| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226219
Identifier: 21226219
GI number: 21226219
Start: 144677
End: 145180
Strand: Reverse
Name: 21226219
Synonym: MM_0117
Alternate gene names: NA
Gene position: 145180-144677 (Counterclockwise)
Preceding gene: 21226220
Following gene: 21226218
Centisome position: 3.54
GC content: 37.3
Gene sequence:
>504_bases TTGATATTTGTTCCAATTATAGGATGGCTTGCACTTTTCGGCTATGGTGTAAGGCTTGTTAATGAGTTTATTGAAGGTCG ATATGAAGGACCAATAAAACTGGATTTTATGGAAGACCTGAAGTTTGGATTTATGGTTTTCCTGAAGTCTCTCCCCTTCT ATATCATATATATAATCATATTGTTTGCTGCAATGTATGTGAGTGAAGGTTTGGGGAACATTATCAGCCTGCTTTTAGGG TTCTTTGTGGTCCCTATGCTTGCCGTTAACTTCTTCAGGAAACAAACTGTTGAATCTTTCTTTGAGTTTAGTGTCCTGAA TGTTGTCAGGGATAACCTCGGAGAATATATCATTACAGTGCTGAAACAGTATGCTCTTGTTATCATATTTATGGTCCTTT CAATAGTACTTGTGGGCATACCTGGAATGCTTTTCACGAATTCAATATTTGTTGCAAACATGTACGGAAGATTAGTGGAA AGAAAAGCAGAAGCCAGTCTGTAA
Upstream 100 bases:
>100_bases AAAAATAGGGATATAGTCGGTGATAATTATAGAAACTATAAGTTTTTCAGAAGCTTTTAAATATCCTTTTAAAACTCCGA AAAGGCTCCTTTATGCGCTC
Downstream 100 bases:
>100_bases AGGTTGGAGTAAGATCATATAAGTTTCATAATATTGGTTTCCAGCCAGATTTTCTGGCATGGACATTTTTACCTTTTTTG AATATTTTTTTGCTTTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIFVPIIGWLALFGYGVRLVNEFIEGRYEGPIKLDFMEDLKFGFMVFLKSLPFYIIYIIILFAAMYVSEGLGNIISLLLG FFVVPMLAVNFFRKQTVESFFEFSVLNVVRDNLGEYIITVLKQYALVIIFMVLSIVLVGIPGMLFTNSIFVANMYGRLVE RKAEASL
Sequences:
>Translated_167_residues MIFVPIIGWLALFGYGVRLVNEFIEGRYEGPIKLDFMEDLKFGFMVFLKSLPFYIIYIIILFAAMYVSEGLGNIISLLLG FFVVPMLAVNFFRKQTVESFFEFSVLNVVRDNLGEYIITVLKQYALVIIFMVLSIVLVGIPGMLFTNSIFVANMYGRLVE RKAEASL >Mature_167_residues MIFVPIIGWLALFGYGVRLVNEFIEGRYEGPIKLDFMEDLKFGFMVFLKSLPFYIIYIIILFAAMYVSEGLGNIISLLLG FFVVPMLAVNFFRKQTVESFFEFSVLNVVRDNLGEYIITVLKQYALVIIFMVLSIVLVGIPGMLFTNSIFVANMYGRLVE RKAEASL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19072; Mature: 19072
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFVPIIGWLALFGYGVRLVNEFIEGRYEGPIKLDFMEDLKFGFMVFLKSLPFYIIYIII CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LFAAMYVSEGLGNIISLLLGFFVVPMLAVNFFRKQTVESFFEFSVLNVVRDNLGEYIITV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQYALVIIFMVLSIVLVGIPGMLFTNSIFVANMYGRLVERKAEASL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFVPIIGWLALFGYGVRLVNEFIEGRYEGPIKLDFMEDLKFGFMVFLKSLPFYIIYIII CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LFAAMYVSEGLGNIISLLLGFFVVPMLAVNFFRKQTVESFFEFSVLNVVRDNLGEYIITV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQYALVIIFMVLSIVLVGIPGMLFTNSIFVANMYGRLVERKAEASL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA