| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is pyrG [H]
Identifier: 21226220
GI number: 21226220
Start: 146550
End: 148154
Strand: Reverse
Name: pyrG [H]
Synonym: MM_0118
Alternate gene names: 21226220
Gene position: 148154-146550 (Counterclockwise)
Preceding gene: 21226221
Following gene: 21226219
Centisome position: 3.62
GC content: 48.04
Gene sequence:
>1605_bases ATGAAGTATATCGTAGTTACCGGTGGGGTGATGAGCGGGCTTGGGAAAGGCATCACCATCGCGTCCATCGGCAGAAACCT GAAAAATAAAGGTTATAAAGTTACGGCTATCAAGATCGACCCTTACATCAATATCGATGCAGGTACCATGAGCCCTTACC AGCACGGGGAAGTTTTTGTGCTCAGGGACGGAGGCGAAGTTGACCTGGATCTCGGAAACTACGAGAGGTTCCTTGACACG GAACTCACCAGGGACCACAACATAACAACTGGCAAGGTTTATCAGGAAGTGATCGCCAAAGAAAGGAGGGGAGACTACCT CGGAAAAACCGTCCAGATTATTCCTCACATTACAAATGAGATCAAAAATAAAATAAGAAAAGTTGCAGCAAGGAGCGGGG CTGATGTCTGTCTTATTGAGATAGGAGGGACTGTAGGAGACATTGAGAGCATGCCTTTCCTTGAAGCAGTCCGCCAGATG CACAGGGAAGAACCTTCGGAAAACATTGTTTTTATCCATGTGACCCTTGTAATGGAAGATTTGCAGGGAGAACAGAAGAC CAAACCTACGCAGCACTCGGTGAAAGAACTCCGGGCACTTGGGCTGAGCCCCGAAGTGATAGTTACAAGGTCAAAGACTC CCCTCCAGGAAAGCGCCAAGGAAAAAATTGCCTTATTCTGTGATGTTCCCCAGGAGCTGGTTATCAGCGCCCATGATGCC GGCGACATTTACGAAGTGCCTCTTGAGATCGAGGAGCAGGGACTGACCACCCAGCTTATGAAGCACCTGAGGCTGGAGTC CGGTGTTGATGATGGTGGCTGGAGAGAAATGGTTGCAAGGATGAAGTCCACAACCGACGAGGTAAAGCTGGCAATCGTGG GCAAATATACAAATCTCGAAGATTCCTATCTCAGCATCCTTGAAGCTGTAAAGCACGGAGGAATTGATAACGCGTGCAGG GTTGAAGTCAACATGGTTGAAGCTGAGACCCTTGAAGAAGACCTGGTAGAAGTTGAAAAACTAAAACAGTATGATGGCAT CCTGATTCCAGGCGGCTTCGGAGGCCGTGGAACTGAAGGGAAGATGCTTGCAATTAAATTTGCCAGGGAAAACGACATCC CGTTCCTTGGAATCTGCCTGGGTATGCAGCTTGCGGTAATTGAGTTTGCAAGAAATGTGGCAAACCTTGAAAACGCAAAC AGCACGGAGTTTGATGAAGATACTCCTTACCCTGTGATTGATATCCTCCCGGAACAGACCGGAGTTGCGGATATGGGAGG CACCATGCGTCTTGGGGACTATGATGCTATCCTGAAAGAAGGCTCCTTTGCCACAAAGCTCTATGGGACCAATTATATTG TTGAGCGTCACCGCCACAGGTATGAAGTAAACCCCGAATTCGTGGACAGGCTTGAATCCTTTGGCATAGTGTTTTCCGGC AAAAATAAAAATAGAATGGAAATTGCCGAAATCCCAGGAAAACGATTTTTCTTTGCCTCCCAGTTCCACCCTGAGTTCAA GTCGAGACCAGGCAGGCCGTCTCCTCCATTTAAAGGGCTCGTCAGGGCAATGTGTAAATACAGGAAGGAAAGAGAAGTTC AGTAA
Upstream 100 bases:
>100_bases AATTGTATAAGTTACACTTCTAAGTACTTTTTAATCTGACATTTACAGGACTGTATTCAGTCCGGAATTCTTATTAGAAA ATTATCGAGGAAGCTTACCC
Downstream 100 bases:
>100_bases GGACAGCATTTGCTGGATGACTCCGGAACTTTATAAAAACGTCAGTTTCCCTTTCTCGGGAAACTGATAAATAGTTTTAA AAATGAAATTAATGGGTTAA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 534; Mature: 534
Protein sequence:
>534_residues MKYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLRDGGEVDLDLGNYERFLDT ELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNEIKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQM HREEPSENIVFIHVTLVMEDLQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDA GDIYEVPLEIEEQGLTTQLMKHLRLESGVDDGGWREMVARMKSTTDEVKLAIVGKYTNLEDSYLSILEAVKHGGIDNACR VEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEGKMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENAN STEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSG KNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMCKYRKEREVQ
Sequences:
>Translated_534_residues MKYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLRDGGEVDLDLGNYERFLDT ELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNEIKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQM HREEPSENIVFIHVTLVMEDLQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDA GDIYEVPLEIEEQGLTTQLMKHLRLESGVDDGGWREMVARMKSTTDEVKLAIVGKYTNLEDSYLSILEAVKHGGIDNACR VEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEGKMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENAN STEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSG KNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMCKYRKEREVQ >Mature_534_residues MKYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLRDGGEVDLDLGNYERFLDT ELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNEIKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQM HREEPSENIVFIHVTLVMEDLQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDA GDIYEVPLEIEEQGLTTQLMKHLRLESGVDDGGWREMVARMKSTTDEVKLAIVGKYTNLEDSYLSILEAVKHGGIDNACR VEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEGKMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENAN STEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSG KNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMCKYRKEREVQ
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI28559085, Length=547, Percent_Identity=51.9195612431444, Blast_Score=542, Evalue=1e-154, Organism=Homo sapiens, GI28559083, Length=547, Percent_Identity=51.9195612431444, Blast_Score=542, Evalue=1e-154, Organism=Homo sapiens, GI221316689, Length=547, Percent_Identity=51.9195612431444, Blast_Score=542, Evalue=1e-154, Organism=Homo sapiens, GI148491070, Length=547, Percent_Identity=52.4680073126143, Blast_Score=541, Evalue=1e-154, Organism=Escherichia coli, GI1789142, Length=546, Percent_Identity=48.5347985347985, Blast_Score=510, Evalue=1e-146, Organism=Caenorhabditis elegans, GI25148299, Length=603, Percent_Identity=41.9568822553897, Blast_Score=464, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322563, Length=560, Percent_Identity=50.3571428571429, Blast_Score=520, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6319432, Length=557, Percent_Identity=50.2692998204668, Blast_Score=511, Evalue=1e-146, Organism=Drosophila melanogaster, GI24664469, Length=547, Percent_Identity=50.6398537477148, Blast_Score=526, Evalue=1e-149, Organism=Drosophila melanogaster, GI21357815, Length=492, Percent_Identity=48.3739837398374, Blast_Score=446, Evalue=1e-125,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59719; Mature: 59719
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFV CEEEEEECHHHHHCCCCCCHHHHCCHHHCCCEEEEEEEECCEEEECCCCCCCCCCCCEEE LRDGGEVDLDLGNYERFLDTELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNE EECCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQMHREEPSENIVFIHVTLVMED HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEHH LQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDA HCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCEEEEEECCCHHHEEEECCC GDIYEVPLEIEEQGLTTQLMKHLRLESGVDDGGWREMVARMKSTTDEVKLAIVGKYTNLE CCEEECCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCC DSYLSILEAVKHGGIDNACRVEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEG HHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC KMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENANSTEFDEDTPYPVIDILPEQT CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC GVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSG CCCCCCCCEEECCHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCEEEEC KNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMCKYRKEREVQ CCCCCEEHEECCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFV CEEEEEECHHHHHCCCCCCHHHHCCHHHCCCEEEEEEEECCEEEECCCCCCCCCCCCEEE LRDGGEVDLDLGNYERFLDTELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNE EECCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQMHREEPSENIVFIHVTLVMED HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEHH LQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDA HCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCEEEEEECCCHHHEEEECCC GDIYEVPLEIEEQGLTTQLMKHLRLESGVDDGGWREMVARMKSTTDEVKLAIVGKYTNLE CCEEECCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCC DSYLSILEAVKHGGIDNACRVEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEG HHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC KMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENANSTEFDEDTPYPVIDILPEQT CEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC GVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSG CCCCCCCCEEECCHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCEEEEC KNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMCKYRKEREVQ CCCCCEEHEECCCCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]