMDEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28523; Mature: 28523
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEQIFQNVIINRQEINSIEFEKENIEIPLYPGGEQTFEILITNYGSPTHIHLSVSDEL CCHHHHHHHHHCCHHHCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCC KGQITFLRDNPYVLQKEYVSAVARIPQDGRVLTNGQIFITAGYGSKKKSFPVQLGKVEAK CCEEEEEECCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCCCCEEECCEECC TQEPQKDELDKWEEESEELRPSRPFVAEPAKKASRSRMSGGSGFGGISASAFKNFRGGFP CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC ASSGKRTRKGTGENERFPLILALGGFLLLVSSFLLYFLLPESLQFDVSFTQSLLFSILFV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHH TCTTYILLKFMDEI HHHHHHHHHHHHCC >Mature Secondary Structure MNLEQIFQNVIINRQEINSIEFEKENIEIPLYPGGEQTFEILITNYGSPTHIHLSVSDEL CCHHHHHHHHHCCHHHCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCC KGQITFLRDNPYVLQKEYVSAVARIPQDGRVLTNGQIFITAGYGSKKKSFPVQLGKVEAK CCEEEEEECCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCCCCEEECCEECC TQEPQKDELDKWEEESEELRPSRPFVAEPAKKASRSRMSGGSGFGGISASAFKNFRGGFP CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC ASSGKRTRKGTGENERFPLILALGGFLLLVSSFLLYFLLPESLQFDVSFTQSLLFSILFV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHH TCTTYILLKFMDEI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA